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The map label for this gene is albA2

Identifier: 15921556

GI number: 15921556

Start: 1287436

End: 1287708

Strand: Reverse

Name: albA2

Synonym: STS142

Alternate gene names: 15921556

Gene position: 1287708-1287436 (Counterclockwise)

Preceding gene: 15921557

Following gene: 15921554

Centisome position: 47.79

GC content: 28.57

Gene sequence:

>273_bases
ATGACTGTGAAAAAGCCAAATGAAATTTTAATAAGTAGAACAAAAAGGGTAGAAGATTATGTTTTAGATGTAATAGTTAT
GTTTAATCAAGGATATGATGAAGTAGAACTTAAGGGTGTTGGAAATAGTATATATAAAGCCGTTGAAGTCTATAATCAAC
TTAAAGATAGACTTGGAGATGGTATAATTTTAGAAAAAGCTGATATAGGAAGCGAAGTAAAAGACAGAAGAAGAATATCA
TACATTAGTATCAAGCTTAAGAGAGTTTACTAA

Upstream 100 bases:

>100_bases
ATTTGGATGATGAAGCCCTTAAATATGATCGGTGATAAAGGCCCGTGTTACTGATAGACAGATTTATTTTTCTTCCTTTA
TAATCCACTAACGATATAAA

Downstream 100 bases:

>100_bases
TTTTCCAGATATTTGTGTAATCTCCTTGTGTAAATCTTCTAGTACATAGTCGACATTTACATCACCATTTGCTATTTTAT
CTATTTTCTGTAATAACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MTVKKPNEILISRTKRVEDYVLDVIVMFNQGYDEVELKGVGNSIYKAVEVYNQLKDRLGDGIILEKADIGSEVKDRRRIS
YISIKLKRVY

Sequences:

>Translated_90_residues
MTVKKPNEILISRTKRVEDYVLDVIVMFNQGYDEVELKGVGNSIYKAVEVYNQLKDRLGDGIILEKADIGSEVKDRRRIS
YISIKLKRVY
>Mature_89_residues
TVKKPNEILISRTKRVEDYVLDVIVMFNQGYDEVELKGVGNSIYKAVEVYNQLKDRLGDGIILEKADIGSEVKDRRRISY
ISIKLKRVY

Specific function: Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May

COG id: COG1581

COG function: function code K; Archaeal DNA-binding protein

Gene ontology:

Cell location: Cytoplasm (Probable). Chromosome (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the histone-like Alba family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ALBA2_SULTO (Q971T6)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_377225.1
- ProteinModelPortal:   Q971T6
- SMR:   Q971T6
- GeneID:   1459292
- GenomeReviews:   BA000023_GR
- KEGG:   sto:STS142
- HOGENOM:   HBG727709
- OMA:   KDRRRIS
- ProtClustDB:   CLSK802941
- BioCyc:   STOK273063:STS142-MONOMER
- GO:   GO:0005694
- GO:   GO:0005737
- HAMAP:   MF_01122
- InterPro:   IPR013795
- InterPro:   IPR002775

Pfam domain/function: PF01918 Alba

EC number: NA

Molecular weight: Translated: 10437; Mature: 10306

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKKPNEILISRTKRVEDYVLDVIVMFNQGYDEVELKGVGNSIYKAVEVYNQLKDRLGD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCC
GIILEKADIGSEVKDRRRISYISIKLKRVY
CEEEECCCCCCHHHHHHHEEEEEEEEEECC
>Mature Secondary Structure 
TVKKPNEILISRTKRVEDYVLDVIVMFNQGYDEVELKGVGNSIYKAVEVYNQLKDRLGD
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCC
GIILEKADIGSEVKDRRRISYISIKLKRVY
CEEEECCCCCCHHHHHHHEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479