| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is pmbA [C]
Identifier: 15921816
GI number: 15921816
Start: 1516608
End: 1517789
Strand: Direct
Name: pmbA [C]
Synonym: ST1523
Alternate gene names: 15921816
Gene position: 1516608-1517789 (Clockwise)
Preceding gene: 15921815
Following gene: 15921817
Centisome position: 56.28
GC content: 30.8
Gene sequence:
>1182_bases ATGGCAGAACTTAGAGCCGTTCAAATTAAAAGAGAAAGACAGTACCAAAACATGAATATTTTAGATAGAGGATATGGTAT TAGAATAATAAAAGATGGTAAGTTAGGCTTTGCATATGGTAATAGACTTGATAATCTTTTAGATTTAGCACTTGATAGCC TTCATGCGTCTAAAGAAGATAAATTTAATGTTTTACCATCTCCAGAAAAGATTAGTAAATTAAACTTAAAAATGTTTGAT ATAGTAAATGCACAAACTAAAATTAATGATTACTTAGCCTTTGGTGATGAGATAAGAGAATATGTCAACGTTGTATCCGA GTATTATGAAGTTATGAACTTAAAGGTTAAGATTGTTAGTTCAGAAGGAATTGATGTAGAGGAAGAGAGAAGTCTTTCCT CAATAAGTTTAAGTTTTAACATAAAGAATGATATTGAAATTAGCCCAGAAATATATGAATATGCAACAAGTAGATCTTTA AATATTAACATAGATAATCTTAAGGGTAATATTTTGAAAATGAAAGAAATATTTAAGAAGAAAAGGGTGAAATTAGAAAA ACCTATGTCAGAGGGGATTTTTACTCCTAAAGCACTTTCAGAGTTATTCTCTCCGTTATTTTCTCATGCAATCTCTTTAG AGAATTATTACAGAGGAAAATCGCCATTAAAAGAAGGAGAAATAATAAACGAGAAACTAGAAATAAGCGATAATCCTTTA ATACCTGAGGCCCCTTATAGTAGATCTTTTGATGCAGAGGGATTACCATCTAAGATAAACTACTTAATAAAAGATGGAAA AATTACTCAATTCTTATCAAATACTTACTGGAGTTTAAAGGCTAATAGAGAAAATACACATTCAGCTGCTAGGAACTACT CAGTTCTTCCTTATATTTCGCCTACAATATTAGATATAAATGTAAAAAGCGGTTCTGATAACGAAGGAATATTTATAGGT CAAGTACAAGGAGTTCATACTAGTAATTTTGATACTGGAGAATTCTCAGTAGTGATTCCCATAGCATGGAACGAAAAAGA AGGTACAGCATACAAGGAATTAACCTTATCTGGAAATCTAAAGGATTTCATTAAAGGTATTGAAGGTAGTGTAGGAGAGA AGACAATTTATGGTAATTTGAGTACTTCAGCACTCAGAGTGAAAAACGTTACCATCGTATGA
Upstream 100 bases:
>100_bases TACGTTTTAGTTGAAAATATGAAAGTTGGTGGTATAATTGAATGATGTATACACTATTGTCCAAAAAGGAAAGGAATTAG GTTATTCAATTGAAGTCTTT
Downstream 100 bases:
>100_bases AATATTTAAATTCTATCTATTCCATAAGAAAAGTGATGAATATGTTCAAAAAGATCCTCGTAGCTTATGATGGCTCAGAT CATGCGGCTAGAGCATTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MAELRAVQIKRERQYQNMNILDRGYGIRIIKDGKLGFAYGNRLDNLLDLALDSLHASKEDKFNVLPSPEKISKLNLKMFD IVNAQTKINDYLAFGDEIREYVNVVSEYYEVMNLKVKIVSSEGIDVEEERSLSSISLSFNIKNDIEISPEIYEYATSRSL NINIDNLKGNILKMKEIFKKKRVKLEKPMSEGIFTPKALSELFSPLFSHAISLENYYRGKSPLKEGEIINEKLEISDNPL IPEAPYSRSFDAEGLPSKINYLIKDGKITQFLSNTYWSLKANRENTHSAARNYSVLPYISPTILDINVKSGSDNEGIFIG QVQGVHTSNFDTGEFSVVIPIAWNEKEGTAYKELTLSGNLKDFIKGIEGSVGEKTIYGNLSTSALRVKNVTIV
Sequences:
>Translated_393_residues MAELRAVQIKRERQYQNMNILDRGYGIRIIKDGKLGFAYGNRLDNLLDLALDSLHASKEDKFNVLPSPEKISKLNLKMFD IVNAQTKINDYLAFGDEIREYVNVVSEYYEVMNLKVKIVSSEGIDVEEERSLSSISLSFNIKNDIEISPEIYEYATSRSL NINIDNLKGNILKMKEIFKKKRVKLEKPMSEGIFTPKALSELFSPLFSHAISLENYYRGKSPLKEGEIINEKLEISDNPL IPEAPYSRSFDAEGLPSKINYLIKDGKITQFLSNTYWSLKANRENTHSAARNYSVLPYISPTILDINVKSGSDNEGIFIG QVQGVHTSNFDTGEFSVVIPIAWNEKEGTAYKELTLSGNLKDFIKGIEGSVGEKTIYGNLSTSALRVKNVTIV >Mature_392_residues AELRAVQIKRERQYQNMNILDRGYGIRIIKDGKLGFAYGNRLDNLLDLALDSLHASKEDKFNVLPSPEKISKLNLKMFDI VNAQTKINDYLAFGDEIREYVNVVSEYYEVMNLKVKIVSSEGIDVEEERSLSSISLSFNIKNDIEISPEIYEYATSRSLN INIDNLKGNILKMKEIFKKKRVKLEKPMSEGIFTPKALSELFSPLFSHAISLENYYRGKSPLKEGEIINEKLEISDNPLI PEAPYSRSFDAEGLPSKINYLIKDGKITQFLSNTYWSLKANRENTHSAARNYSVLPYISPTILDINVKSGSDNEGIFIGQ VQGVHTSNFDTGEFSVVIPIAWNEKEGTAYKELTLSGNLKDFIKGIEGSVGEKTIYGNLSTSALRVKNVTIV
Specific function: May Facilitate The Secretion Of The Peptide Antibiotic Microcin B17 (Mccb17) By Completing Its Maturation. Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]
COG id: COG0312
COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002510 [H]
Pfam domain/function: PF01523 PmbA_TldD [H]
EC number: NA
Molecular weight: Translated: 44352; Mature: 44221
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELRAVQIKRERQYQNMNILDRGYGIRIIKDGKLGFAYGNRLDNLLDLALDSLHASKED CCCCHHHHHHHHHHHCCCCEEECCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHCCCCC KFNVLPSPEKISKLNLKMFDIVNAQTKINDYLAFGDEIREYVNVVSEYYEVMNLKVKIVS CCCCCCCHHHHHHCCEEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEEEE SEGIDVEEERSLSSISLSFNIKNDIEISPEIYEYATSRSLNINIDNLKGNILKMKEIFKK CCCCCCHHHCCCEEEEEEEEECCCCEECCHHHHHHCCCEEEEEEECCCCCCHHHHHHHHH KRVKLEKPMSEGIFTPKALSELFSPLFSHAISLENYYRGKSPLKEGEIINEKLEISDNPL HHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCC IPEAPYSRSFDAEGLPSKINYLIKDGKITQFLSNTYWSLKANRENTHSAARNYSVLPYIS CCCCCCCCCCCCCCCCHHHHEEEECCCHHHHHHCCEEEEECCCCCHHHHHHCCEECCCCC PTILDINVKSGSDNEGIFIGQVQGVHTSNFDTGEFSVVIPIAWNEKEGTAYKELTLSGNL CEEEEEEECCCCCCCCEEEEEEECEECCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCH KDFIKGIEGSVGEKTIYGNLSTSALRVKNVTIV HHHHHHCCCCCCCEEEEECCCCCEEEEEEEEEC >Mature Secondary Structure AELRAVQIKRERQYQNMNILDRGYGIRIIKDGKLGFAYGNRLDNLLDLALDSLHASKED CCCHHHHHHHHHHHCCCCEEECCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHCCCCC KFNVLPSPEKISKLNLKMFDIVNAQTKINDYLAFGDEIREYVNVVSEYYEVMNLKVKIVS CCCCCCCHHHHHHCCEEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEEEE SEGIDVEEERSLSSISLSFNIKNDIEISPEIYEYATSRSLNINIDNLKGNILKMKEIFKK CCCCCCHHHCCCEEEEEEEEECCCCEECCHHHHHHCCCEEEEEEECCCCCCHHHHHHHHH KRVKLEKPMSEGIFTPKALSELFSPLFSHAISLENYYRGKSPLKEGEIINEKLEISDNPL HHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCC IPEAPYSRSFDAEGLPSKINYLIKDGKITQFLSNTYWSLKANRENTHSAARNYSVLPYIS CCCCCCCCCCCCCCCCHHHHEEEECCCHHHHHHCCEEEEECCCCCHHHHHHCCEECCCCC PTILDINVKSGSDNEGIFIGQVQGVHTSNFDTGEFSVVIPIAWNEKEGTAYKELTLSGNL CEEEEEEECCCCCCCCEEEEEEECEECCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCH KDFIKGIEGSVGEKTIYGNLSTSALRVKNVTIV HHHHHHCCCCCCCEEEEECCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]