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The map label for this gene is ydcM [C]

Identifier: 15922326

GI number: 15922326

Start: 2022659

End: 2023807

Strand: Reverse

Name: ydcM [C]

Synonym: ST2008

Alternate gene names: 15922326

Gene position: 2023807-2022659 (Counterclockwise)

Preceding gene: 15922331

Following gene: 15922324

Centisome position: 75.1

GC content: 40.73

Gene sequence:

>1149_bases
ATGGCTAGGAGGGTTAAAGCGATCAGAGCTACTGTTTCGATGAAGATCGCCCTATCTGAACCCCTCCTAGCTCTTGTGAA
TAACTACGTTAAGGCACTACGTTATTCGTTGTTTTGGTTGAAAGAAAATGTGAAAAATCCGGAAGAGAAGGGTGTGTTAG
GAAGAGTCCATGAGGAGTTATATGATAAGTTAAGAGGGGAATACAATCTACCATCAAAGGTTGCTGAGGACTGTTATAGG
GATGCACTCTCAGTATACAAGGGTTGGTATAATAACCCAAGGAGGGGTAGGTTTCCTAGAGTGTATAAGCCGACTGTATG
GTTAACACCAAAAGCAAGTTATAACATAGATTTTAACAAGATGGTGGCTAGGATTGCTGGTGTCGGTGAGCTCCCAATCC
TTGGTTATCCTAGAAACATTAAGGACTACATGGACTGGAAGATGAAGGAGGCAAGGTTGGTAATCAAGGGTGATAAAGCG
TTTCTTAAAGTGGTTTTTGAGAAAAAGAAAGTAAAAATTCAACCTAGGGGTAGTGTTGCTGTTGATATTAACATGAATGA
GATTGTTGTTGGTAAGGATGATACTCGTTATGTTAGGATTTCTACACGCCTTCATGAGGTTCATCATTGGAAGTCTTTAG
CTGAAGTTCTGCAGAGAAAGTACCCTAAGAGGTGGAGGGTGAATAAGAGAATTCTTGTAAGGATTAAGTACTTCTACTCT
AAGGCTAAGCGAATCATGGAGGATTTTGCTAGAAAGGTTGGGAAGTGGGTTGTTGAGGTTGCAGAGGATTTTGGTGCTAA
TGTTATTAAGTTAGAGAACCTCAAGAATTTGATTAAACATGTTAATAAATTACCATCTGAGTTTAGGGATAAACTGTATT
TGATGCAATACCGTCGTGTTCAGTATTGGATTGAGTGGCAGGCTAAGAAACACGGCTTGTTGGTTGTGTATGTTAATCCT
CACTATTCTTCTGTCTCTTGCCCTAAGTGTGGTAAAAAGATGAAAGAAGTAGGTTATAGGTACTTCAGCTGTCCGTCTTG
TGGTTATGAGAATGATAGGGATGTTATTGGAATTATGAATCTTAACAGGAGGGGGTCTCTGACCCTCTCGTCTGCCCCTC
AAATGAGGGATGTAGTCCCGAACCGATGA

Upstream 100 bases:

>100_bases
AAAAAAATGGGGTTAAGGGGGCGGAAAGCCTTGCCTCTCTGAGGCGGGAATGGATAGCCCCTTATAAAGTTTAAATATTA
GCTCTTTTAATTTTCTCCTA

Downstream 100 bases:

>100_bases
GGGGAACCCTCGCCCTTCAGGGCGGGGATGAAGTCAGTCCTTATCGACCAACCTATTATAAAACCCAGAGCTCATTTAAA
GAATCGAAATTAATAATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MARRVKAIRATVSMKIALSEPLLALVNNYVKALRYSLFWLKENVKNPEEKGVLGRVHEELYDKLRGEYNLPSKVAEDCYR
DALSVYKGWYNNPRRGRFPRVYKPTVWLTPKASYNIDFNKMVARIAGVGELPILGYPRNIKDYMDWKMKEARLVIKGDKA
FLKVVFEKKKVKIQPRGSVAVDINMNEIVVGKDDTRYVRISTRLHEVHHWKSLAEVLQRKYPKRWRVNKRILVRIKYFYS
KAKRIMEDFARKVGKWVVEVAEDFGANVIKLENLKNLIKHVNKLPSEFRDKLYLMQYRRVQYWIEWQAKKHGLLVVYVNP
HYSSVSCPKCGKKMKEVGYRYFSCPSCGYENDRDVIGIMNLNRRGSLTLSSAPQMRDVVPNR

Sequences:

>Translated_382_residues
MARRVKAIRATVSMKIALSEPLLALVNNYVKALRYSLFWLKENVKNPEEKGVLGRVHEELYDKLRGEYNLPSKVAEDCYR
DALSVYKGWYNNPRRGRFPRVYKPTVWLTPKASYNIDFNKMVARIAGVGELPILGYPRNIKDYMDWKMKEARLVIKGDKA
FLKVVFEKKKVKIQPRGSVAVDINMNEIVVGKDDTRYVRISTRLHEVHHWKSLAEVLQRKYPKRWRVNKRILVRIKYFYS
KAKRIMEDFARKVGKWVVEVAEDFGANVIKLENLKNLIKHVNKLPSEFRDKLYLMQYRRVQYWIEWQAKKHGLLVVYVNP
HYSSVSCPKCGKKMKEVGYRYFSCPSCGYENDRDVIGIMNLNRRGSLTLSSAPQMRDVVPNR
>Mature_381_residues
ARRVKAIRATVSMKIALSEPLLALVNNYVKALRYSLFWLKENVKNPEEKGVLGRVHEELYDKLRGEYNLPSKVAEDCYRD
ALSVYKGWYNNPRRGRFPRVYKPTVWLTPKASYNIDFNKMVARIAGVGELPILGYPRNIKDYMDWKMKEARLVIKGDKAF
LKVVFEKKKVKIQPRGSVAVDINMNEIVVGKDDTRYVRISTRLHEVHHWKSLAEVLQRKYPKRWRVNKRILVRIKYFYSK
AKRIMEDFARKVGKWVVEVAEDFGANVIKLENLKNLIKHVNKLPSEFRDKLYLMQYRRVQYWIEWQAKKHGLLVVYVNPH
YSSVSCPKCGKKMKEVGYRYFSCPSCGYENDRDVIGIMNLNRRGSLTLSSAPQMRDVVPNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transposase 35 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001959
- InterPro:   IPR010095 [H]

Pfam domain/function: PF01385 Transposase_2; PF07282 Transposase_35 [H]

EC number: NA

Molecular weight: Translated: 44945; Mature: 44814

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRVKAIRATVSMKIALSEPLLALVNNYVKALRYSLFWLKENVKNPEEKGVLGRVHEEL
CCCHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHH
YDKLRGEYNLPSKVAEDCYRDALSVYKGWYNNPRRGRFPRVYKPTVWLTPKASYNIDFNK
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCEEEECCCCCCCCCHHH
MVARIAGVGELPILGYPRNIKDYMDWKMKEARLVIKGDKAFLKVVFEKKKVKIQPRGSVA
HHHHHHCCCCCCCCCCCCCHHHHHCCHHCCCEEEEECCHHHHHHHHHHHHEEECCCCCEE
VDINMNEIVVGKDDTRYVRISTRLHEVHHWKSLAEVLQRKYPKRWRVNKRILVRIKYFYS
EEECCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEHHHHHH
KAKRIMEDFARKVGKWVVEVAEDFGANVIKLENLKNLIKHVNKLPSEFRDKLYLMQYRRV
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QYWIEWQAKKHGLLVVYVNPHYSSVSCPKCGKKMKEVGYRYFSCPSCGYENDRDVIGIMN
HEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCEEEEEE
LNRRGSLTLSSAPQMRDVVPNR
CCCCCCEEECCCCHHHHCCCCC
>Mature Secondary Structure 
ARRVKAIRATVSMKIALSEPLLALVNNYVKALRYSLFWLKENVKNPEEKGVLGRVHEEL
CCHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHH
YDKLRGEYNLPSKVAEDCYRDALSVYKGWYNNPRRGRFPRVYKPTVWLTPKASYNIDFNK
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCEEEECCCCCCCCCHHH
MVARIAGVGELPILGYPRNIKDYMDWKMKEARLVIKGDKAFLKVVFEKKKVKIQPRGSVA
HHHHHHCCCCCCCCCCCCCHHHHHCCHHCCCEEEEECCHHHHHHHHHHHHEEECCCCCEE
VDINMNEIVVGKDDTRYVRISTRLHEVHHWKSLAEVLQRKYPKRWRVNKRILVRIKYFYS
EEECCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEHHHHHH
KAKRIMEDFARKVGKWVVEVAEDFGANVIKLENLKNLIKHVNKLPSEFRDKLYLMQYRRV
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QYWIEWQAKKHGLLVVYVNPHYSSVSCPKCGKKMKEVGYRYFSCPSCGYENDRDVIGIMN
HEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCEEEEEE
LNRRGSLTLSSAPQMRDVVPNR
CCCCCCEEECCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]