Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

Click here to switch to the map view.

The map label for this gene is 15921901

Identifier: 15921901

GI number: 15921901

Start: 1598555

End: 1599160

Strand: Direct

Name: 15921901

Synonym: ST1601

Alternate gene names: NA

Gene position: 1598555-1599160 (Clockwise)

Preceding gene: 15921900

Following gene: 15921902

Centisome position: 59.32

GC content: 30.03

Gene sequence:

>606_bases
GTGAATTCGTGGAAGACTATTTCGGTTATATTAATTGCAGTAGCTTTAATATTAGGAGGAGTAACTGCCTATAATATATA
TGATGTGTACTTTGTTAACCATAATTCTAATAATCCGCTATATGTATTTACGTCAGTTTCTACTCCTACATATAAACAAG
ATCCCGTTATAGGAAATTATAGTTTTATAATAGGTTCCGGTACTACATTTACGAATTTAGGAAATAAAACGCTTGTAGCC
TCGTATGTTTACATTAACCTAACTAAAATAAAAATAGGGGACAGTTTTCTAGTCTTTGCACCGGTAAATAATGGTTCGGA
GATTACTAGGATATTTTACCTTAAGCCTATAGTAAATATTACTATTTTAAATGATTCAGTATATATTTCTAAAGGTTATA
AGTACTTAAACTTATTAATAAAAGTCATATATCCTGCGTTTGTAAACGATGTAGAATACGATAGTGCAACAATTATCTTA
AATTATTCTATAGAGGTGACTTCAATGATTCATATAATTGATTATACGTGGCTATACGTTGAATTTTTAGCATTAAACTC
GACAGTATTAAAGATGGAGTTTTATGTGGGGCCGACGACTTTTTAG

Upstream 100 bases:

>100_bases
TCCAAATACGGTATCTTAAAAGTCATTTTTTATTTGTTTAGGTTTAAATTTCTTTTATGGATCCCAATCCATAGGCATTA
ATAATTTATGGTGAGAAAAC

Downstream 100 bases:

>100_bases
CATTAATATTCTCTATGTAACATCGATAGTTAAGTATTTTATTTTTAGATAATAAGTGTGGTAAATATGTGATAGTTAAT
TTTTCTTAAACCATAAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MNSWKTISVILIAVALILGGVTAYNIYDVYFVNHNSNNPLYVFTSVSTPTYKQDPVIGNYSFIIGSGTTFTNLGNKTLVA
SYVYINLTKIKIGDSFLVFAPVNNGSEITRIFYLKPIVNITILNDSVYISKGYKYLNLLIKVIYPAFVNDVEYDSATIIL
NYSIEVTSMIHIIDYTWLYVEFLALNSTVLKMEFYVGPTTF

Sequences:

>Translated_201_residues
MNSWKTISVILIAVALILGGVTAYNIYDVYFVNHNSNNPLYVFTSVSTPTYKQDPVIGNYSFIIGSGTTFTNLGNKTLVA
SYVYINLTKIKIGDSFLVFAPVNNGSEITRIFYLKPIVNITILNDSVYISKGYKYLNLLIKVIYPAFVNDVEYDSATIIL
NYSIEVTSMIHIIDYTWLYVEFLALNSTVLKMEFYVGPTTF
>Mature_201_residues
MNSWKTISVILIAVALILGGVTAYNIYDVYFVNHNSNNPLYVFTSVSTPTYKQDPVIGNYSFIIGSGTTFTNLGNKTLVA
SYVYINLTKIKIGDSFLVFAPVNNGSEITRIFYLKPIVNITILNDSVYISKGYKYLNLLIKVIYPAFVNDVEYDSATIIL
NYSIEVTSMIHIIDYTWLYVEFLALNSTVLKMEFYVGPTTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22666; Mature: 22666

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSWKTISVILIAVALILGGVTAYNIYDVYFVNHNSNNPLYVFTSVSTPTYKQDPVIGNY
CCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCEECCE
SFIIGSGTTFTNLGNKTLVASYVYINLTKIKIGDSFLVFAPVNNGSEITRIFYLKPIVNI
EEEEECCCEEEECCCCEEEEEEEEEEEEEEEECCEEEEEEECCCCCCEEEEEEEECEEEE
TILNDSVYISKGYKYLNLLIKVIYPAFVNDVEYDSATIILNYSIEVTSMIHIIDYTWLYV
EEECCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEHEEEEEHHHHHHEE
EFLALNSTVLKMEFYVGPTTF
EEECCCCEEEEEEEEECCCCC
>Mature Secondary Structure
MNSWKTISVILIAVALILGGVTAYNIYDVYFVNHNSNNPLYVFTSVSTPTYKQDPVIGNY
CCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCEECCE
SFIIGSGTTFTNLGNKTLVASYVYINLTKIKIGDSFLVFAPVNNGSEITRIFYLKPIVNI
EEEEECCCEEEECCCCEEEEEEEEEEEEEEEECCEEEEEEECCCCCCEEEEEEEECEEEE
TILNDSVYISKGYKYLNLLIKVIYPAFVNDVEYDSATIILNYSIEVTSMIHIIDYTWLYV
EEECCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEHEEEEEHHHHHHEE
EFLALNSTVLKMEFYVGPTTF
EEECCCCEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA