Click here to switch to the map view.

The map label for this gene is ybjZ [C]

Identifier: 15921140

GI number: 15921140

Start: 883174

End: 884445

Strand: Direct

Name: ybjZ [C]

Synonym: ST0904

Alternate gene names: 15921140

Gene position: 883174-884445 (Clockwise)

Preceding gene: 15921139

Following gene: 15921145

Centisome position: 32.77

GC content: 36.71

Gene sequence:

>1272_bases
ATGAAAGCCAATGATATAATTTGGTTAGCGTACAAAGGTTTAATATCAAGAAAAGCTATAGCTATTTTAGCTGTAATTGC
AGTCTTAATAGGAGTTGCTAGCGTTACTATCTTAGTAGCCTTTACTCAAGGAGTTAGCCAGTCAATTCTCTCAATAGTCG
AATCCCTAGGTCCTAAAACTATCTTAGTTTTACCGGCTAGAGGTGAAGGTTTAACACAGGCTACAGTAGTTAGCCTTGAA
GGTTTACCAGATATAGAAGCAATTTACCCAATTGTTAGCGGATTTGGATCAATAAATATTGAGGGACAAAGTATGGGAGT
TACAATTATAGGAATTAATAACCTTTCAGCGTTATTAGGTCAAGTATTATTAACATCTGGCACTATATATCCGCCAGTTA
CAACACCAGAAGCAGTTATTGGATCCCAAGTTGCTAATCCTTTGCCCGGAGTATTTATAACTCCTGGCGATACTATAACA
GTACAAATTGGAAGAGATGAGACAGTACCTATAGAAGTAGTAGGTGTTTTATCTCCTTCTGGTGCAAATCCGTTGTCAAA
CTCTGAAACATCAATATTCTTACCACTAAGTGAGGCAATGGCTATCTTAAATAGAACAACATATAGTGAGATAATTATAG
AGGCTGATAGTGTTAATGATGTAAATACCGTGGCTACATTAATTCAGGATATTTATGGTAATGAGCTTAGTGTAATTACA
GTTCAGCAACTTATCAACACTGTATCAACGATAACTGGTGGATTTAGCTTCTTACTTATTTCAGTAGCCTCAATATCTCT
ATTTGTAGGAGCAATAGGAATAATGGGTATAATGTTAAGTAGAGTTTATCAAAGGATTAGAGAAATAGGAATAATGAAAA
CATTAGGCTTAACCACTAGGGACGTACTGCTCGTTTTCCTTACAGAATCTGGAATAATTGGGTTATTAGGTGGAATTGCA
GGGATTTTGGTAGGTTTAATCGGAACATCATTCTTCGACATTATCTCGTCTTTTACAAGTACCACGTCTATTCCGAATAG
TAATGAAGGATTTGGAGCGGCGGGTAGAGGAGGATTTGGAGCAGGGTTTGGAGGTAGAGGGTTTGGAAGAGCGGCTAGTT
CTATATCATCGTTTACCTTTAAGCCTATAATATCTGTTGAAGCTATTGCAATAGCTTTAGCTGTAGCTATAATAGTAAGC
TTAATTGCTGGAATATATCCAGCTTGGAAAGCATCAAAACTCACAGTAATTGACGCTATTAGAAGAGACTAA

Upstream 100 bases:

>100_bases
CAACTACTCATGGTAGGTTCTTTACTCTTATAGGAATACTTATACTAGTAGTTATAGTGATAGTCGTCGTAGTATTAGTG
TTAAGGAGGAGGAGAAAAGA

Downstream 100 bases:

>100_bases
CCATTTAATCTACTACCTTTTTTCTTCATTTTATGATCATAAGTAAGTATTTTAAGCTTCAATCTTCTAGCCAGAGAAAT
TATCATATAGTCATTAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MKANDIIWLAYKGLISRKAIAILAVIAVLIGVASVTILVAFTQGVSQSILSIVESLGPKTILVLPARGEGLTQATVVSLE
GLPDIEAIYPIVSGFGSINIEGQSMGVTIIGINNLSALLGQVLLTSGTIYPPVTTPEAVIGSQVANPLPGVFITPGDTIT
VQIGRDETVPIEVVGVLSPSGANPLSNSETSIFLPLSEAMAILNRTTYSEIIIEADSVNDVNTVATLIQDIYGNELSVIT
VQQLINTVSTITGGFSFLLISVASISLFVGAIGIMGIMLSRVYQRIREIGIMKTLGLTTRDVLLVFLTESGIIGLLGGIA
GILVGLIGTSFFDIISSFTSTTSIPNSNEGFGAAGRGGFGAGFGGRGFGRAASSISSFTFKPIISVEAIAIALAVAIIVS
LIAGIYPAWKASKLTVIDAIRRD

Sequences:

>Translated_423_residues
MKANDIIWLAYKGLISRKAIAILAVIAVLIGVASVTILVAFTQGVSQSILSIVESLGPKTILVLPARGEGLTQATVVSLE
GLPDIEAIYPIVSGFGSINIEGQSMGVTIIGINNLSALLGQVLLTSGTIYPPVTTPEAVIGSQVANPLPGVFITPGDTIT
VQIGRDETVPIEVVGVLSPSGANPLSNSETSIFLPLSEAMAILNRTTYSEIIIEADSVNDVNTVATLIQDIYGNELSVIT
VQQLINTVSTITGGFSFLLISVASISLFVGAIGIMGIMLSRVYQRIREIGIMKTLGLTTRDVLLVFLTESGIIGLLGGIA
GILVGLIGTSFFDIISSFTSTTSIPNSNEGFGAAGRGGFGAGFGGRGFGRAASSISSFTFKPIISVEAIAIALAVAIIVS
LIAGIYPAWKASKLTVIDAIRRD
>Mature_423_residues
MKANDIIWLAYKGLISRKAIAILAVIAVLIGVASVTILVAFTQGVSQSILSIVESLGPKTILVLPARGEGLTQATVVSLE
GLPDIEAIYPIVSGFGSINIEGQSMGVTIIGINNLSALLGQVLLTSGTIYPPVTTPEAVIGSQVANPLPGVFITPGDTIT
VQIGRDETVPIEVVGVLSPSGANPLSNSETSIFLPLSEAMAILNRTTYSEIIIEADSVNDVNTVATLIQDIYGNELSVIT
VQQLINTVSTITGGFSFLLISVASISLFVGAIGIMGIMLSRVYQRIREIGIMKTLGLTTRDVLLVFLTESGIIGLLGGIA
GILVGLIGTSFFDIISSFTSTTSIPNSNEGFGAAGRGGFGAGFGGRGFGRAASSISSFTFKPIISVEAIAIALAVAIIVS
LIAGIYPAWKASKLTVIDAIRRD

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=442, Percent_Identity=22.8506787330317, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 43767; Mature: 43767

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKANDIIWLAYKGLISRKAIAILAVIAVLIGVASVTILVAFTQGVSQSILSIVESLGPKT
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
ILVLPARGEGLTQATVVSLEGLPDIEAIYPIVSGFGSINIEGQSMGVTIIGINNLSALLG
EEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCEEEEEEEECCHHHHHHH
QVLLTSGTIYPPVTTPEAVIGSQVANPLPGVFITPGDTITVQIGRDETVPIEVVGVLSPS
HHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCCCCEEEEEEECCC
GANPLSNSETSIFLPLSEAMAILNRTTYSEIIIEADSVNDVNTVATLIQDIYGNELSVIT
CCCCCCCCCCEEEEEHHHHHHHHHCCCHHHEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
VQQLINTVSTITGGFSFLLISVASISLFVGAIGIMGIMLSRVYQRIREIGIMKTLGLTTR
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
DVLLVFLTESGIIGLLGGIAGILVGLIGTSFFDIISSFTSTTSIPNSNEGFGAAGRGGFG
HEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
AGFGGRGFGRAASSISSFTFKPIISVEAIAIALAVAIIVSLIAGIYPAWKASKLTVIDAI
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
RRD
HCC
>Mature Secondary Structure
MKANDIIWLAYKGLISRKAIAILAVIAVLIGVASVTILVAFTQGVSQSILSIVESLGPKT
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
ILVLPARGEGLTQATVVSLEGLPDIEAIYPIVSGFGSINIEGQSMGVTIIGINNLSALLG
EEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCEEEEEEEECCHHHHHHH
QVLLTSGTIYPPVTTPEAVIGSQVANPLPGVFITPGDTITVQIGRDETVPIEVVGVLSPS
HHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCCCCEEEEEEECCC
GANPLSNSETSIFLPLSEAMAILNRTTYSEIIIEADSVNDVNTVATLIQDIYGNELSVIT
CCCCCCCCCCEEEEEHHHHHHHHHCCCHHHEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
VQQLINTVSTITGGFSFLLISVASISLFVGAIGIMGIMLSRVYQRIREIGIMKTLGLTTR
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
DVLLVFLTESGIIGLLGGIAGILVGLIGTSFFDIISSFTSTTSIPNSNEGFGAAGRGGFG
HEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
AGFGGRGFGRAASSISSFTFKPIISVEAIAIALAVAIIVSLIAGIYPAWKASKLTVIDAI
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
RRD
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]