| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15921881
Identifier: 15921881
GI number: 15921881
Start: 1579167
End: 1579880
Strand: Direct
Name: 15921881
Synonym: ST1583
Alternate gene names: NA
Gene position: 1579167-1579880 (Clockwise)
Preceding gene: 15921880
Following gene: 15921883
Centisome position: 58.6
GC content: 30.95
Gene sequence:
>714_bases ATGTTACGTGAATTCATTCATTTAATAATTATGCAATTTAAGATGATTAAGGCATATTTACCAGCTGTAATTTTTTACTC AATATTTTTCCCATTAGCCTTTATGTTCTCTTTTGGCTTAATTACTTTCTCAAAATATCTAGTTTATTTCATCTCTGGTA CAATAACTTTTTATATATCAATTGGCGTGTTTGTTAGCACTACTCAAACTTTATCTAGTGAGAGAAGAGAGGGAAGATTT TCTCTCATCGTTGCTTCAGGTATATCGAGGGAATTGTATGCAATAAGCATTGCGATAGCTCAAGGTATTTCAACACTAAT TATGATTCCGGTAATAGTTATCTTAGGGGATTATATTTTGCATATTGTGTTAAAATCTGTAATTTACCTATTGTTAAGCG TTATAATCGGAATTTTCACCTTTTCTATGTTAGGAATAACTTTAGGTTTAGGGATTAAGAATTATTACGCGGTTGTTCAG TATTCTCAAATTTTAGGATTTGCATTAACCTTTTTTGCCCCAGTTTATTATCCAATTACTTTTATACCAGCCCCATTTAG ATACCTAACTTACTTAGAACCAACAACATACATGTCGGAAGCTATTTACAATTCATTCGTAGGGAATCCAGTATCTTTAT TGTGGAATTTAGGATGTCTAATTTACGGCATCGCATTAATGATAATAAACACTAGAATACTAAAATCAACGTAA
Upstream 100 bases:
>100_bases AAAGGAGAAGAAGAGTTGAAGAAAGTCATTATGAGTATTCAAGGAAAGTTCGAAGTTAAGCTACCTTCGTTAGAGGAGAT TTATTTGGAGGTAATAAAGG
Downstream 100 bases:
>100_bases ACACATTATATACTTTACAAAGAATCTACAAGGAGCATTATTTACTATAATTACATGTGTATATAATTCATAATTTTATC TTTTCTCTTTGGCTTAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MLREFIHLIIMQFKMIKAYLPAVIFYSIFFPLAFMFSFGLITFSKYLVYFISGTITFYISIGVFVSTTQTLSSERREGRF SLIVASGISRELYAISIAIAQGISTLIMIPVIVILGDYILHIVLKSVIYLLLSVIIGIFTFSMLGITLGLGIKNYYAVVQ YSQILGFALTFFAPVYYPITFIPAPFRYLTYLEPTTYMSEAIYNSFVGNPVSLLWNLGCLIYGIALMIINTRILKST
Sequences:
>Translated_237_residues MLREFIHLIIMQFKMIKAYLPAVIFYSIFFPLAFMFSFGLITFSKYLVYFISGTITFYISIGVFVSTTQTLSSERREGRF SLIVASGISRELYAISIAIAQGISTLIMIPVIVILGDYILHIVLKSVIYLLLSVIIGIFTFSMLGITLGLGIKNYYAVVQ YSQILGFALTFFAPVYYPITFIPAPFRYLTYLEPTTYMSEAIYNSFVGNPVSLLWNLGCLIYGIALMIINTRILKST >Mature_237_residues MLREFIHLIIMQFKMIKAYLPAVIFYSIFFPLAFMFSFGLITFSKYLVYFISGTITFYISIGVFVSTTQTLSSERREGRF SLIVASGISRELYAISIAIAQGISTLIMIPVIVILGDYILHIVLKSVIYLLLSVIIGIFTFSMLGITLGLGIKNYYAVVQ YSQILGFALTFFAPVYYPITFIPAPFRYLTYLEPTTYMSEAIYNSFVGNPVSLLWNLGCLIYGIALMIINTRILKST
Specific function: Unknown
COG id: COG0842
COG function: function code V; ABC-type multidrug transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26792; Mature: 26792
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS51012 ABC_TM2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLREFIHLIIMQFKMIKAYLPAVIFYSIFFPLAFMFSFGLITFSKYLVYFISGTITFYIS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE IGVFVSTTQTLSSERREGRFSLIVASGISRELYAISIAIAQGISTLIMIPVIVILGDYIL HHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HIVLKSVIYLLLSVIIGIFTFSMLGITLGLGIKNYYAVVQYSQILGFALTFFAPVYYPIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIPAPFRYLTYLEPTTYMSEAIYNSFVGNPVSLLWNLGCLIYGIALMIINTRILKST HCCCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLREFIHLIIMQFKMIKAYLPAVIFYSIFFPLAFMFSFGLITFSKYLVYFISGTITFYIS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE IGVFVSTTQTLSSERREGRFSLIVASGISRELYAISIAIAQGISTLIMIPVIVILGDYIL HHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HIVLKSVIYLLLSVIIGIFTFSMLGITLGLGIKNYYAVVQYSQILGFALTFFAPVYYPIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIPAPFRYLTYLEPTTYMSEAIYNSFVGNPVSLLWNLGCLIYGIALMIINTRILKST HCCCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA