| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15921980
Identifier: 15921980
GI number: 15921980
Start: 1673587
End: 1675239
Strand: Reverse
Name: 15921980
Synonym: ST1677
Alternate gene names: NA
Gene position: 1675239-1673587 (Counterclockwise)
Preceding gene: 15921981
Following gene: 15921977
Centisome position: 62.17
GC content: 32.91
Gene sequence:
>1653_bases GTGATGAAAAAGGTAATATATGCTCTACTAATAGTGTTAATTTTACCAATTTTTTCAATTATACCTTTAGCCTCAAATAA TCCGACAATTCATGTTTACTATACACGATATGATAGTATATATAGCAGTGGTGGTGTAAAAAACTTCTTGTTAAATTCTA ACAGTGTACTATATACTGTCACATCAGTTATGTATAATAATACGATATCTGGAAATAATCAAGCTTTACATGCCACTTAT AATAAATCTGTATATCTACTAACTTTCAACTCTATAAGCAACTATACTGGTAAAGTTAAAGTTAGCATATATACAAACAA TTCTCTTTCACTTTACACAAACGTTCCTAACTTGATTAGAGTAATAGTATATAGTGCTGGACAATCAGAACTAGTGTGGG CTGGGGTTGAAAATAGTTCTATTACAATTAATACATTAGCATATGTTAACGGAACTGGAACATTACTCCTACAATTCGCA AACGGTACTTCTATTGTTAACGTAACTTTAGGTATTAAGACTAATACTACATTAACTAAGGACATTAGCTTAAGCTTACT TTCAATGGGCTTCACAATCTCTTCAACTACCAGTGGAGAACTTTCGATTCAAACACAAATTCCCAAGAGGTATTCTCCAC TCTTCATGAGTGTAAATTATAACGGTACATCATGGAGTAATGAGTCTGGATATATAGTTACTGAGGCATATTTTAATGGT TCATTGACACCAGCACTAGTTTGGAAAGGGATGGGATACGGTTTTGCTGGGGGATTAATGGGTGGTGGTAAGTTACAATT TAGTGAAGAAACCATAGAATTTTATGGCGTTAATGGTACCGTAGTTGGGTATGTTCATATGGTTAATGTTAACGGAACTA ATTCATTTGGTCTAGGACCCATAAAACACAGTGCAAACTTCGAGTTTTCTGAAATTAAAATAGTTGAAGTTGAAGGAGCC ACTGTAGTTCATGGTGAATTTGTAGGGAAAACATATGTAAACGGAAATGAAATTATAATTGTTGCTAATAGTCACGGTAA GGTTTCTTCTACAGCTTACGTAAACTTTACCCATGTGGTTTCTGTAAATAATGAAGCTGGAGTTTTAGTACTTATTTACT TAAATAACTCAGCTAAATTTGTTGTAGTTACCAAGTCTAATGTTACTGCAAATGTGACAACTGTTAAACCAGAAAATGTT AGTAATACTACAGTAAAAATTCAGGATAAAGCTTATGTAGCACAAGAAGTTATAGTTAATTCATCATCACAGTATATATT ATTTAACGTTAGTCTTCTCACTAACAATAGTGAAGTTACAGTTTACAAATTAGTGAATGGAGAACTTATAGAATTAAATT CCTCAAATTACTTTATTGCTAACGGAAAGCTTATAGTATTTGATGATCCCTCAAATGTATACTATGTAGTATATAACCAA CAACCAAGTACAGTTGCTACAACATCAACTACACAGCAGTCAACTTCAACATCAACAACTAGTCAAACACCTTCAACGGC AACAACATCTCAACTAATACCCCCACCCTCTACAACAACCTCGTCATCGACAACTACAGTTTTGATTATAGGTATAATAA TAGCAGTGATATTGATTGCAATAGGCTTAGTTCTAGTCCTTAGAAGAAGATAA
Upstream 100 bases:
>100_bases TTAGTAAAAAGAGTGGAACAAAGTAAATAAATTGAATTTTACTAAAATCCATTTTGCTTGTTCGTATTAAACTTATATAG TCGAAACGTTTTTCTTTATC
Downstream 100 bases:
>100_bases ATTATTTTTTGCCTTCCCTTTTTCCATTATTCTTTTTCCACTCTCCATTACAGCAACAAGATAGCCAGCTATAATCATGT TATAAAGTATTGTAAATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 550; Mature: 550
Protein sequence:
>550_residues MMKKVIYALLIVLILPIFSIIPLASNNPTIHVYYTRYDSIYSSGGVKNFLLNSNSVLYTVTSVMYNNTISGNNQALHATY NKSVYLLTFNSISNYTGKVKVSIYTNNSLSLYTNVPNLIRVIVYSAGQSELVWAGVENSSITINTLAYVNGTGTLLLQFA NGTSIVNVTLGIKTNTTLTKDISLSLLSMGFTISSTTSGELSIQTQIPKRYSPLFMSVNYNGTSWSNESGYIVTEAYFNG SLTPALVWKGMGYGFAGGLMGGGKLQFSEETIEFYGVNGTVVGYVHMVNVNGTNSFGLGPIKHSANFEFSEIKIVEVEGA TVVHGEFVGKTYVNGNEIIIVANSHGKVSSTAYVNFTHVVSVNNEAGVLVLIYLNNSAKFVVVTKSNVTANVTTVKPENV SNTTVKIQDKAYVAQEVIVNSSSQYILFNVSLLTNNSEVTVYKLVNGELIELNSSNYFIANGKLIVFDDPSNVYYVVYNQ QPSTVATTSTTQQSTSTSTTSQTPSTATTSQLIPPPSTTTSSSTTTVLIIGIIIAVILIAIGLVLVLRRR
Sequences:
>Translated_550_residues MMKKVIYALLIVLILPIFSIIPLASNNPTIHVYYTRYDSIYSSGGVKNFLLNSNSVLYTVTSVMYNNTISGNNQALHATY NKSVYLLTFNSISNYTGKVKVSIYTNNSLSLYTNVPNLIRVIVYSAGQSELVWAGVENSSITINTLAYVNGTGTLLLQFA NGTSIVNVTLGIKTNTTLTKDISLSLLSMGFTISSTTSGELSIQTQIPKRYSPLFMSVNYNGTSWSNESGYIVTEAYFNG SLTPALVWKGMGYGFAGGLMGGGKLQFSEETIEFYGVNGTVVGYVHMVNVNGTNSFGLGPIKHSANFEFSEIKIVEVEGA TVVHGEFVGKTYVNGNEIIIVANSHGKVSSTAYVNFTHVVSVNNEAGVLVLIYLNNSAKFVVVTKSNVTANVTTVKPENV SNTTVKIQDKAYVAQEVIVNSSSQYILFNVSLLTNNSEVTVYKLVNGELIELNSSNYFIANGKLIVFDDPSNVYYVVYNQ QPSTVATTSTTQQSTSTSTTSQTPSTATTSQLIPPPSTTTSSSTTTVLIIGIIIAVILIAIGLVLVLRRR >Mature_550_residues MMKKVIYALLIVLILPIFSIIPLASNNPTIHVYYTRYDSIYSSGGVKNFLLNSNSVLYTVTSVMYNNTISGNNQALHATY NKSVYLLTFNSISNYTGKVKVSIYTNNSLSLYTNVPNLIRVIVYSAGQSELVWAGVENSSITINTLAYVNGTGTLLLQFA NGTSIVNVTLGIKTNTTLTKDISLSLLSMGFTISSTTSGELSIQTQIPKRYSPLFMSVNYNGTSWSNESGYIVTEAYFNG SLTPALVWKGMGYGFAGGLMGGGKLQFSEETIEFYGVNGTVVGYVHMVNVNGTNSFGLGPIKHSANFEFSEIKIVEVEGA TVVHGEFVGKTYVNGNEIIIVANSHGKVSSTAYVNFTHVVSVNNEAGVLVLIYLNNSAKFVVVTKSNVTANVTTVKPENV SNTTVKIQDKAYVAQEVIVNSSSQYILFNVSLLTNNSEVTVYKLVNGELIELNSSNYFIANGKLIVFDDPSNVYYVVYNQ QPSTVATTSTTQQSTSTSTTSQTPSTATTSQLIPPPSTTTSSSTTTVLIIGIIIAVILIAIGLVLVLRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59379; Mature: 59379
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKVIYALLIVLILPIFSIIPLASNNPTIHVYYTRYDSIYSSGGVKNFLLNSNSVLYTV CHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEEECCCCCCCCCEEEEECCCCEEEEE TSVMYNNTISGNNQALHATYNKSVYLLTFNSISNYTGKVKVSIYTNNSLSLYTNVPNLIR EEEEECCEECCCCEEEEEEECCEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCHHEE VIVYSAGQSELVWAGVENSSITINTLAYVNGTGTLLLQFANGTSIVNVTLGIKTNTTLTK EEEECCCCCEEEEEECCCCEEEEEEEEEECCCCEEEEEEECCCEEEEEEEEEECCCEEEE DISLSLLSMGFTISSTTSGELSIQTQIPKRYSPLFMSVNYNGTSWSNESGYIVTEAYFNG CCEEEEEEECEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECC SLTPALVWKGMGYGFAGGLMGGGKLQFSEETIEFYGVNGTVVGYVHMVNVNGTNSFGLGP CCCHHHEEECCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEEEEEEEEECCCCCCCCCC IKHSANFEFSEIKIVEVEGATVVHGEFVGKTYVNGNEIIIVANSHGKVSSTAYVNFTHVV CCCCCCCEEEEEEEEEECCCEEEEEEECCEEEECCCEEEEEECCCCCEEEEEEEEEEEEE SVNNEAGVLVLIYLNNSAKFVVVTKSNVTANVTTVKPENVSNTTVKIQDKAYVAQEVIVN EECCCCCEEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECHHHEEEEHEEC SSSQYILFNVSLLTNNSEVTVYKLVNGELIELNSSNYFIANGKLIVFDDPSNVYYVVYNQ CCCCEEEEEEEEEECCCCEEEEEEECCEEEEECCCCEEEECCEEEEEECCCCEEEEEECC QPSTVATTSTTQQSTSTSTTSQTPSTATTSQLIPPPSTTTSSSTTTVLIIGIIIAVILIA CCCEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEHHHHHHHHHHH IGLVLVLRRR HHHHHHCCCC >Mature Secondary Structure MMKKVIYALLIVLILPIFSIIPLASNNPTIHVYYTRYDSIYSSGGVKNFLLNSNSVLYTV CHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEEECCCCCCCCCEEEEECCCCEEEEE TSVMYNNTISGNNQALHATYNKSVYLLTFNSISNYTGKVKVSIYTNNSLSLYTNVPNLIR EEEEECCEECCCCEEEEEEECCEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCHHEE VIVYSAGQSELVWAGVENSSITINTLAYVNGTGTLLLQFANGTSIVNVTLGIKTNTTLTK EEEECCCCCEEEEEECCCCEEEEEEEEEECCCCEEEEEEECCCEEEEEEEEEECCCEEEE DISLSLLSMGFTISSTTSGELSIQTQIPKRYSPLFMSVNYNGTSWSNESGYIVTEAYFNG CCEEEEEEECEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECC SLTPALVWKGMGYGFAGGLMGGGKLQFSEETIEFYGVNGTVVGYVHMVNVNGTNSFGLGP CCCHHHEEECCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEEEEEEEEECCCCCCCCCC IKHSANFEFSEIKIVEVEGATVVHGEFVGKTYVNGNEIIIVANSHGKVSSTAYVNFTHVV CCCCCCCEEEEEEEEEECCCEEEEEEECCEEEECCCEEEEEECCCCCEEEEEEEEEEEEE SVNNEAGVLVLIYLNNSAKFVVVTKSNVTANVTTVKPENVSNTTVKIQDKAYVAQEVIVN EECCCCCEEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEECHHHEEEEHEEC SSSQYILFNVSLLTNNSEVTVYKLVNGELIELNSSNYFIANGKLIVFDDPSNVYYVVYNQ CCCCEEEEEEEEEECCCCEEEEEEECCEEEEECCCCEEEECCEEEEEECCCCEEEEEECC QPSTVATTSTTQQSTSTSTTSQTPSTATTSQLIPPPSTTTSSSTTTVLIIGIIIAVILIA CCCEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEHHHHHHHHHHH IGLVLVLRRR HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA