Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

Click here to switch to the map view.

The map label for this gene is 15922238

Identifier: 15922238

GI number: 15922238

Start: 1932636

End: 1933385

Strand: Direct

Name: 15922238

Synonym: ST1923

Alternate gene names: NA

Gene position: 1932636-1933385 (Clockwise)

Preceding gene: 15922237

Following gene: 15922239

Centisome position: 71.72

GC content: 27.2

Gene sequence:

>750_bases
GTGGTAAAGATAAAGCTATTAACCCCTAGCTTATCTAGTGACTTCAATAGAGTGAAAAAAGAACTAAATAAGTATAACAT
TAAAATTTCGGAATCTAAAGATCAAAACGAGAATATTGACGCTTTAATATTTATTCTAGATGGTGAAAGAGACTTTAGAG
TAATATTAACTATGGCAGCTATTGTATTAAATTGTAATAAAACTTTAGCATTTACAAAAACTTCGTATTTAGGAACAACT
GGTATAGATAATTGGAATACGGTACTTAATAAGCTTAAGCAAGATGAGAGTGATATTTACAAACGAGCTAAGGTAATAGT
TTTTATAGGTGATATAGACAACCAGCGTAAGTATGAAAATTTAATGAGCACTTTAGGGAATAACATCAAGGAAGATATTG
ACGGGGTTTATATTTTTCATGATGGTGATAAAATTGTCATTATTACTTATAATGGTGATTTAAATGATAATAGATTTTCA
TCACATGAGATAGAAGAAGATATTATAAAATTCCTAAAAGGAATCAATGAGCCTAAGGTCAATGAACGTATTTCAATGCT
AAGAAATATTGTTGATGCAAAAGATTTTTATGATAAATTAAACAAAAATTTTAGGAATTTCAGATTAGGCTCTGAACTTT
TTGATAACTTAGATAAACTTTTGATATATTTAATGATAAGACATAAGGAACATTGTAGAAAATCATTTTATAGATTAGAT
CATACATTAAGACTTATAGCCAATCCTTAA

Upstream 100 bases:

>100_bases
ATAGATAAGGATGGTATATTAAGGGTAAAAGAAATACAGGATCTTGAGGAATATTTAAAGTTAGGTTTAGATCCTAGAGC
AATAATTAGGGCGATAGGTA

Downstream 100 bases:

>100_bases
GATACATGGAAATTGTTCAATATATTTAATAGATGGTAGTTGTGCAATCGAAATAGACACGCAAGAGCTTATTCTCTTTT
CCGATTTCGAGTTAACATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MVKIKLLTPSLSSDFNRVKKELNKYNIKISESKDQNENIDALIFILDGERDFRVILTMAAIVLNCNKTLAFTKTSYLGTT
GIDNWNTVLNKLKQDESDIYKRAKVIVFIGDIDNQRKYENLMSTLGNNIKEDIDGVYIFHDGDKIVIITYNGDLNDNRFS
SHEIEEDIIKFLKGINEPKVNERISMLRNIVDAKDFYDKLNKNFRNFRLGSELFDNLDKLLIYLMIRHKEHCRKSFYRLD
HTLRLIANP

Sequences:

>Translated_249_residues
MVKIKLLTPSLSSDFNRVKKELNKYNIKISESKDQNENIDALIFILDGERDFRVILTMAAIVLNCNKTLAFTKTSYLGTT
GIDNWNTVLNKLKQDESDIYKRAKVIVFIGDIDNQRKYENLMSTLGNNIKEDIDGVYIFHDGDKIVIITYNGDLNDNRFS
SHEIEEDIIKFLKGINEPKVNERISMLRNIVDAKDFYDKLNKNFRNFRLGSELFDNLDKLLIYLMIRHKEHCRKSFYRLD
HTLRLIANP
>Mature_249_residues
MVKIKLLTPSLSSDFNRVKKELNKYNIKISESKDQNENIDALIFILDGERDFRVILTMAAIVLNCNKTLAFTKTSYLGTT
GIDNWNTVLNKLKQDESDIYKRAKVIVFIGDIDNQRKYENLMSTLGNNIKEDIDGVYIFHDGDKIVIITYNGDLNDNRFS
SHEIEEDIIKFLKGINEPKVNERISMLRNIVDAKDFYDKLNKNFRNFRLGSELFDNLDKLLIYLMIRHKEHCRKSFYRLD
HTLRLIANP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29135; Mature: 29135

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKIKLLTPSLSSDFNRVKKELNKYNIKISESKDQNENIDALIFILDGERDFRVILTMAA
CEEEEEECCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHH
IVLNCNKTLAFTKTSYLGTTGIDNWNTVLNKLKQDESDIYKRAKVIVFIGDIDNQRKYEN
HHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHEEEEEEEECCCCHHHHHH
LMSTLGNNIKEDIDGVYIFHDGDKIVIITYNGDLNDNRFSSHEIEEDIIKFLKGINEPKV
HHHHHCCHHHHHCCEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCH
NERISMLRNIVDAKDFYDKLNKNFRNFRLGSELFDNLDKLLIYLMIRHKEHCRKSFYRLD
HHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HTLRLIANP
HHHEEEECC
>Mature Secondary Structure
MVKIKLLTPSLSSDFNRVKKELNKYNIKISESKDQNENIDALIFILDGERDFRVILTMAA
CEEEEEECCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHH
IVLNCNKTLAFTKTSYLGTTGIDNWNTVLNKLKQDESDIYKRAKVIVFIGDIDNQRKYEN
HHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHEEEEEEEECCCCHHHHHH
LMSTLGNNIKEDIDGVYIFHDGDKIVIITYNGDLNDNRFSSHEIEEDIIKFLKGINEPKV
HHHHHCCHHHHHCCEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCH
NERISMLRNIVDAKDFYDKLNKNFRNFRLGSELFDNLDKLLIYLMIRHKEHCRKSFYRLD
HHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HTLRLIANP
HHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA