| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15922241
Identifier: 15922241
GI number: 15922241
Start: 1935647
End: 1936708
Strand: Direct
Name: 15922241
Synonym: ST1926
Alternate gene names: NA
Gene position: 1935647-1936708 (Clockwise)
Preceding gene: 15922240
Following gene: 15922243
Centisome position: 71.83
GC content: 36.91
Gene sequence:
>1062_bases ATGAAAGATGAGAAGATAAACATCGTGCTAAGAATCCTTTGGAAAGGAGGAGTTACTAGAGTTGCGGTTGAAGAAGCCAG AAATATGAAAAGCACACTAATAGTTTACAGACATGCCGGGACACAATATGACTTATCTAACATAGATGTGAAAGTCCTTT TTGACGGTAAATCTAAGTGGATTTTTAAAGTGTTAACATCTATTTATGCAGGTCAGAGGGGAGACGAGGCCACAGTAGAC TTAGACAGAATCATAAAAGCCAGTGATATAATTAAAGGACCCGCATTATTTCACGATCAATTCGCCGGGTTAACGGGGTA TTTAAGGAAAATAAAACACGGAGAAGATTACGCAATTTACATTCACGAAACCTCTTTTGATAACAAAGGAATAAAATGGG CTTTACCCAAATTTATGGAGAAAAAAATTTTAGAGAAGAGCAAATTAATAATCACGAACAGTAAATGGAACAAAGAGATC TTAGCTAGTAAGGGCTTTAGCGCTGAAGTAGTATATCCCGGTTGTTACCCCAGAGAGAGGATAAATCTTGAGAGAGAAAA GATTGTCTTGGCAGTTTCAGTATGGGATTCTGGAAGAAGGCCCGAGATTTACGGGGAGATTAGTAAAAAAATTAAGGGAA AACTGGTAATGGCGGGATATTGGACTAGACAAGACACATTAAACGAATTCATGAGTAAATATAAGGAGGTAATAATAACC GGGCCTATTTCAGAGAGTAAACTGCAAGAACTTTATGATAAAGCCTCAGTGCTAATACGATTCGGTTTTAATGAAAAAGG GCCCGGTATGGGAGTTTTAGAAGCTATGGGGGCTGGAATGCCCGTAATAGTAAATGAGGGTTTAGGTAGTAAGGAACTAA TAAAAGATAACGGATATGTGGTAAGAGATTGGGATGAAGCTGTGGATAGAATAAATGAGATATTGGAAGATGAAAGTCTA AGGAAGAAAATGAGCATTAACTCTTGGGAAATTGCTAAAAGCTTGAGTTGGACTAACCATGCTAGAAAATTATATGAATT GTTAATGAAAATATATGAGTAA
Upstream 100 bases:
>100_bases ATATTGTCTTGCCTTATAAGCTCTGATAAAGTATAAAACATCCAACAACAACACAGTAAGTAAGAAAAATAATAAATAAC TAAAATCTCAGTTAAGCATA
Downstream 100 bases:
>100_bases ATGAAAGTGAAATACACTAGTTTAGATAATAATTTGACCATGCTTCGTGGAATTCAATTTTCTAGGTTTTAAGTCTTAAA TTTTTGTAAATCAAGCATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MKDEKINIVLRILWKGGVTRVAVEEARNMKSTLIVYRHAGTQYDLSNIDVKVLFDGKSKWIFKVLTSIYAGQRGDEATVD LDRIIKASDIIKGPALFHDQFAGLTGYLRKIKHGEDYAIYIHETSFDNKGIKWALPKFMEKKILEKSKLIITNSKWNKEI LASKGFSAEVVYPGCYPRERINLEREKIVLAVSVWDSGRRPEIYGEISKKIKGKLVMAGYWTRQDTLNEFMSKYKEVIIT GPISESKLQELYDKASVLIRFGFNEKGPGMGVLEAMGAGMPVIVNEGLGSKELIKDNGYVVRDWDEAVDRINEILEDESL RKKMSINSWEIAKSLSWTNHARKLYELLMKIYE
Sequences:
>Translated_353_residues MKDEKINIVLRILWKGGVTRVAVEEARNMKSTLIVYRHAGTQYDLSNIDVKVLFDGKSKWIFKVLTSIYAGQRGDEATVD LDRIIKASDIIKGPALFHDQFAGLTGYLRKIKHGEDYAIYIHETSFDNKGIKWALPKFMEKKILEKSKLIITNSKWNKEI LASKGFSAEVVYPGCYPRERINLEREKIVLAVSVWDSGRRPEIYGEISKKIKGKLVMAGYWTRQDTLNEFMSKYKEVIIT GPISESKLQELYDKASVLIRFGFNEKGPGMGVLEAMGAGMPVIVNEGLGSKELIKDNGYVVRDWDEAVDRINEILEDESL RKKMSINSWEIAKSLSWTNHARKLYELLMKIYE >Mature_353_residues MKDEKINIVLRILWKGGVTRVAVEEARNMKSTLIVYRHAGTQYDLSNIDVKVLFDGKSKWIFKVLTSIYAGQRGDEATVD LDRIIKASDIIKGPALFHDQFAGLTGYLRKIKHGEDYAIYIHETSFDNKGIKWALPKFMEKKILEKSKLIITNSKWNKEI LASKGFSAEVVYPGCYPRERINLEREKIVLAVSVWDSGRRPEIYGEISKKIKGKLVMAGYWTRQDTLNEFMSKYKEVIIT GPISESKLQELYDKASVLIRFGFNEKGPGMGVLEAMGAGMPVIVNEGLGSKELIKDNGYVVRDWDEAVDRINEILEDESL RKKMSINSWEIAKSLSWTNHARKLYELLMKIYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40413; Mature: 40413
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDEKINIVLRILWKGGVTRVAVEEARNMKSTLIVYRHAGTQYDLSNIDVKVLFDGKSKW CCCCCEEEEEEEEECCCCCEEHHHHHHCCCEEEEEEEECCCEEECCCCEEEEEECCCCHH IFKVLTSIYAGQRGDEATVDLDRIIKASDIIKGPALFHDQFAGLTGYLRKIKHGEDYAIY HHHHHHHHHCCCCCCCCEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE IHETSFDNKGIKWALPKFMEKKILEKSKLIITNSKWNKEILASKGFSAEVVYPGCYPRER EEECCCCCCCCEEHHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCEEEEECCCCCHHH INLEREKIVLAVSVWDSGRRPEIYGEISKKIKGKLVMAGYWTRQDTLNEFMSKYKEVIIT CCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHEEEE GPISESKLQELYDKASVLIRFGFNEKGPGMGVLEAMGAGMPVIVNEGLGSKELIKDNGYV CCCCHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHCCCCCEEEECCCCCHHHCCCCCEE VRDWDEAVDRINEILEDESLRKKMSINSWEIAKSLSWTNHARKLYELLMKIYE EECHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKDEKINIVLRILWKGGVTRVAVEEARNMKSTLIVYRHAGTQYDLSNIDVKVLFDGKSKW CCCCCEEEEEEEEECCCCCEEHHHHHHCCCEEEEEEEECCCEEECCCCEEEEEECCCCHH IFKVLTSIYAGQRGDEATVDLDRIIKASDIIKGPALFHDQFAGLTGYLRKIKHGEDYAIY HHHHHHHHHCCCCCCCCEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE IHETSFDNKGIKWALPKFMEKKILEKSKLIITNSKWNKEILASKGFSAEVVYPGCYPRER EEECCCCCCCCEEHHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCEEEEECCCCCHHH INLEREKIVLAVSVWDSGRRPEIYGEISKKIKGKLVMAGYWTRQDTLNEFMSKYKEVIIT CCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHEEEE GPISESKLQELYDKASVLIRFGFNEKGPGMGVLEAMGAGMPVIVNEGLGSKELIKDNGYV CCCCHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHCCCCCEEEECCCCCHHHCCCCCEE VRDWDEAVDRINEILEDESLRKKMSINSWEIAKSLSWTNHARKLYELLMKIYE EECHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA