| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is ubiA [C]
Identifier: 15921742
GI number: 15921742
Start: 1455361
End: 1456197
Strand: Reverse
Name: ubiA [C]
Synonym: ST1451
Alternate gene names: 15921742
Gene position: 1456197-1455361 (Counterclockwise)
Preceding gene: 15921743
Following gene: 15921740
Centisome position: 54.04
GC content: 30.11
Gene sequence:
>837_bases ATGTCAGTAAAAGCTTATTTTGAACTTGTAAGAATACATAACGTTATAGGCTCTGCTATTTCCGTATTTATGGGCTATGT TGTTGCTTCTGAATGGAAAATAGTACCAATAAAACTTATCCTTGCAATGATTGTTGTTTCTGTTATCGCTGCTGGAGGCT ACATAATTAATGATGTTTTTGATATCGAGATTGATAAAATAAATAAACCAAATAGACCCTTACCATCGGGTAGGATAAAA ATCTCAAGAGCTAGATCATTATCAATAGTTTTGTTTTTAGTTGGTATAGTATTATCAGTTTTACTAAACATTTATGCATT TATAATAGCTTTACTAACTGTTTTAGCTTTATATTACTATGCTAAAGACTTAAAGAAACAAGGATTAGTAGGTAATTTAA TAGTAGCCTTAACATCGGCTCTTTCAGCATTTTACGGAGGTCTGGCATTTTTTGAAGGATCATGGGTTATTAGGACATTA ATACCCACATTATACATATTTTTCTTCACTTTAACTAGAGAATTCGTAAAGGGAATAGAAGATGTAAAGGGTGATATGAC TAATGGTGTCAAGACGCTTGCAGTAAGAGTAGGTATTGAGAAGACTTGGTTTATATCTAAAATTATACTGGTAATACTCA TAGTAACATCTTTTATTCCTTATTTCTTTGGGTTCAACATAATTTACTTAATTGGAATATTATTCTTGGACATTATACTT ATCCTAGTAGTATTACTAAGACATGATATAGAAAGTGCTTCAAAAGCTAGAGCTTATATGAAAGTTTATGCTTTAGGAAC ATTAATTTTATTTGCATTAGGAACATTACCTATTTAA
Upstream 100 bases:
>100_bases CGAAATAACATTCTTAAAGTACTTTTCAGCTTTTTCAATTTCTTCTTGTGATACCACTAAAATCACCTTTTTAATTTCCT AGTAAATCAATATATGAAAA
Downstream 100 bases:
>100_bases CACATTTATATCAAAAATCTTTCTATATCCTGCTTTTATTCCTACAACTCTAAGATTTAAATTTCCCTTAGAATTATTCA GAGGAATTTTATATTCAATA
Product: (S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase
Products: NA
Alternate protein names: DGGGP synthase; DGGGPS; (S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase; Geranylgeranylglycerol-phosphate geranylgeranyltransferase
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSVKAYFELVRIHNVIGSAISVFMGYVVASEWKIVPIKLILAMIVVSVIAAGGYIINDVFDIEIDKINKPNRPLPSGRIK ISRARSLSIVLFLVGIVLSVLLNIYAFIIALLTVLALYYYAKDLKKQGLVGNLIVALTSALSAFYGGLAFFEGSWVIRTL IPTLYIFFFTLTREFVKGIEDVKGDMTNGVKTLAVRVGIEKTWFISKIILVILIVTSFIPYFFGFNIIYLIGILFLDIIL ILVVLLRHDIESASKARAYMKVYALGTLILFALGTLPI
Sequences:
>Translated_278_residues MSVKAYFELVRIHNVIGSAISVFMGYVVASEWKIVPIKLILAMIVVSVIAAGGYIINDVFDIEIDKINKPNRPLPSGRIK ISRARSLSIVLFLVGIVLSVLLNIYAFIIALLTVLALYYYAKDLKKQGLVGNLIVALTSALSAFYGGLAFFEGSWVIRTL IPTLYIFFFTLTREFVKGIEDVKGDMTNGVKTLAVRVGIEKTWFISKIILVILIVTSFIPYFFGFNIIYLIGILFLDIIL ILVVLLRHDIESASKARAYMKVYALGTLILFALGTLPI >Mature_277_residues SVKAYFELVRIHNVIGSAISVFMGYVVASEWKIVPIKLILAMIVVSVIAAGGYIINDVFDIEIDKINKPNRPLPSGRIKI SRARSLSIVLFLVGIVLSVLLNIYAFIIALLTVLALYYYAKDLKKQGLVGNLIVALTSALSAFYGGLAFFEGSWVIRTLI PTLYIFFFTLTREFVKGIEDVKGDMTNGVKTLAVRVGIEKTWFISKIILVILIVTSFIPYFFGFNIIYLIGILFLDIILI LVVLLRHDIESASKARAYMKVYALGTLILFALGTLPI
Specific function: Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesi
COG id: COG0382
COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ubiA prenyltransferase family. DGGGP synthase subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DGGGP_SULTO (Q971A3)
Other databases:
- EMBL: BA000023 - RefSeq: NP_377411.1 - GeneID: 1459484 - GenomeReviews: BA000023_GR - KEGG: sto:ST1451 - NMPDR: fig|273063.1.peg.1579 - HOGENOM: HBG667825 - OMA: INRPERP - ProtClustDB: PRK09573 - BioCyc: STOK273063:ST1451-MONOMER - HAMAP: MF_01286 - InterPro: IPR000537
Pfam domain/function: PF01040 UbiA
EC number: =2.5.1.42
Molecular weight: Translated: 30910; Mature: 30779
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xb8842f0)-; HASH(0xec43968)-; HASH(0xf0d5134)-; HASH(0xcc43040)-; HASH(0xde67fd4)-; HASH(0xe607e6c)-; HASH(0xe81ad48)-; HASH(0xeb70568)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKAYFELVRIHNVIGSAISVFMGYVVASEWKIVPIKLILAMIVVSVIAAGGYIINDVF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHE DIEIDKINKPNRPLPSGRIKISRARSLSIVLFLVGIVLSVLLNIYAFIIALLTVLALYYY EEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKDLKKQGLVGNLIVALTSALSAFYGGLAFFEGSWVIRTLIPTLYIFFFTLTREFVKGIE HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DVKGDMTNGVKTLAVRVGIEKTWFISKIILVILIVTSFIPYFFGFNIIYLIGILFLDIIL HHCCHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILVVLLRHDIESASKARAYMKVYALGTLILFALGTLPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH >Mature Secondary Structure SVKAYFELVRIHNVIGSAISVFMGYVVASEWKIVPIKLILAMIVVSVIAAGGYIINDVF CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHE DIEIDKINKPNRPLPSGRIKISRARSLSIVLFLVGIVLSVLLNIYAFIIALLTVLALYYY EEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKDLKKQGLVGNLIVALTSALSAFYGGLAFFEGSWVIRTLIPTLYIFFFTLTREFVKGIE HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DVKGDMTNGVKTLAVRVGIEKTWFISKIILVILIVTSFIPYFFGFNIIYLIGILFLDIIL HHCCHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILVVLLRHDIESASKARAYMKVYALGTLILFALGTLPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11572479