Click here to switch to the map view.

The map label for this gene is 15921428

Identifier: 15921428

GI number: 15921428

Start: 1171749

End: 1172057

Strand: Reverse

Name: 15921428

Synonym: ST1171

Alternate gene names: NA

Gene position: 1172057-1171749 (Counterclockwise)

Preceding gene: 15921430

Following gene: 15921427

Centisome position: 43.49

GC content: 31.39

Gene sequence:

>309_bases
ATGCTAACTTTTACTCAAATAAACGGTTACCCCGTAATGGTTTATAATAAAGATGGAATTAACTACTATTGGTTAGCTGG
TTGTCCTCATAAGAAAAGACCTTTAAATGATGCAAAAGTTTATGATGATAAAATTGAGTGCCCCTTTCATCATGCAGTTT
TTAGTTTAATTTCTGGAGAATTATTAACTCCTCCAAAGTCTAAAACACCTTGTATAAATTGCAAACTCGTAAGGATTATA
GTTAGTAATGACAAGATAAGTTTTGAAGGTGAGCCTTTTATTCCACAATTACCAGATAAAAAGTCTTAG

Upstream 100 bases:

>100_bases
AGAATATAGCAGTATTACCATAAATTCTTCGGTTAGTACTATCTGTTATTTCTCTAAGCTAAAAATTAACTATTTATGCT
TCTTCTTTAGATTACTTATC

Downstream 100 bases:

>100_bases
AAGACAGTTTCCTCACTTTCTTTTATGTCTTTAACGTAATATATTACTTAATCTTGATATATAGATAATCATTTATAAGG
ACTTTTAACATTAGAATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: Rieske Domain Protein

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MLTFTQINGYPVMVYNKDGINYYWLAGCPHKKRPLNDAKVYDDKIECPFHHAVFSLISGELLTPPKSKTPCINCKLVRII
VSNDKISFEGEPFIPQLPDKKS

Sequences:

>Translated_102_residues
MLTFTQINGYPVMVYNKDGINYYWLAGCPHKKRPLNDAKVYDDKIECPFHHAVFSLISGELLTPPKSKTPCINCKLVRII
VSNDKISFEGEPFIPQLPDKKS
>Mature_102_residues
MLTFTQINGYPVMVYNKDGINYYWLAGCPHKKRPLNDAKVYDDKIECPFHHAVFSLISGELLTPPKSKTPCINCKLVRII
VSNDKISFEGEPFIPQLPDKKS

Specific function: Unknown

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11628; Mature: 11628

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTFTQINGYPVMVYNKDGINYYWLAGCPHKKRPLNDAKVYDDKIECPFHHAVFSLISGE
CEEEEEECCEEEEEEECCCCCEEEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCC
LLTPPKSKTPCINCKLVRIIVSNDKISFEGEPFIPQLPDKKS
EECCCCCCCCEECEEEEEEEEECCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MLTFTQINGYPVMVYNKDGINYYWLAGCPHKKRPLNDAKVYDDKIECPFHHAVFSLISGE
CEEEEEECCEEEEEEECCCCCEEEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCC
LLTPPKSKTPCINCKLVRIIVSNDKISFEGEPFIPQLPDKKS
EECCCCCCCCEECEEEEEEEEECCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA