Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

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The map label for this gene is pmbA [C]

Identifier: 15921816

GI number: 15921816

Start: 1516608

End: 1517789

Strand: Direct

Name: pmbA [C]

Synonym: ST1523

Alternate gene names: 15921816

Gene position: 1516608-1517789 (Clockwise)

Preceding gene: 15921815

Following gene: 15921817

Centisome position: 56.28

GC content: 30.8

Gene sequence:

>1182_bases
ATGGCAGAACTTAGAGCCGTTCAAATTAAAAGAGAAAGACAGTACCAAAACATGAATATTTTAGATAGAGGATATGGTAT
TAGAATAATAAAAGATGGTAAGTTAGGCTTTGCATATGGTAATAGACTTGATAATCTTTTAGATTTAGCACTTGATAGCC
TTCATGCGTCTAAAGAAGATAAATTTAATGTTTTACCATCTCCAGAAAAGATTAGTAAATTAAACTTAAAAATGTTTGAT
ATAGTAAATGCACAAACTAAAATTAATGATTACTTAGCCTTTGGTGATGAGATAAGAGAATATGTCAACGTTGTATCCGA
GTATTATGAAGTTATGAACTTAAAGGTTAAGATTGTTAGTTCAGAAGGAATTGATGTAGAGGAAGAGAGAAGTCTTTCCT
CAATAAGTTTAAGTTTTAACATAAAGAATGATATTGAAATTAGCCCAGAAATATATGAATATGCAACAAGTAGATCTTTA
AATATTAACATAGATAATCTTAAGGGTAATATTTTGAAAATGAAAGAAATATTTAAGAAGAAAAGGGTGAAATTAGAAAA
ACCTATGTCAGAGGGGATTTTTACTCCTAAAGCACTTTCAGAGTTATTCTCTCCGTTATTTTCTCATGCAATCTCTTTAG
AGAATTATTACAGAGGAAAATCGCCATTAAAAGAAGGAGAAATAATAAACGAGAAACTAGAAATAAGCGATAATCCTTTA
ATACCTGAGGCCCCTTATAGTAGATCTTTTGATGCAGAGGGATTACCATCTAAGATAAACTACTTAATAAAAGATGGAAA
AATTACTCAATTCTTATCAAATACTTACTGGAGTTTAAAGGCTAATAGAGAAAATACACATTCAGCTGCTAGGAACTACT
CAGTTCTTCCTTATATTTCGCCTACAATATTAGATATAAATGTAAAAAGCGGTTCTGATAACGAAGGAATATTTATAGGT
CAAGTACAAGGAGTTCATACTAGTAATTTTGATACTGGAGAATTCTCAGTAGTGATTCCCATAGCATGGAACGAAAAAGA
AGGTACAGCATACAAGGAATTAACCTTATCTGGAAATCTAAAGGATTTCATTAAAGGTATTGAAGGTAGTGTAGGAGAGA
AGACAATTTATGGTAATTTGAGTACTTCAGCACTCAGAGTGAAAAACGTTACCATCGTATGA

Upstream 100 bases:

>100_bases
TACGTTTTAGTTGAAAATATGAAAGTTGGTGGTATAATTGAATGATGTATACACTATTGTCCAAAAAGGAAAGGAATTAG
GTTATTCAATTGAAGTCTTT

Downstream 100 bases:

>100_bases
AATATTTAAATTCTATCTATTCCATAAGAAAAGTGATGAATATGTTCAAAAAGATCCTCGTAGCTTATGATGGCTCAGAT
CATGCGGCTAGAGCATTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MAELRAVQIKRERQYQNMNILDRGYGIRIIKDGKLGFAYGNRLDNLLDLALDSLHASKEDKFNVLPSPEKISKLNLKMFD
IVNAQTKINDYLAFGDEIREYVNVVSEYYEVMNLKVKIVSSEGIDVEEERSLSSISLSFNIKNDIEISPEIYEYATSRSL
NINIDNLKGNILKMKEIFKKKRVKLEKPMSEGIFTPKALSELFSPLFSHAISLENYYRGKSPLKEGEIINEKLEISDNPL
IPEAPYSRSFDAEGLPSKINYLIKDGKITQFLSNTYWSLKANRENTHSAARNYSVLPYISPTILDINVKSGSDNEGIFIG
QVQGVHTSNFDTGEFSVVIPIAWNEKEGTAYKELTLSGNLKDFIKGIEGSVGEKTIYGNLSTSALRVKNVTIV

Sequences:

>Translated_393_residues
MAELRAVQIKRERQYQNMNILDRGYGIRIIKDGKLGFAYGNRLDNLLDLALDSLHASKEDKFNVLPSPEKISKLNLKMFD
IVNAQTKINDYLAFGDEIREYVNVVSEYYEVMNLKVKIVSSEGIDVEEERSLSSISLSFNIKNDIEISPEIYEYATSRSL
NINIDNLKGNILKMKEIFKKKRVKLEKPMSEGIFTPKALSELFSPLFSHAISLENYYRGKSPLKEGEIINEKLEISDNPL
IPEAPYSRSFDAEGLPSKINYLIKDGKITQFLSNTYWSLKANRENTHSAARNYSVLPYISPTILDINVKSGSDNEGIFIG
QVQGVHTSNFDTGEFSVVIPIAWNEKEGTAYKELTLSGNLKDFIKGIEGSVGEKTIYGNLSTSALRVKNVTIV
>Mature_392_residues
AELRAVQIKRERQYQNMNILDRGYGIRIIKDGKLGFAYGNRLDNLLDLALDSLHASKEDKFNVLPSPEKISKLNLKMFDI
VNAQTKINDYLAFGDEIREYVNVVSEYYEVMNLKVKIVSSEGIDVEEERSLSSISLSFNIKNDIEISPEIYEYATSRSLN
INIDNLKGNILKMKEIFKKKRVKLEKPMSEGIFTPKALSELFSPLFSHAISLENYYRGKSPLKEGEIINEKLEISDNPLI
PEAPYSRSFDAEGLPSKINYLIKDGKITQFLSNTYWSLKANRENTHSAARNYSVLPYISPTILDINVKSGSDNEGIFIGQ
VQGVHTSNFDTGEFSVVIPIAWNEKEGTAYKELTLSGNLKDFIKGIEGSVGEKTIYGNLSTSALRVKNVTIV

Specific function: May Facilitate The Secretion Of The Peptide Antibiotic Microcin B17 (Mccb17) By Completing Its Maturation. Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 44352; Mature: 44221

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELRAVQIKRERQYQNMNILDRGYGIRIIKDGKLGFAYGNRLDNLLDLALDSLHASKED
CCCCHHHHHHHHHHHCCCCEEECCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHCCCCC
KFNVLPSPEKISKLNLKMFDIVNAQTKINDYLAFGDEIREYVNVVSEYYEVMNLKVKIVS
CCCCCCCHHHHHHCCEEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEEEE
SEGIDVEEERSLSSISLSFNIKNDIEISPEIYEYATSRSLNINIDNLKGNILKMKEIFKK
CCCCCCHHHCCCEEEEEEEEECCCCEECCHHHHHHCCCEEEEEEECCCCCCHHHHHHHHH
KRVKLEKPMSEGIFTPKALSELFSPLFSHAISLENYYRGKSPLKEGEIINEKLEISDNPL
HHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCC
IPEAPYSRSFDAEGLPSKINYLIKDGKITQFLSNTYWSLKANRENTHSAARNYSVLPYIS
CCCCCCCCCCCCCCCCHHHHEEEECCCHHHHHHCCEEEEECCCCCHHHHHHCCEECCCCC
PTILDINVKSGSDNEGIFIGQVQGVHTSNFDTGEFSVVIPIAWNEKEGTAYKELTLSGNL
CEEEEEEECCCCCCCCEEEEEEECEECCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCH
KDFIKGIEGSVGEKTIYGNLSTSALRVKNVTIV
HHHHHHCCCCCCCEEEEECCCCCEEEEEEEEEC
>Mature Secondary Structure 
AELRAVQIKRERQYQNMNILDRGYGIRIIKDGKLGFAYGNRLDNLLDLALDSLHASKED
CCCHHHHHHHHHHHCCCCEEECCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHCCCCC
KFNVLPSPEKISKLNLKMFDIVNAQTKINDYLAFGDEIREYVNVVSEYYEVMNLKVKIVS
CCCCCCCHHHHHHCCEEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEEEE
SEGIDVEEERSLSSISLSFNIKNDIEISPEIYEYATSRSLNINIDNLKGNILKMKEIFKK
CCCCCCHHHCCCEEEEEEEEECCCCEECCHHHHHHCCCEEEEEEECCCCCCHHHHHHHHH
KRVKLEKPMSEGIFTPKALSELFSPLFSHAISLENYYRGKSPLKEGEIINEKLEISDNPL
HHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCC
IPEAPYSRSFDAEGLPSKINYLIKDGKITQFLSNTYWSLKANRENTHSAARNYSVLPYIS
CCCCCCCCCCCCCCCCHHHHEEEECCCHHHHHHCCEEEEECCCCCHHHHHHCCEECCCCC
PTILDINVKSGSDNEGIFIGQVQGVHTSNFDTGEFSVVIPIAWNEKEGTAYKELTLSGNL
CEEEEEEECCCCCCCCEEEEEEECEECCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCH
KDFIKGIEGSVGEKTIYGNLSTSALRVKNVTIV
HHHHHHCCCCCCCEEEEECCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]