| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15921232
Identifier: 15921232
GI number: 15921232
Start: 965801
End: 967003
Strand: Direct
Name: 15921232
Synonym: ST0988
Alternate gene names: NA
Gene position: 965801-967003 (Clockwise)
Preceding gene: 15921230
Following gene: 15921233
Centisome position: 35.84
GC content: 34.83
Gene sequence:
>1203_bases GTGATAAAGCCAGAACTTTGCGTTAAATGTAAAGCTTCTAAATACTTGTGTGGTCTAACCTATTGTCCTTTGTTAGTATC AGCTAGAGTAAAAGAAAAAATTAATTTACTGAAAACGAGAGTTTATGGTTCTTCTCCACCTACCGTATTTGTTGGAAGAA GTAGTTACCCTAAAATATTCGTTTATCCTTCAACACCTCCAACGTTAGGAGATACTAGTCACTATGAAGATCCTAAGTTT TGGCTTAATTCCAGTTTAGACGATTTCCTATCAACAAGACTTTCGTTAATTAGAGGAGGAATAAAATATCACGTTAGCTC GGCTAATGATCCAGACAGAGTATTATTAGATATTCAAACTTTAGCAATCTCCTCAAAACCTGTAACCATAGAATTATCCT TAAAGAGGTCTCCTTCTGGAAAGATTTTAGATGATAATTTACCACCTTTAGGTCCTTCAGCACCTCTAGAGAAAATTAGG ATTGATGAAGATTCTCAACCCTTAAAGATAGTTGAAAAGGTCTATTTTGATAAAGACCTAAAGGCCGAAGAGGGGATTGT AACACTTTACGACTATGGTGTTGATGTGGAGAAAATAGCTAAGATATTAAGTGTTGGAGGAATTGGAGTAAAGAGAAGAT TAGTCCCTACTAGGTGGAGTATAACAGCTGTTGATAAAACAATTTCCGATAATTTAATTGAAAAAATAAAACAGTATGAG AGTGTAGATAAGGTTGAAGTATACGTTAGGAGTTTCAGAAAAAACCTATTTATAGCCATACTAGTACCGGGATATTGGAG TTTTGAATGGGGAGAAGCCTGGTTTCCAGGTAGTACTTGGAATAAATGGGGTAAAAGCATTGAAATAGAAGTAGATAATG AGGGTTATAAAGGAAGGGATGATTATCCAAAAATTGGAGGGTGCTACTATGCTTCAAGATTAGCAGTCTCAGAGTTTTTG GCATCTAGAAAAAGACAAGCTACCGCAATTTTATGGAGGGAAATATATGAAGGCTTTTATTTACCTATTGGTGTTTGGTT TGTAAGAGAGAACATTAGAGAACTCTTTAAACAGAAGCCCATTATTTTTGATAGAGTAGAAGATGCTATCACTTTCGTTA AGGATATAATGAAGTCCGATATAAACAGATGGCTTAAGAGATCCTTATTATCTAGAGAAAAAATAACCAGATGGTTGAAG TAA
Upstream 100 bases:
>100_bases TCCAATACATTTCTATAGTTGTTAGGAATAAGGGGAAAAATCGTAATACTCAATCTATTATATAATACAACTTTTATACT TCTTCAATAACATAAACACA
Downstream 100 bases:
>100_bases TTTGGGAATTAGGTGATTGAAATTATCGTAAAGAGTATTAGGGTTAAAACAGCCTTAAGTAAGTCGAGATTAAAGGAATT AGACTATAGCTTAAACCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MIKPELCVKCKASKYLCGLTYCPLLVSARVKEKINLLKTRVYGSSPPTVFVGRSSYPKIFVYPSTPPTLGDTSHYEDPKF WLNSSLDDFLSTRLSLIRGGIKYHVSSANDPDRVLLDIQTLAISSKPVTIELSLKRSPSGKILDDNLPPLGPSAPLEKIR IDEDSQPLKIVEKVYFDKDLKAEEGIVTLYDYGVDVEKIAKILSVGGIGVKRRLVPTRWSITAVDKTISDNLIEKIKQYE SVDKVEVYVRSFRKNLFIAILVPGYWSFEWGEAWFPGSTWNKWGKSIEIEVDNEGYKGRDDYPKIGGCYYASRLAVSEFL ASRKRQATAILWREIYEGFYLPIGVWFVRENIRELFKQKPIIFDRVEDAITFVKDIMKSDINRWLKRSLLSREKITRWLK
Sequences:
>Translated_400_residues MIKPELCVKCKASKYLCGLTYCPLLVSARVKEKINLLKTRVYGSSPPTVFVGRSSYPKIFVYPSTPPTLGDTSHYEDPKF WLNSSLDDFLSTRLSLIRGGIKYHVSSANDPDRVLLDIQTLAISSKPVTIELSLKRSPSGKILDDNLPPLGPSAPLEKIR IDEDSQPLKIVEKVYFDKDLKAEEGIVTLYDYGVDVEKIAKILSVGGIGVKRRLVPTRWSITAVDKTISDNLIEKIKQYE SVDKVEVYVRSFRKNLFIAILVPGYWSFEWGEAWFPGSTWNKWGKSIEIEVDNEGYKGRDDYPKIGGCYYASRLAVSEFL ASRKRQATAILWREIYEGFYLPIGVWFVRENIRELFKQKPIIFDRVEDAITFVKDIMKSDINRWLKRSLLSREKITRWLK >Mature_400_residues MIKPELCVKCKASKYLCGLTYCPLLVSARVKEKINLLKTRVYGSSPPTVFVGRSSYPKIFVYPSTPPTLGDTSHYEDPKF WLNSSLDDFLSTRLSLIRGGIKYHVSSANDPDRVLLDIQTLAISSKPVTIELSLKRSPSGKILDDNLPPLGPSAPLEKIR IDEDSQPLKIVEKVYFDKDLKAEEGIVTLYDYGVDVEKIAKILSVGGIGVKRRLVPTRWSITAVDKTISDNLIEKIKQYE SVDKVEVYVRSFRKNLFIAILVPGYWSFEWGEAWFPGSTWNKWGKSIEIEVDNEGYKGRDDYPKIGGCYYASRLAVSEFL ASRKRQATAILWREIYEGFYLPIGVWFVRENIRELFKQKPIIFDRVEDAITFVKDIMKSDINRWLKRSLLSREKITRWLK
Specific function: Unknown
COG id: COG1602
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45887; Mature: 45887
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKPELCVKCKASKYLCGLTYCPLLVSARVKEKINLLKTRVYGSSPPTVFVGRSSYPKIF CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEE VYPSTPPTLGDTSHYEDPKFWLNSSLDDFLSTRLSLIRGGIKYHVSSANDPDRVLLDIQT EECCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEE LAISSKPVTIELSLKRSPSGKILDDNLPPLGPSAPLEKIRIDEDSQPLKIVEKVYFDKDL HEECCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCHHEEECCCCCHHHHHHHHHCCCCC KAEEGIVTLYDYGVDVEKIAKILSVGGIGVKRRLVPTRWSITAVDKTISDNLIEKIKQYE CCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHHH SVDKVEVYVRSFRKNLFIAILVPGYWSFEWGEAWFPGSTWNKWGKSIEIEVDNEGYKGRD CHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEECCCCCHHHCCCEEEEEECCCCCCCCC DYPKIGGCYYASRLAVSEFLASRKRQATAILWREIYEGFYLPIGVWFVRENIRELFKQKP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHCC IIFDRVEDAITFVKDIMKSDINRWLKRSLLSREKITRWLK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIKPELCVKCKASKYLCGLTYCPLLVSARVKEKINLLKTRVYGSSPPTVFVGRSSYPKIF CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEE VYPSTPPTLGDTSHYEDPKFWLNSSLDDFLSTRLSLIRGGIKYHVSSANDPDRVLLDIQT EECCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEE LAISSKPVTIELSLKRSPSGKILDDNLPPLGPSAPLEKIRIDEDSQPLKIVEKVYFDKDL HEECCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCHHEEECCCCCHHHHHHHHHCCCCC KAEEGIVTLYDYGVDVEKIAKILSVGGIGVKRRLVPTRWSITAVDKTISDNLIEKIKQYE CCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHHH SVDKVEVYVRSFRKNLFIAILVPGYWSFEWGEAWFPGSTWNKWGKSIEIEVDNEGYKGRD CHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEECCCCCHHHCCCEEEEEECCCCCCCCC DYPKIGGCYYASRLAVSEFLASRKRQATAILWREIYEGFYLPIGVWFVRENIRELFKQKP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHCC IIFDRVEDAITFVKDIMKSDINRWLKRSLLSREKITRWLK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA