Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

Click here to switch to the map view.

The map label for this gene is 15921821

Identifier: 15921821

GI number: 15921821

Start: 1520775

End: 1521302

Strand: Reverse

Name: 15921821

Synonym: ST1528

Alternate gene names: NA

Gene position: 1521302-1520775 (Counterclockwise)

Preceding gene: 15921823

Following gene: 15921819

Centisome position: 56.45

GC content: 29.73

Gene sequence:

>528_bases
ATGAAACTCCAAGGAATAGATATATCATCAATACTTAAGCCTGAAGCTAAGTATGTAATTCTTACTAAGAAGTTTGTATC
ATCATTAGCTGAAGATTATCCAGATTTTATATCATACAATGAGATGGGCATTAAACTAAGAGAATTAATTGTAGTTAGCA
AAAAAGGAATGTATACTGGTTATAAATATTCTATTACAGCGAATAAGGATGGTGGACTAACATCATTAATTGATGACGAC
AAAGTAATAATAGCCCTAAGAGCAAAAAAACTAGAAAAGTTCTTAACAGCAGAGCTTCGATTCTTAGGGTTTAAAAAAGA
CAATCTAGACAAGATTCTAATTCTGCATGATGTTCCAGTAATTGGAAATAATAGAGAAGAATTAATTAATGATATAAAAG
AATATCTTAAGCTTTGGAACGGTATTGAAATTTCAGATTTACCTGCTATAGTTAAACCAGAGTATAAGACTCCAGTAAAA
GGAAAAATATTAGACGTAGATTATGCAGATTTAGCTTTTACTGTTTGA

Upstream 100 bases:

>100_bases
GGAATTTATTTCTATATTTTAAATTGTTCATTTAGCTTATAAGCAAATTAAAGTTTGATTAAATGAAAAATAGATAAGAT
ATTAAAACGTATTTATACTT

Downstream 100 bases:

>100_bases
TTACTTCTTATTCTTTTTTGAAGTGTTATTATAGCTCTTGCTAATGCTTCTGGTCTAGTTGGACAGCCTGGGGCATAAAT
GTCTACTGGAATCCCAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKLQGIDISSILKPEAKYVILTKKFVSSLAEDYPDFISYNEMGIKLRELIVVSKKGMYTGYKYSITANKDGGLTSLIDDD
KVIIALRAKKLEKFLTAELRFLGFKKDNLDKILILHDVPVIGNNREELINDIKEYLKLWNGIEISDLPAIVKPEYKTPVK
GKILDVDYADLAFTV

Sequences:

>Translated_175_residues
MKLQGIDISSILKPEAKYVILTKKFVSSLAEDYPDFISYNEMGIKLRELIVVSKKGMYTGYKYSITANKDGGLTSLIDDD
KVIIALRAKKLEKFLTAELRFLGFKKDNLDKILILHDVPVIGNNREELINDIKEYLKLWNGIEISDLPAIVKPEYKTPVK
GKILDVDYADLAFTV
>Mature_175_residues
MKLQGIDISSILKPEAKYVILTKKFVSSLAEDYPDFISYNEMGIKLRELIVVSKKGMYTGYKYSITANKDGGLTSLIDDD
KVIIALRAKKLEKFLTAELRFLGFKKDNLDKILILHDVPVIGNNREELINDIKEYLKLWNGIEISDLPAIVKPEYKTPVK
GKILDVDYADLAFTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19861; Mature: 19861

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQGIDISSILKPEAKYVILTKKFVSSLAEDYPDFISYNEMGIKLRELIVVSKKGMYTG
CCCCCCCHHHHCCCCCCEEEEEHHHHHHHHHCCHHHHCCCCCCCEEEHEEEEECCCCCCC
YKYSITANKDGGLTSLIDDDKVIIALRAKKLEKFLTAELRFLGFKKDNLDKILILHDVPV
EEEEEEECCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCC
IGNNREELINDIKEYLKLWNGIEISDLPAIVKPEYKTPVKGKILDVDYADLAFTV
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCEEEECCHHHEEEEC
>Mature Secondary Structure
MKLQGIDISSILKPEAKYVILTKKFVSSLAEDYPDFISYNEMGIKLRELIVVSKKGMYTG
CCCCCCCHHHHCCCCCCEEEEEHHHHHHHHHCCHHHHCCCCCCCEEEHEEEEECCCCCCC
YKYSITANKDGGLTSLIDDDKVIIALRAKKLEKFLTAELRFLGFKKDNLDKILILHDVPV
EEEEEEECCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCC
IGNNREELINDIKEYLKLWNGIEISDLPAIVKPEYKTPVKGKILDVDYADLAFTV
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCEEEECCHHHEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA