| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15921385
Identifier: 15921385
GI number: 15921385
Start: 1122201
End: 1123784
Strand: Reverse
Name: 15921385
Synonym: ST1128
Alternate gene names: NA
Gene position: 1123784-1122201 (Counterclockwise)
Preceding gene: 15921386
Following gene: 15921383
Centisome position: 41.7
GC content: 33.65
Gene sequence:
>1584_bases ATGATAAAAATGAATAAAAATATTTTAATTGCTATATTAACTATACTTATAATAGTTGCAGGAATAAGTGGGTATTTAGT AGGTAAAACAGAGAATGGTAATGCCACTAGTACTACAACAACTGTAACAAAAACAATAGAGCAAGTTGTTCCTTCTCCAG TTTCTGATCCAGCAAATTTAGGTAATGGCGAGGATTATCTGATTAATCCCGTATTTCCAGACCATACTATTGCTTCTCAA TACGCCTACGTTACACCGGGAGAGGGTTTAGTTTTTATAGGAAACCCATACCTATCTGGAAATGGTTATTTAGCTGGCGC TAAAGGTGCTGCAGTGATAGCTTCTATGTTAGCTTATCAACCATTAACAGAATATAATTACTACTTATACATTAACTCGC CTTATTGTATTAACGTACCTGGTGCTGTGAAAACAGATTCTGCAACTGTAATGTATCTAGCTTCAATGTTAAATCAACAA TCAGAACTAAATAAATCATTGTACTTCTTAGGTGATGTTGGTTTGGAAGGTTATATGTATTCAACCGGTGTAGTTTACCA AAGAATTGTACAATTATACCAAGGAGGGATTTATTATCTCGTAGTACCTCAAATGATGGCATTAGCTGAAGGTCAAAATT ACCAAATGGCTTTACAATTTGCAAAAGAACACCATGAAGTGCTCTACACGGTTTCTTCAATACCTCAAATATACCAGATA ACCACTGGAAGTAAATTACCAACTCCTTCTGGTTACATAGACTTTCCAATAAACTTTAGTATTGGTTATCTATATCTAGA ACATCTTTACCAGCAACTTTACAACAGCAGTACTAATGTAACGGCTAAGCAATTAGCTCAAAAGTATTGGAGTGAAGCAC AGAAATTAGCAAATGAAGGAAATTATACGGCATTCTATTTCTTACCTAACCCAGCAGTAGAAGCAATACAGATCTTATAT CAACCTTACTACAACTTATCTTTAGAAGTGCAAGAGGCAATCAATAATGCAAGTACCTTAAGCAATTTATGGAAAATTGA AACAGCATCAGAGGCAGCGTATTTATCACATGGAAATATAACGGAACAAATACTCGCAAATGCATGGGCTGCTTTAAGTT TATCAATTAATGTAGGACCAACAATAACGCCATATGGATTTTATCAAGGGTTATATAACGCATTCTTGACTGATTTATAT GCAGCAGAGTACCTAGATGCTGTAACTAACTCCCATTATGGAAACATCACTTTACTAATTCAAATCTATAGAAATCCAAA TGTAATATATGACTTTGGTTTCTTTACAAATTATTATGCGATGATGGCTATTCAATTTAGAGACTACTTCCTAAAGCAAC TTAATTCAACAGACCAAGCTGTAGTACTAAATTCAATATACTCTTATATGGCTAATGAGACACAAATACTTGAAAATGCA GCAGCTTATTTCGATGGACCATCTATTGTTGGTTATATGATGATGAATTATGGATTACAAACACACAATCTTGATCTACT ATATTACTCAATGCCATATATAAGATTTGTAATGAATACTGAAGAACTAACGTGGTATATCTAA
Upstream 100 bases:
>100_bases CTATTTTAATAGGAATTTCAGTGTATAGTAAAAGGAAACATTCATTCAACTCAATTAGAGATTTGGGTAAAAATTTTTAA ACAAATTAAATCATCTTTAA
Downstream 100 bases:
>100_bases GTTAAATTTTTTTATTTGTTCATGTAATTAAAAGATCAAATCTTTAGAGGCGTGAATATTTCGTCTATAAGCATTATCAT ATAACCGGCTAATTTTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 527; Mature: 527
Protein sequence:
>527_residues MIKMNKNILIAILTILIIVAGISGYLVGKTENGNATSTTTTVTKTIEQVVPSPVSDPANLGNGEDYLINPVFPDHTIASQ YAYVTPGEGLVFIGNPYLSGNGYLAGAKGAAVIASMLAYQPLTEYNYYLYINSPYCINVPGAVKTDSATVMYLASMLNQQ SELNKSLYFLGDVGLEGYMYSTGVVYQRIVQLYQGGIYYLVVPQMMALAEGQNYQMALQFAKEHHEVLYTVSSIPQIYQI TTGSKLPTPSGYIDFPINFSIGYLYLEHLYQQLYNSSTNVTAKQLAQKYWSEAQKLANEGNYTAFYFLPNPAVEAIQILY QPYYNLSLEVQEAINNASTLSNLWKIETASEAAYLSHGNITEQILANAWAALSLSINVGPTITPYGFYQGLYNAFLTDLY AAEYLDAVTNSHYGNITLLIQIYRNPNVIYDFGFFTNYYAMMAIQFRDYFLKQLNSTDQAVVLNSIYSYMANETQILENA AAYFDGPSIVGYMMMNYGLQTHNLDLLYYSMPYIRFVMNTEELTWYI
Sequences:
>Translated_527_residues MIKMNKNILIAILTILIIVAGISGYLVGKTENGNATSTTTTVTKTIEQVVPSPVSDPANLGNGEDYLINPVFPDHTIASQ YAYVTPGEGLVFIGNPYLSGNGYLAGAKGAAVIASMLAYQPLTEYNYYLYINSPYCINVPGAVKTDSATVMYLASMLNQQ SELNKSLYFLGDVGLEGYMYSTGVVYQRIVQLYQGGIYYLVVPQMMALAEGQNYQMALQFAKEHHEVLYTVSSIPQIYQI TTGSKLPTPSGYIDFPINFSIGYLYLEHLYQQLYNSSTNVTAKQLAQKYWSEAQKLANEGNYTAFYFLPNPAVEAIQILY QPYYNLSLEVQEAINNASTLSNLWKIETASEAAYLSHGNITEQILANAWAALSLSINVGPTITPYGFYQGLYNAFLTDLY AAEYLDAVTNSHYGNITLLIQIYRNPNVIYDFGFFTNYYAMMAIQFRDYFLKQLNSTDQAVVLNSIYSYMANETQILENA AAYFDGPSIVGYMMMNYGLQTHNLDLLYYSMPYIRFVMNTEELTWYI >Mature_527_residues MIKMNKNILIAILTILIIVAGISGYLVGKTENGNATSTTTTVTKTIEQVVPSPVSDPANLGNGEDYLINPVFPDHTIASQ YAYVTPGEGLVFIGNPYLSGNGYLAGAKGAAVIASMLAYQPLTEYNYYLYINSPYCINVPGAVKTDSATVMYLASMLNQQ SELNKSLYFLGDVGLEGYMYSTGVVYQRIVQLYQGGIYYLVVPQMMALAEGQNYQMALQFAKEHHEVLYTVSSIPQIYQI TTGSKLPTPSGYIDFPINFSIGYLYLEHLYQQLYNSSTNVTAKQLAQKYWSEAQKLANEGNYTAFYFLPNPAVEAIQILY QPYYNLSLEVQEAINNASTLSNLWKIETASEAAYLSHGNITEQILANAWAALSLSINVGPTITPYGFYQGLYNAFLTDLY AAEYLDAVTNSHYGNITLLIQIYRNPNVIYDFGFFTNYYAMMAIQFRDYFLKQLNSTDQAVVLNSIYSYMANETQILENA AAYFDGPSIVGYMMMNYGLQTHNLDLLYYSMPYIRFVMNTEELTWYI
Specific function: Unknown
COG id: COG1750
COG function: function code R; Archaeal serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59050; Mature: 59050
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKMNKNILIAILTILIIVAGISGYLVGKTENGNATSTTTTVTKTIEQVVPSPVSDPANL CEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC GNGEDYLINPVFPDHTIASQYAYVTPGEGLVFIGNPYLSGNGYLAGAKGAAVIASMLAYQ CCCCCEEEECCCCCCHHHCCEEEEECCCCEEEECCEEECCCCEEECCCHHHHHHHHHHHC PLTEYNYYLYINSPYCINVPGAVKTDSATVMYLASMLNQQSELNKSLYFLGDVGLEGYMY CHHHCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEE STGVVYQRIVQLYQGGIYYLVVPQMMALAEGQNYQMALQFAKEHHEVLYTVSSIPQIYQI CCHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHEEEHHCCCEEEEE TTGSKLPTPSGYIDFPINFSIGYLYLEHLYQQLYNSSTNVTAKQLAQKYWSEAQKLANEG ECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC NYTAFYFLPNPAVEAIQILYQPYYNLSLEVQEAINNASTLSNLWKIETASEAAYLSHGNI CEEEEEECCCCHHHHHHHHHCCCCCCEEEHHHHHCCHHHHHHHHEEECCCCEEEEECCCH TEQILANAWAALSLSINVGPTITPYGFYQGLYNAFLTDLYAAEYLDAVTNSHYGNITLLI HHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE QIYRNPNVIYDFGFFTNYYAMMAIQFRDYFLKQLNSTDQAVVLNSIYSYMANETQILENA EEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHH AAYFDGPSIVGYMMMNYGLQTHNLDLLYYSMPYIRFVMNTEELTWYI HHHCCCCHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCEEEEC >Mature Secondary Structure MIKMNKNILIAILTILIIVAGISGYLVGKTENGNATSTTTTVTKTIEQVVPSPVSDPANL CEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC GNGEDYLINPVFPDHTIASQYAYVTPGEGLVFIGNPYLSGNGYLAGAKGAAVIASMLAYQ CCCCCEEEECCCCCCHHHCCEEEEECCCCEEEECCEEECCCCEEECCCHHHHHHHHHHHC PLTEYNYYLYINSPYCINVPGAVKTDSATVMYLASMLNQQSELNKSLYFLGDVGLEGYMY CHHHCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEE STGVVYQRIVQLYQGGIYYLVVPQMMALAEGQNYQMALQFAKEHHEVLYTVSSIPQIYQI CCHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHEEEHHCCCEEEEE TTGSKLPTPSGYIDFPINFSIGYLYLEHLYQQLYNSSTNVTAKQLAQKYWSEAQKLANEG ECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC NYTAFYFLPNPAVEAIQILYQPYYNLSLEVQEAINNASTLSNLWKIETASEAAYLSHGNI CEEEEEECCCCHHHHHHHHHCCCCCCEEEHHHHHCCHHHHHHHHEEECCCCEEEEECCCH TEQILANAWAALSLSINVGPTITPYGFYQGLYNAFLTDLYAAEYLDAVTNSHYGNITLLI HHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE QIYRNPNVIYDFGFFTNYYAMMAIQFRDYFLKQLNSTDQAVVLNSIYSYMANETQILENA EEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHH AAYFDGPSIVGYMMMNYGLQTHNLDLLYYSMPYIRFVMNTEELTWYI HHHCCCCHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA