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The map label for this gene is hdrB [H]

Identifier: 15922183

GI number: 15922183

Start: 1882074

End: 1882997

Strand: Reverse

Name: hdrB [H]

Synonym: ST1870

Alternate gene names: 15922183

Gene position: 1882997-1882074 (Counterclockwise)

Preceding gene: 15922184

Following gene: 15922181

Centisome position: 69.88

GC content: 35.28

Gene sequence:

>924_bases
ATGAGTATTAGAATCAATAATCCTTATGGTAAAGTAGCATTCTATCCAGGCTGTTCATTAGACGGTATGGGTAAGCCTTA
TGATGTATCATTAGCGTTAGTTGCTAAGGATTTAGGATTAGAATATGAGAAAATTGAGGATTATAACTGCTGTGGTGCTT
TAGAGGTAAAGAACGTTAATACAATGGCTGGATTATTATTACCAGCAAGGAACTTATCACTAGCAAGACAAATGGGTGCA
GATACTATAATGTCAGCATGTCCAGGTTGTCATTACTCTTTATCAAGAACCCACTATTACATGACAAAGTATCCAAAACT
AAGGGAGAAGGTTAATGCGTATTTAGAAAAGATGGGTGAAAAAGGTTATGATATGAAACTCTTAATGATTCATGCTGTAG
AGTTTATCTATAATACTGTAGGACCAGAGGGAGTTAAGGCTAGAGTAAAGAGACCATTAAATGGATTAAAAGTTGCGCCA
TATTATGGTTGTCTATATGCAAGACCAAAGCAATACATACTTACTGGATATATGAAGATAAAAGATGATCCAGAAAGACC
ATTCTTCATGGATAAACTACTAGAAGCTACGGGTGCAGAAGTAGTCCCATTTGAGGCAAAGACAATGTGCTGTGGTGGTC
CTCACGTTTACTCTGATATAAATGTTGCATTAAACTTAGAAGCTAGAATCCTTAAGGAGGCTAGGAGGAATGGTGCTGAA
TTATTAATAGTTGATTGTCCATTAGGTGGAGTAGCTTTTGAGACTAACATGAATAAAATTGCTGAAATTTACGGTGAAGA
TTTAAGAATGCCAGTAGTTTACTTTAGCCAATTATTAGCTTTTGCATTTGGCCATTCTCCAGAAGAAGCATTATTAAATG
CTAACTTAACAAACCCAATGACAGTATTAAAGAGATATTTATAA

Upstream 100 bases:

>100_bases
CTGGTTTAGTAAAAGATTTACTTAAGCCAAATAGAGTAAAGAATTGGGATAGAATAAAGAAAGTATTAGAAGAGGCAATG
CAGGAGGAGGTGAAACCAGA

Downstream 100 bases:

>100_bases
ATTATTTTGTTTTTTCTCTTCATTCTCTTTATTTTTCATGAACTCTTTTAGCCATTCAATTACTATATCATCGTTATTCT
CCTTTAAGAATTGTATATAT

Product: succinate dehydrogenase subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MSIRINNPYGKVAFYPGCSLDGMGKPYDVSLALVAKDLGLEYEKIEDYNCCGALEVKNVNTMAGLLLPARNLSLARQMGA
DTIMSACPGCHYSLSRTHYYMTKYPKLREKVNAYLEKMGEKGYDMKLLMIHAVEFIYNTVGPEGVKARVKRPLNGLKVAP
YYGCLYARPKQYILTGYMKIKDDPERPFFMDKLLEATGAEVVPFEAKTMCCGGPHVYSDINVALNLEARILKEARRNGAE
LLIVDCPLGGVAFETNMNKIAEIYGEDLRMPVVYFSQLLAFAFGHSPEEALLNANLTNPMTVLKRYL

Sequences:

>Translated_307_residues
MSIRINNPYGKVAFYPGCSLDGMGKPYDVSLALVAKDLGLEYEKIEDYNCCGALEVKNVNTMAGLLLPARNLSLARQMGA
DTIMSACPGCHYSLSRTHYYMTKYPKLREKVNAYLEKMGEKGYDMKLLMIHAVEFIYNTVGPEGVKARVKRPLNGLKVAP
YYGCLYARPKQYILTGYMKIKDDPERPFFMDKLLEATGAEVVPFEAKTMCCGGPHVYSDINVALNLEARILKEARRNGAE
LLIVDCPLGGVAFETNMNKIAEIYGEDLRMPVVYFSQLLAFAFGHSPEEALLNANLTNPMTVLKRYL
>Mature_306_residues
SIRINNPYGKVAFYPGCSLDGMGKPYDVSLALVAKDLGLEYEKIEDYNCCGALEVKNVNTMAGLLLPARNLSLARQMGAD
TIMSACPGCHYSLSRTHYYMTKYPKLREKVNAYLEKMGEKGYDMKLLMIHAVEFIYNTVGPEGVKARVKRPLNGLKVAPY
YGCLYARPKQYILTGYMKIKDDPERPFFMDKLLEATGAEVVPFEAKTMCCGGPHVYSDINVALNLEARILKEARRNGAEL
LIVDCPLGGVAFETNMNKIAEIYGEDLRMPVVYFSQLLAFAFGHSPEEALLNANLTNPMTVLKRYL

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrB may have a function in energy transduction [H]

COG id: COG2048

COG function: function code C; Heterodisulfide reductase, subunit B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hdrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017678
- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 34322; Mature: 34190

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRINNPYGKVAFYPGCSLDGMGKPYDVSLALVAKDLGLEYEKIEDYNCCGALEVKNVN
CEEEECCCCCCEEECCCCCCCCCCCCCEEEHEEEEHHHCCCHHHCCCCCCCCEEEECCCH
TMAGLLLPARNLSLARQMGADTIMSACPGCHYSLSRTHYYMTKYPKLREKVNAYLEKMGE
HHHHHHHCCCCHHHHHHHCHHHHHHHCCCCCEECCCCEEEECCCHHHHHHHHHHHHHHCC
KGYDMKLLMIHAVEFIYNTVGPEGVKARVKRPLNGLKVAPYYGCLYARPKQYILTGYMKI
CCCCEEHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEECCHHCEEECCCCCEEEEEEEEE
KDDPERPFFMDKLLEATGAEVVPFEAKTMCCGGPHVYSDINVALNLEARILKEARRNGAE
CCCCCCCHHHHHHHHHCCCEEEEECCCEEECCCCEEECCCEEEEEHHHHHHHHHHCCCCE
LLIVDCPLGGVAFETNMNKIAEIYGEDLRMPVVYFSQLLAFAFGHSPEEALLNANLTNPM
EEEEECCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHH
TVLKRYL
HHHHHCC
>Mature Secondary Structure 
SIRINNPYGKVAFYPGCSLDGMGKPYDVSLALVAKDLGLEYEKIEDYNCCGALEVKNVN
EEEECCCCCCEEECCCCCCCCCCCCCEEEHEEEEHHHCCCHHHCCCCCCCCEEEECCCH
TMAGLLLPARNLSLARQMGADTIMSACPGCHYSLSRTHYYMTKYPKLREKVNAYLEKMGE
HHHHHHHCCCCHHHHHHHCHHHHHHHCCCCCEECCCCEEEECCCHHHHHHHHHHHHHHCC
KGYDMKLLMIHAVEFIYNTVGPEGVKARVKRPLNGLKVAPYYGCLYARPKQYILTGYMKI
CCCCEEHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEECCHHCEEECCCCCEEEEEEEEE
KDDPERPFFMDKLLEATGAEVVPFEAKTMCCGGPHVYSDINVALNLEARILKEARRNGAE
CCCCCCCHHHHHHHHHCCCEEEEECCCEEECCCCEEECCCEEEEEHHHHHHHHHHCCCCE
LLIVDCPLGGVAFETNMNKIAEIYGEDLRMPVVYFSQLLAFAFGHSPEEALLNANLTNPM
EEEEECCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHH
TVLKRYL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]