| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is ypfI [C]
Identifier: 15922227
GI number: 15922227
Start: 1914794
End: 1916971
Strand: Reverse
Name: ypfI [C]
Synonym: ST1912
Alternate gene names: 15922227
Gene position: 1916971-1914794 (Counterclockwise)
Preceding gene: 15922228
Following gene: 15922226
Centisome position: 71.14
GC content: 32.09
Gene sequence:
>2178_bases ATGAGAGAAGAGTTTCAAAAAGCCTTAGATTTTTATTATAGGCATTTACTTTTCGTAGAAGGGAATAATTTTCTAAATTC TACTTTAGGTTTTTTAAATTCTTTTCTTGAAACTAATAAAAAACCTAGAATAGCTTACGCTTTCCACCCTTGGGTTGACA AGGCAAAGGAGAGATTTGATTTTTTTAAGCAAATCGGATTACCGCTGACAGATATTGACTATTCATCTTCAGAAAAATTT CTTGGGGAGACATTTGACCTAGTAATAATGGATGCTGTAGATGATTTTCGTCCTAATTATATTTCTCGTTTAACTGATAT GGCTAGGGGTGGCGGATTAATTGTCATCTATACTAATGATATATATAAAGACAAGTTGTACAGAAACAGTCTAATAAGAG ATGGGATTGTTGATAGCTTCTTTGAAGATAGGTTTATGAGAAAAATAAGATCATATCAAGGGATAATTTATGTAAAAGAT GAAAAATTAGTAAATTTTAAGAGCGTAAATGTAAATGAATTAAAAAGATCTTCGCTTAAAATCCCATCTAATCCTTCTAT TCCGGTTAAGTTACATAACCTTTGCCTAAGTGAAGATCAAAATAAGGCATTGGAAGAGTCATTATTTATCCTTCATGATG ATAGAAAACGAATTTTAGCTGTGACTGCACCAAGAGGTAGGGGGAAGAGTGCTGTAATAGGGCTTTTCTTATCATATGTT GTTTTCCTAAAATACAGAGAACCTACAGTAATAATCATAACCTCTCCCTCTTATTATTCTTCTTCAGAAATCTTTAGGTT TTTAGCTAAGGGTCTTAAAAGCCTGGGCATAAAATACACCGTTACTAAATCGAGGGATGGAAAAATTATGAGGATTTCAG CTGGAGAAGTGATAGTCAGATGGTTAGCCCCAGATTTAGCCAAAGATTATGATGGTTATTTAATCGTAGTTGATGAAGCA GCAGCTTTAGGAATAGAAACGCTAGAGTATATTATTAGAAAGTGGAACAAGACAATCCTTATAACTACTATTCATGGTTA TGAAGGTTCTGGAAAGGCATTTCTTAAGTATCTTCTATTGATAAAGCAAAAATATCTTTTTAAACACGTTACTTTGGACT TTCCTATAAGATATTCAAAGGGGGATCCGATAGAGAGATTTATTTATGATGTTATGCTCCTGGATGCAGAACCAAAGATA AAGCAGTTAAATAATAGCATAGAAGAAGTTAACAGAGAAGAGCTATTTAAAAATGACGGTAGATTAAGACAAATTTACGG TATTCTTGTCTCAGCTCATTATCGTAATTCTCCAGACGATTTAATGTTGTTAGGCGATTTACATTTTCAGAAGTTATATT CATTAAGTGATGTTTCTCTAGCACAAGTTATATTTGAAGGGGGATTATCGGAAGAGAGAATAAATAGCATTTTAAAGGGA GAGAGCAATTTAGGACATTTAATACCTCACAGAATTATAAAATATGAGAGGTTGAAGGAATTTGGTAAATTGAAAGGTTG GAGAATAATAAGGATTGCTGTATTACCGGAATTACAAGGCAAGGGGCTAGGCTCTAAGTTGCTTTCTCATATTAAGGGTG ATGCAATATCTAATAATTTGGATTGGCTAGGTTCTTCTTTCATCTTAGATATAAGAGTCCTTAATTTTTGGGTAAAAAAT GATTTTACTCCAATCTATCTAGCATCTAGAAAAAATGAAGGTCTAAATGGTTACTCTGTTATAGTTATTTATCCTATTTC TGATAAGGCGAAAGAGCTTGCAAATGTATTATCTTTTAATTTAAAAAGAAAGATAATTAATACTGCTCATCAAGTATATT TTAACGTATCGCCTTTATCATTAGCTAAGCTTTTAGATAGTATTAACGCTTTTAATAAAACCGAGGATTTAAAACCACAA GATATAGATAAGATAAATGCATATTTAGAGGGAATTCTTCCTTATAATTCAGTAGCCGATTCTATTGGTTTGTTAACTAA AAAATATTTTTGGGAAATGCCGATAAAACTAGATTTATTAGAAGAAGCTGTACTAGTTGGCCGAGTACTTCAAGGGAAAA GTTGGTCACATATAAGTTGCAATATAGAAAAATCCCCAAGGGAAACAGAAGAGATACTCAGAAATGCCGTTAATAAACTT ATGAAAGCTTTTATTTAA
Upstream 100 bases:
>100_bases AAAGTATACAATAAGTTGGCTCGTTATAATAGTAGTGATAATCATAATAATTTTAATAGTTGTTGTGGTAGCATTAAGAA GTAGGAGGAAACATTAAAAG
Downstream 100 bases:
>100_bases TGGAGTTAAAATTAAGTATTATGAGACCCATAAGTAAACTAATACTAATGTTCTTTGTAGCTGAGATAATTATATTCTTA ATCTCTTCAGCAATACCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 725; Mature: 725
Protein sequence:
>725_residues MREEFQKALDFYYRHLLFVEGNNFLNSTLGFLNSFLETNKKPRIAYAFHPWVDKAKERFDFFKQIGLPLTDIDYSSSEKF LGETFDLVIMDAVDDFRPNYISRLTDMARGGGLIVIYTNDIYKDKLYRNSLIRDGIVDSFFEDRFMRKIRSYQGIIYVKD EKLVNFKSVNVNELKRSSLKIPSNPSIPVKLHNLCLSEDQNKALEESLFILHDDRKRILAVTAPRGRGKSAVIGLFLSYV VFLKYREPTVIIITSPSYYSSSEIFRFLAKGLKSLGIKYTVTKSRDGKIMRISAGEVIVRWLAPDLAKDYDGYLIVVDEA AALGIETLEYIIRKWNKTILITTIHGYEGSGKAFLKYLLLIKQKYLFKHVTLDFPIRYSKGDPIERFIYDVMLLDAEPKI KQLNNSIEEVNREELFKNDGRLRQIYGILVSAHYRNSPDDLMLLGDLHFQKLYSLSDVSLAQVIFEGGLSEERINSILKG ESNLGHLIPHRIIKYERLKEFGKLKGWRIIRIAVLPELQGKGLGSKLLSHIKGDAISNNLDWLGSSFILDIRVLNFWVKN DFTPIYLASRKNEGLNGYSVIVIYPISDKAKELANVLSFNLKRKIINTAHQVYFNVSPLSLAKLLDSINAFNKTEDLKPQ DIDKINAYLEGILPYNSVADSIGLLTKKYFWEMPIKLDLLEEAVLVGRVLQGKSWSHISCNIEKSPRETEEILRNAVNKL MKAFI
Sequences:
>Translated_725_residues MREEFQKALDFYYRHLLFVEGNNFLNSTLGFLNSFLETNKKPRIAYAFHPWVDKAKERFDFFKQIGLPLTDIDYSSSEKF LGETFDLVIMDAVDDFRPNYISRLTDMARGGGLIVIYTNDIYKDKLYRNSLIRDGIVDSFFEDRFMRKIRSYQGIIYVKD EKLVNFKSVNVNELKRSSLKIPSNPSIPVKLHNLCLSEDQNKALEESLFILHDDRKRILAVTAPRGRGKSAVIGLFLSYV VFLKYREPTVIIITSPSYYSSSEIFRFLAKGLKSLGIKYTVTKSRDGKIMRISAGEVIVRWLAPDLAKDYDGYLIVVDEA AALGIETLEYIIRKWNKTILITTIHGYEGSGKAFLKYLLLIKQKYLFKHVTLDFPIRYSKGDPIERFIYDVMLLDAEPKI KQLNNSIEEVNREELFKNDGRLRQIYGILVSAHYRNSPDDLMLLGDLHFQKLYSLSDVSLAQVIFEGGLSEERINSILKG ESNLGHLIPHRIIKYERLKEFGKLKGWRIIRIAVLPELQGKGLGSKLLSHIKGDAISNNLDWLGSSFILDIRVLNFWVKN DFTPIYLASRKNEGLNGYSVIVIYPISDKAKELANVLSFNLKRKIINTAHQVYFNVSPLSLAKLLDSINAFNKTEDLKPQ DIDKINAYLEGILPYNSVADSIGLLTKKYFWEMPIKLDLLEEAVLVGRVLQGKSWSHISCNIEKSPRETEEILRNAVNKL MKAFI >Mature_725_residues MREEFQKALDFYYRHLLFVEGNNFLNSTLGFLNSFLETNKKPRIAYAFHPWVDKAKERFDFFKQIGLPLTDIDYSSSEKF LGETFDLVIMDAVDDFRPNYISRLTDMARGGGLIVIYTNDIYKDKLYRNSLIRDGIVDSFFEDRFMRKIRSYQGIIYVKD EKLVNFKSVNVNELKRSSLKIPSNPSIPVKLHNLCLSEDQNKALEESLFILHDDRKRILAVTAPRGRGKSAVIGLFLSYV VFLKYREPTVIIITSPSYYSSSEIFRFLAKGLKSLGIKYTVTKSRDGKIMRISAGEVIVRWLAPDLAKDYDGYLIVVDEA AALGIETLEYIIRKWNKTILITTIHGYEGSGKAFLKYLLLIKQKYLFKHVTLDFPIRYSKGDPIERFIYDVMLLDAEPKI KQLNNSIEEVNREELFKNDGRLRQIYGILVSAHYRNSPDDLMLLGDLHFQKLYSLSDVSLAQVIFEGGLSEERINSILKG ESNLGHLIPHRIIKYERLKEFGKLKGWRIIRIAVLPELQGKGLGSKLLSHIKGDAISNNLDWLGSSFILDIRVLNFWVKN DFTPIYLASRKNEGLNGYSVIVIYPISDKAKELANVLSFNLKRKIINTAHQVYFNVSPLSLAKLLDSINAFNKTEDLKPQ DIDKINAYLEGILPYNSVADSIGLLTKKYFWEMPIKLDLLEEAVLVGRVLQGKSWSHISCNIEKSPRETEEILRNAVNKL MKAFI
Specific function: Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP) [H]
COG id: COG1444
COG function: function code R; Predicted P-loop ATPase fused to an acetyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Homo sapiens, GI221316741, Length=806, Percent_Identity=24.1935483870968, Blast_Score=171, Evalue=3e-42, Organism=Homo sapiens, GI221316723, Length=806, Percent_Identity=24.1935483870968, Blast_Score=170, Evalue=4e-42, Organism=Escherichia coli, GI1788818, Length=572, Percent_Identity=25.1748251748252, Blast_Score=152, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17507621, Length=543, Percent_Identity=27.0718232044199, Blast_Score=159, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6324197, Length=564, Percent_Identity=27.4822695035461, Blast_Score=162, Evalue=2e-40, Organism=Drosophila melanogaster, GI24640662, Length=756, Percent_Identity=23.6772486772487, Blast_Score=175, Evalue=8e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR013562 - InterPro: IPR007807 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF08351 DUF1726; PF05127 DUF699 [H]
EC number: NA
Molecular weight: Translated: 83356; Mature: 83356
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREEFQKALDFYYRHLLFVEGNNFLNSTLGFLNSFLETNKKPRIAYAFHPWVDKAKERFD CCHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHH FFKQIGLPLTDIDYSSSEKFLGETFDLVIMDAVDDFRPNYISRLTDMARGGGLIVIYTND HHHHHCCCEECCCCCCCCHHHCCCCCEEEEECHHHCCHHHHHHHHHHHCCCCEEEEEECC IYKDKLYRNSLIRDGIVDSFFEDRFMRKIRSYQGIIYVKDEKLVNFKSVNVNELKRSSLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCHHHHHHHCCC IPSNPSIPVKLHNLCLSEDQNKALEESLFILHDDRKRILAVTAPRGRGKSAVIGLFLSYV CCCCCCCCEEEHHHHHCCCCHHHHHHCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHH VFLKYREPTVIIITSPSYYSSSEIFRFLAKGLKSLGIKYTVTKSRDGKIMRISAGEVIVR HHEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECHHHHHH WLAPDLAKDYDGYLIVVDEAAALGIETLEYIIRKWNKTILITTIHGYEGSGKAFLKYLLL HHCHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHH IKQKYLFKHVTLDFPIRYSKGDPIERFIYDVMLLDAEPKIKQLNNSIEEVNREELFKNDG HHHHHHHHHEEEECEEEECCCCHHHHHHHHHHHCCCCCHHHHHCCHHHHCCHHHHHHCCC RLRQIYGILVSAHYRNSPDDLMLLGDLHFQKLYSLSDVSLAQVIFEGGLSEERINSILKG HHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCC ESNLGHLIPHRIIKYERLKEFGKLKGWRIIRIAVLPELQGKGLGSKLLSHIKGDAISNNL CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCH DWLGSSFILDIRVLNFWVKNDFTPIYLASRKNEGLNGYSVIVIYPISDKAKELANVLSFN HHCCCHHEEEEHEEEHHHCCCCCEEEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHHH LKRKIINTAHQVYFNVSPLSLAKLLDSINAFNKTEDLKPQDIDKINAYLEGILPYNSVAD HHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH SIGLLTKKYFWEMPIKLDLLEEAVLVGRVLQGKSWSHISCNIEKSPRETEEILRNAVNKL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHH MKAFI HHHCC >Mature Secondary Structure MREEFQKALDFYYRHLLFVEGNNFLNSTLGFLNSFLETNKKPRIAYAFHPWVDKAKERFD CCHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHH FFKQIGLPLTDIDYSSSEKFLGETFDLVIMDAVDDFRPNYISRLTDMARGGGLIVIYTND HHHHHCCCEECCCCCCCCHHHCCCCCEEEEECHHHCCHHHHHHHHHHHCCCCEEEEEECC IYKDKLYRNSLIRDGIVDSFFEDRFMRKIRSYQGIIYVKDEKLVNFKSVNVNELKRSSLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCHHHHHHHCCC IPSNPSIPVKLHNLCLSEDQNKALEESLFILHDDRKRILAVTAPRGRGKSAVIGLFLSYV CCCCCCCCEEEHHHHHCCCCHHHHHHCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHH VFLKYREPTVIIITSPSYYSSSEIFRFLAKGLKSLGIKYTVTKSRDGKIMRISAGEVIVR HHEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECHHHHHH WLAPDLAKDYDGYLIVVDEAAALGIETLEYIIRKWNKTILITTIHGYEGSGKAFLKYLLL HHCHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHH IKQKYLFKHVTLDFPIRYSKGDPIERFIYDVMLLDAEPKIKQLNNSIEEVNREELFKNDG HHHHHHHHHEEEECEEEECCCCHHHHHHHHHHHCCCCCHHHHHCCHHHHCCHHHHHHCCC RLRQIYGILVSAHYRNSPDDLMLLGDLHFQKLYSLSDVSLAQVIFEGGLSEERINSILKG HHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCC ESNLGHLIPHRIIKYERLKEFGKLKGWRIIRIAVLPELQGKGLGSKLLSHIKGDAISNNL CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCH DWLGSSFILDIRVLNFWVKNDFTPIYLASRKNEGLNGYSVIVIYPISDKAKELANVLSFN HHCCCHHEEEEHEEEHHHCCCCCEEEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHHH LKRKIINTAHQVYFNVSPLSLAKLLDSINAFNKTEDLKPQDIDKINAYLEGILPYNSVAD HHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH SIGLLTKKYFWEMPIKLDLLEEAVLVGRVLQGKSWSHISCNIEKSPRETEEILRNAVNKL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHH MKAFI HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA