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The map label for this gene is hycF [C]

Identifier: 15922149

GI number: 15922149

Start: 1845905

End: 1847278

Strand: Reverse

Name: hycF [C]

Synonym: ST1837

Alternate gene names: 15922149

Gene position: 1847278-1845905 (Counterclockwise)

Preceding gene: 15922150

Following gene: 15922148

Centisome position: 68.55

GC content: 34.13

Gene sequence:

>1374_bases
GTGGCTGAGTTTGGTGATTATCTGGCTAATGATGTTAGAGATAATGAATTGCAAGGTCTTTTAATAGTTTCCGAGTCTGA
TATGAGTAAGTTTGTTGCTGAAGCAGATGAAAGGCTTGGTTTAAATCCTTTAGCAATAGAGGTTTTACCCCTTTCCTGGT
TCTCCGAAAAGGGCGAGAATTATAGATTTGCTTTACTCATGGCTTATATAAGAAAGTTATCAAGACAAGAACTTGTATAT
AGATTACAGCCCATAAAAAACGTTACCATATCAAGACGTTCACTAATTAAGTTTAAGCTTTATGAATATAGACCTTATCC
TGTTCTTTTTGATTCTATCTTTGCTGAAAGGGAAATTAATACACTTATTTCGTCATGTCCTAAAGGGATATTAGCAAAGA
CTATTGAGGGGGTTGGAGTAACTTCCCCAGAGAACTGTTCATATTGCGGTTATTGTACCACTAAGGGTTACCTAGGTTAT
TTAGAAATGCCAACGTTTACAACTGATCAGCTAGTCTATTTTATTAACACTATAAATTATTATGATGATAAGGCTAAAGC
TTTGGTATTTACTAAATTTAAGGATATTCCTTTGCAGGAGGGTTATTATCCATTATTAGTACCTTCATTAGCTTCGATCC
CTGACGTATTTCTTTATGTTACTTATGCATCTGGTTTAGTCCCAGTGTTACTAATTGATCGTGAAACTAATGATATCGAA
AAGAAGAGATTAGATGAAATTCCTACATATTTCCCTGGATCGAAACTACCCATTTATAAAGTTAAGATTGAGGAGTTACA
AAAACTTGAGTTAAAAAATGAGCTAAGTAAATCCTTAATACCAGAAGAATTACCATTAAGGAAGTATAGGAGAAGAAATC
TATATTTATGGGCTATTGATGAAATGAAAAATAAAGTGAAGCTTGATGAAGAAGCAGAAGTTCCAGATATCTATTTCGTC
TCTATAGATCCAGAAAAGTGTGTTTTATGTGGTGTTTGTGTTAGGGCTTGTCAAATGATGGTCCCCGACTTGAAAAATGT
TAACGATACAATGTCGCTTGAGTATAATATTCCAATGTGTATAGGTTCTCAACGGTGTGTTAAAAACTGTCCAGAGAATG
CTATAAAGGTTGAGAGGTTTGCTAAAATAAAGGAGTTGAAGAAGATTGCTGTAAGTAAGGCTGTTGTTGCTAAGTGTAGA
TATTGTGGTAAGCCAATAGGTTCTGTAAAGGTTAAAAATAAGGTAGATTCCCTTCTGATAGATATGGGATTTTCTGGCAC
AGCACAGTATACAGATGTATGTAATGAGTGTAAACAAAAAATGTTAACAAAGGTCTGGCTTGAGAATTATCTGAAGATAA
AAGGAGGTAAATAA

Upstream 100 bases:

>100_bases
GTAAAAATTGAATATTGGTTTAGTTGTTAGCCAAAGGGCTAGAGAATTACTAACAGATGATTTTCTGTTGAAAATATATA
AAGAAAGTGGGATTCCTTAT

Downstream 100 bases:

>100_bases
ATATGTACGTATTTGCATTTAATTTTCTAAACACAATAGCTAAAGTCCCAGATAATACAATTAAAGAGTTAAATGAGTTA
CAATGTGTAATTACTACTTA

Product: ferredoxin

Products: CO2; H2; oxidized ferredoxin + [C]

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MAEFGDYLANDVRDNELQGLLIVSESDMSKFVAEADERLGLNPLAIEVLPLSWFSEKGENYRFALLMAYIRKLSRQELVY
RLQPIKNVTISRRSLIKFKLYEYRPYPVLFDSIFAEREINTLISSCPKGILAKTIEGVGVTSPENCSYCGYCTTKGYLGY
LEMPTFTTDQLVYFINTINYYDDKAKALVFTKFKDIPLQEGYYPLLVPSLASIPDVFLYVTYASGLVPVLLIDRETNDIE
KKRLDEIPTYFPGSKLPIYKVKIEELQKLELKNELSKSLIPEELPLRKYRRRNLYLWAIDEMKNKVKLDEEAEVPDIYFV
SIDPEKCVLCGVCVRACQMMVPDLKNVNDTMSLEYNIPMCIGSQRCVKNCPENAIKVERFAKIKELKKIAVSKAVVAKCR
YCGKPIGSVKVKNKVDSLLIDMGFSGTAQYTDVCNECKQKMLTKVWLENYLKIKGGK

Sequences:

>Translated_457_residues
MAEFGDYLANDVRDNELQGLLIVSESDMSKFVAEADERLGLNPLAIEVLPLSWFSEKGENYRFALLMAYIRKLSRQELVY
RLQPIKNVTISRRSLIKFKLYEYRPYPVLFDSIFAEREINTLISSCPKGILAKTIEGVGVTSPENCSYCGYCTTKGYLGY
LEMPTFTTDQLVYFINTINYYDDKAKALVFTKFKDIPLQEGYYPLLVPSLASIPDVFLYVTYASGLVPVLLIDRETNDIE
KKRLDEIPTYFPGSKLPIYKVKIEELQKLELKNELSKSLIPEELPLRKYRRRNLYLWAIDEMKNKVKLDEEAEVPDIYFV
SIDPEKCVLCGVCVRACQMMVPDLKNVNDTMSLEYNIPMCIGSQRCVKNCPENAIKVERFAKIKELKKIAVSKAVVAKCR
YCGKPIGSVKVKNKVDSLLIDMGFSGTAQYTDVCNECKQKMLTKVWLENYLKIKGGK
>Mature_456_residues
AEFGDYLANDVRDNELQGLLIVSESDMSKFVAEADERLGLNPLAIEVLPLSWFSEKGENYRFALLMAYIRKLSRQELVYR
LQPIKNVTISRRSLIKFKLYEYRPYPVLFDSIFAEREINTLISSCPKGILAKTIEGVGVTSPENCSYCGYCTTKGYLGYL
EMPTFTTDQLVYFINTINYYDDKAKALVFTKFKDIPLQEGYYPLLVPSLASIPDVFLYVTYASGLVPVLLIDRETNDIEK
KRLDEIPTYFPGSKLPIYKVKIEELQKLELKNELSKSLIPEELPLRKYRRRNLYLWAIDEMKNKVKLDEEAEVPDIYFVS
IDPEKCVLCGVCVRACQMMVPDLKNVNDTMSLEYNIPMCIGSQRCVKNCPENAIKVERFAKIKELKKIAVSKAVVAKCRY
CGKPIGSVKVKNKVDSLLIDMGFSGTAQYTDVCNECKQKMLTKVWLENYLKIKGGK

Specific function: Probable Electron Transfer Protein For Hydrogenase 3 [C]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52344; Mature: 52213

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEFGDYLANDVRDNELQGLLIVSESDMSKFVAEADERLGLNPLAIEVLPLSWFSEKGEN
CCCHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECHHHHCCCCC
YRFALLMAYIRKLSRQELVYRLQPIKNVTISRRSLIKFKLYEYRPYPVLFDSIFAEREIN
EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEEEEECCCCHHHHHHHHHHHHH
TLISSCPKGILAKTIEGVGVTSPENCSYCGYCTTKGYLGYLEMPTFTTDQLVYFINTINY
HHHHHCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCHHHHEEEEHHHHH
YDDKAKALVFTKFKDIPLQEGYYPLLVPSLASIPDVFLYVTYASGLVPVLLIDRETNDIE
CCCCCCEEEEEECCCCCCCCCCCCEECCCHHCCCHHHHHHHHHCCCEEEEEEECCCCHHH
KKRLDEIPTYFPGSKLPIYKVKIEELQKLELKNELSKSLIPEELPLRKYRRRNLYLWAID
HHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEEHH
EMKNKVKLDEEAEVPDIYFVSIDPEKCVLCGVCVRACQMMVPDLKNVNDTMSLEYNIPMC
HHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEE
IGSQRCVKNCPENAIKVERFAKIKELKKIAVSKAVVAKCRYCGKPIGSVKVKNKVDSLLI
ECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHEE
DMGFSGTAQYTDVCNECKQKMLTKVWLENYLKIKGGK
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCC
>Mature Secondary Structure 
AEFGDYLANDVRDNELQGLLIVSESDMSKFVAEADERLGLNPLAIEVLPLSWFSEKGEN
CCHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECHHHHCCCCC
YRFALLMAYIRKLSRQELVYRLQPIKNVTISRRSLIKFKLYEYRPYPVLFDSIFAEREIN
EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEEEEECCCCHHHHHHHHHHHHH
TLISSCPKGILAKTIEGVGVTSPENCSYCGYCTTKGYLGYLEMPTFTTDQLVYFINTINY
HHHHHCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCHHHHEEEEHHHHH
YDDKAKALVFTKFKDIPLQEGYYPLLVPSLASIPDVFLYVTYASGLVPVLLIDRETNDIE
CCCCCCEEEEEECCCCCCCCCCCCEECCCHHCCCHHHHHHHHHCCCEEEEEEECCCCHHH
KKRLDEIPTYFPGSKLPIYKVKIEELQKLELKNELSKSLIPEELPLRKYRRRNLYLWAID
HHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEEHH
EMKNKVKLDEEAEVPDIYFVSIDPEKCVLCGVCVRACQMMVPDLKNVNDTMSLEYNIPMC
HHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEE
IGSQRCVKNCPENAIKVERFAKIKELKKIAVSKAVVAKCRYCGKPIGSVKVKNKVDSLLI
ECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHEE
DMGFSGTAQYTDVCNECKQKMLTKVWLENYLKIKGGK
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; Proton; reduced ferredoxin [C]

Specific reaction: formate = CO2 + H2 Proton + reduced ferredoxin = H2 + oxidized ferredoxin [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA