| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15921878
Identifier: 15921878
GI number: 15921878
Start: 1577048
End: 1578232
Strand: Reverse
Name: 15921878
Synonym: ST1580
Alternate gene names: NA
Gene position: 1578232-1577048 (Counterclockwise)
Preceding gene: 15921882
Following gene: 15921874
Centisome position: 58.57
GC content: 35.19
Gene sequence:
>1185_bases ATGATAAGTTTAATTGGAAAGATTTTTGATGGAGAGAAAATAATTGAAAAGGGAACTGTTGTTATAGATGGAGATAAAAT AGTCAAAATAGTAGAAGAAGAGAGTAAAGAAGGAGAAGTTATATACGGAAATTTCATAATGCCTGGTTTAATTGATACCC ATATACATTTCTTCGGTGTAGATGAGGATAATCTTCTGTCATGGAATCTCGTTAACGAAATTGACGTCGCTATAAGAAGT ACGAGAGATATGGAAAGGATTTTAAGATCGGGGTTTACAACCGTTAGGGATTTAGGGAGTAAAGTAGCGGTTAATTTAGC CAGATTACAAAGAAAAGGTGAGATCATAGGACCTACTGTCATTGCTTCTGGATACTCGTTATCAATAACTGGAGGTAATG ATGACCCCAAATCATTACCTATTGACATAGCTCAAAGGCTTTCATATTCCTTCTATTGTGATTCCCCATATGAGTGCAGA AAGGCCGTAAGAATGGCGATAAGGCAGGGTGCAACAGTAATAAAAGTTTATGCTTCTGGTGCATTTTCTCAAGGAGGAAA AATAATGCCGGGATTTTCACTAGATGAGTTAAAAGCAATTGTTGAAGAGGCTCATAGAAATGGACTTAAAGTTGCGTCTC ATGCCTATGGGAAGGAAGCTATTATGAACTCAGTCCTAGCTGGAGTTGATACGATAGAACATGGTTTAGGCTTAGATGAG GAATCTGCCACTTTAATTAAAGAAAAAGGAGTATGTTATATACCTACATTAGCGACTTACGAAATACCATTTGAAGTAGA TCCAATAGTTAGACCATTTAGAGAAGAACTAGTTAAAAGGCACTTCACTGAAGATATGAGAATTGCAATATCTAAAGGTT TGAAAATTGCATTGGGAACTGATTATGTAGGATCTAAACAAAGACCTCACGGAAAAAATTATAGAGAAGCTGTACTACTT TCAAGATATATGCCAAATGTAGAAGTATTAAAATCTGCAACTTCTATAGCTAGTGAATGCCTAGGATTACACAATGTTGG CAGAATAAGAGAAGGTTATAACGCTGATGTAATCGTATTAAACGCTGATCCCTTAAATGACATAGAAAACTTATCACCAC AACATATAATGTATGTGATAAAAGAAGGGCAAAAGTATAAAGGTTATGCTCTTTTTAATGATTAA
Upstream 100 bases:
>100_bases AAATAAAAAACTATTATATGACAGAAATATATAATCAAAACATCTTTTAGTCTCCTCTTGGTACCATAAGCTAAATATTT TCTTTTTACGTTAATATTTT
Downstream 100 bases:
>100_bases TTTCTGTAGCTTCAACTGTATATGTCACATTTTCTAACTGAGAAAAAATCTGTAGTAGAGATTGTATAGAAGAGAAAAAT CCAGATGTTTCTATTACATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MISLIGKIFDGEKIIEKGTVVIDGDKIVKIVEEESKEGEVIYGNFIMPGLIDTHIHFFGVDEDNLLSWNLVNEIDVAIRS TRDMERILRSGFTTVRDLGSKVAVNLARLQRKGEIIGPTVIASGYSLSITGGNDDPKSLPIDIAQRLSYSFYCDSPYECR KAVRMAIRQGATVIKVYASGAFSQGGKIMPGFSLDELKAIVEEAHRNGLKVASHAYGKEAIMNSVLAGVDTIEHGLGLDE ESATLIKEKGVCYIPTLATYEIPFEVDPIVRPFREELVKRHFTEDMRIAISKGLKIALGTDYVGSKQRPHGKNYREAVLL SRYMPNVEVLKSATSIASECLGLHNVGRIREGYNADVIVLNADPLNDIENLSPQHIMYVIKEGQKYKGYALFND
Sequences:
>Translated_394_residues MISLIGKIFDGEKIIEKGTVVIDGDKIVKIVEEESKEGEVIYGNFIMPGLIDTHIHFFGVDEDNLLSWNLVNEIDVAIRS TRDMERILRSGFTTVRDLGSKVAVNLARLQRKGEIIGPTVIASGYSLSITGGNDDPKSLPIDIAQRLSYSFYCDSPYECR KAVRMAIRQGATVIKVYASGAFSQGGKIMPGFSLDELKAIVEEAHRNGLKVASHAYGKEAIMNSVLAGVDTIEHGLGLDE ESATLIKEKGVCYIPTLATYEIPFEVDPIVRPFREELVKRHFTEDMRIAISKGLKIALGTDYVGSKQRPHGKNYREAVLL SRYMPNVEVLKSATSIASECLGLHNVGRIREGYNADVIVLNADPLNDIENLSPQHIMYVIKEGQKYKGYALFND >Mature_394_residues MISLIGKIFDGEKIIEKGTVVIDGDKIVKIVEEESKEGEVIYGNFIMPGLIDTHIHFFGVDEDNLLSWNLVNEIDVAIRS TRDMERILRSGFTTVRDLGSKVAVNLARLQRKGEIIGPTVIASGYSLSITGGNDDPKSLPIDIAQRLSYSFYCDSPYECR KAVRMAIRQGATVIKVYASGAFSQGGKIMPGFSLDELKAIVEEAHRNGLKVASHAYGKEAIMNSVLAGVDTIEHGLGLDE ESATLIKEKGVCYIPTLATYEIPFEVDPIVRPFREELVKRHFTEDMRIAISKGLKIALGTDYVGSKQRPHGKNYREAVLL SRYMPNVEVLKSATSIASECLGLHNVGRIREGYNADVIVLNADPLNDIENLSPQHIMYVIKEGQKYKGYALFND
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.coelicolor SCO1861 [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322248, Length=328, Percent_Identity=34.7560975609756, Blast_Score=144, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: NA
Molecular weight: Translated: 43600; Mature: 43600
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLIGKIFDGEKIIEKGTVVIDGDKIVKIVEEESKEGEVIYGNFIMPGLIDTHIHFFGV CCCCHHHHCCCHHHHHCCCEEECCCCEEEEECCCCCCCCEEEECEECCCHHHCCEEEEEC DEDNLLSWNLVNEIDVAIRSTRDMERILRSGFTTVRDLGSKVAVNLARLQRKGEIIGPTV CCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE IASGYSLSITGGNDDPKSLPIDIAQRLSYSFYCDSPYECRKAVRMAIRQGATVIKVYASG EECCEEEEEECCCCCCCCCCHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCEEEEEEECC AFSQGGKIMPGFSLDELKAIVEEAHRNGLKVASHAYGKEAIMNSVLAGVDTIEHGLGLDE CCCCCCEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ESATLIKEKGVCYIPTLATYEIPFEVDPIVRPFREELVKRHFTEDMRIAISKGLKIALGT CHHHHHHCCCCEEECCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEECC DYVGSKQRPHGKNYREAVLLSRYMPNVEVLKSATSIASECLGLHNVGRIREGYNADVIVL CCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE NADPLNDIENLSPQHIMYVIKEGQKYKGYALFND CCCCCCHHHHCCHHHEEEEEECCCCCCCEEEECC >Mature Secondary Structure MISLIGKIFDGEKIIEKGTVVIDGDKIVKIVEEESKEGEVIYGNFIMPGLIDTHIHFFGV CCCCHHHHCCCHHHHHCCCEEECCCCEEEEECCCCCCCCEEEECEECCCHHHCCEEEEEC DEDNLLSWNLVNEIDVAIRSTRDMERILRSGFTTVRDLGSKVAVNLARLQRKGEIIGPTV CCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE IASGYSLSITGGNDDPKSLPIDIAQRLSYSFYCDSPYECRKAVRMAIRQGATVIKVYASG EECCEEEEEECCCCCCCCCCHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCEEEEEEECC AFSQGGKIMPGFSLDELKAIVEEAHRNGLKVASHAYGKEAIMNSVLAGVDTIEHGLGLDE CCCCCCEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ESATLIKEKGVCYIPTLATYEIPFEVDPIVRPFREELVKRHFTEDMRIAISKGLKIALGT CHHHHHHCCCCEEECCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEECC DYVGSKQRPHGKNYREAVLLSRYMPNVEVLKSATSIASECLGLHNVGRIREGYNADVIVL CCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE NADPLNDIENLSPQHIMYVIKEGQKYKGYALFND CCCCCCHHHHCCHHHEEEEEECCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]