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The map label for this gene is 15921872

Identifier: 15921872

GI number: 15921872

Start: 1571134

End: 1571526

Strand: Reverse

Name: 15921872

Synonym: ST1574

Alternate gene names: NA

Gene position: 1571526-1571134 (Counterclockwise)

Preceding gene: 15921873

Following gene: 15921871

Centisome position: 58.32

GC content: 36.13

Gene sequence:

>393_bases
GTGAATTATAAAGAGTGGTTAGAACAAGCAGTTGAGGCTCTCGATACAGCCAACGTTCTTATTATTACAGAGAAATATTA
TGCCTCTGCTTTTTATTCTCAGCAAGCAGCAGAAAAAGCGTTAAAATCATTTGTTTTATATCTGGGTAAAGACCCAGGCA
AAACACATTCACTCACGGAACTAGCTGAAATACTAGAGAAGGAAGGTGTACAAATTCCAGTGAAGATTAAAGAGAATTTA
ATGGTTCTTTCTCCTCATTTTATTATATCAAGGTATCCAGATGCTGCGAACGGTGTTCCTTATAAACAGTATAACAAGTC
AATAGCGGAGGACTTGTATAATAGAGTTAAAGAGGTAATAGAATGGGTAAAATCAGAGGTAAGTCAGCAATAG

Upstream 100 bases:

>100_bases
TAAAAAGACTATACAATATATAATTTTAGATCAAAGGCGATAATTCAACTTAGGAAAATCATTGAGTAAATTAAAATACT
CGTTAAAGTAATCTAAATAC

Downstream 100 bases:

>100_bases
AGAGTCAAATTAAAATGTTAAACCTAGCAAAGGAAATAGTGGAGAAGGTATCGGAGGAACTTCCACAACTTATAGAGGTT
TATATCTTCGGCTCTAGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: HEPN Domain Protein

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MNYKEWLEQAVEALDTANVLIITEKYYASAFYSQQAAEKALKSFVLYLGKDPGKTHSLTELAEILEKEGVQIPVKIKENL
MVLSPHFIISRYPDAANGVPYKQYNKSIAEDLYNRVKEVIEWVKSEVSQQ

Sequences:

>Translated_130_residues
MNYKEWLEQAVEALDTANVLIITEKYYASAFYSQQAAEKALKSFVLYLGKDPGKTHSLTELAEILEKEGVQIPVKIKENL
MVLSPHFIISRYPDAANGVPYKQYNKSIAEDLYNRVKEVIEWVKSEVSQQ
>Mature_130_residues
MNYKEWLEQAVEALDTANVLIITEKYYASAFYSQQAAEKALKSFVLYLGKDPGKTHSLTELAEILEKEGVQIPVKIKENL
MVLSPHFIISRYPDAANGVPYKQYNKSIAEDLYNRVKEVIEWVKSEVSQQ

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14887; Mature: 14887

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYKEWLEQAVEALDTANVLIITEKYYASAFYSQQAAEKALKSFVLYLGKDPGKTHSLTE
CCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LAEILEKEGVQIPVKIKENLMVLSPHFIISRYPDAANGVPYKQYNKSIAEDLYNRVKEVI
HHHHHHHCCCEEEEEECCCEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
EWVKSEVSQQ
HHHHHHHCCC
>Mature Secondary Structure
MNYKEWLEQAVEALDTANVLIITEKYYASAFYSQQAAEKALKSFVLYLGKDPGKTHSLTE
CCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LAEILEKEGVQIPVKIKENLMVLSPHFIISRYPDAANGVPYKQYNKSIAEDLYNRVKEVI
HHHHHHHCCCEEEEEECCCEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
EWVKSEVSQQ
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA