| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15921122
Identifier: 15921122
GI number: 15921122
Start: 861786
End: 862508
Strand: Reverse
Name: 15921122
Synonym: ST0886
Alternate gene names: NA
Gene position: 862508-861786 (Counterclockwise)
Preceding gene: 15921123
Following gene: 15921117
Centisome position: 32.01
GC content: 30.15
Gene sequence:
>723_bases ATGATTCACGTTATTATACCAGCTTATAATGAAGAACGAAGAATTTCGCAAACACTTTCCTTGATAAAACAGAAATTTCC TGACGTTGAAATATTAGTGATATTTGAGGGAACGGATAATACTCCAGAGATAGTAAGGAAGTTTGGGGGAATTGTGTATG AAAATAAGACTAGATTAGGTAAGGGTGGATCAATAAAAATTGGATTAGAACTAGTTAAGGGAGAGAGAGCTTTAATCATT GACGCAGATTTACCCACCACAGAAATAGAAAGGGTAATCAGCGAGAATGCAGACCTTGTAATTGGTTTTAGAGATCTAAG CAGTATGCCACCTAAAAGGAGATTTTTACATTATGGTTATATGCTCTTAGTTAAACTCTTCTTTCCCTCTTTAAGAAAAT TTAATGATATTCAATCTGGAATCAAGTTTATAAACGTAAGTAAGGCTAAGGAGATCCTTGATGAGCTAATTATGAATGAT TACGTTTTTGATACAAACCTAGTTTATGCTTTTGTTAGAAAAGGATACTCCGTAAAAGAAATACCTATTTCATATAATCA TAGGGAAGAAGACAGTAAAATATCTAAGAATTTAATTAAAATGATAATATTTATGTTCTTGTCGTTAGTTAAACTTCGTA TATATTATTCACCCTTTAAAAGAATAATATACACAAAAACATTTTTAAAAGTACAAAATTGGTTAATCAATAAATTAAGA TGA
Upstream 100 bases:
>100_bases TTTTGGGTTTCTATCAATTATTATTCCAGTAATTATTAGCGGAATAGATATTGTGATAATAAAGAGAAAAATTTTTAAAT AGAATAATTTACAAGTATCT
Downstream 100 bases:
>100_bases TGATAGGTCCGAAGACTAATTGGTGAAGAGATCGATCCTTTCTGATAACAACTTATTATTTCATAAAAATTTTAATTAAA TAGTTTAAAAAATACTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MIHVIIPAYNEERRISQTLSLIKQKFPDVEILVIFEGTDNTPEIVRKFGGIVYENKTRLGKGGSIKIGLELVKGERALII DADLPTTEIERVISENADLVIGFRDLSSMPPKRRFLHYGYMLLVKLFFPSLRKFNDIQSGIKFINVSKAKEILDELIMND YVFDTNLVYAFVRKGYSVKEIPISYNHREEDSKISKNLIKMIIFMFLSLVKLRIYYSPFKRIIYTKTFLKVQNWLINKLR
Sequences:
>Translated_240_residues MIHVIIPAYNEERRISQTLSLIKQKFPDVEILVIFEGTDNTPEIVRKFGGIVYENKTRLGKGGSIKIGLELVKGERALII DADLPTTEIERVISENADLVIGFRDLSSMPPKRRFLHYGYMLLVKLFFPSLRKFNDIQSGIKFINVSKAKEILDELIMND YVFDTNLVYAFVRKGYSVKEIPISYNHREEDSKISKNLIKMIIFMFLSLVKLRIYYSPFKRIIYTKTFLKVQNWLINKLR >Mature_240_residues MIHVIIPAYNEERRISQTLSLIKQKFPDVEILVIFEGTDNTPEIVRKFGGIVYENKTRLGKGGSIKIGLELVKGERALII DADLPTTEIERVISENADLVIGFRDLSSMPPKRRFLHYGYMLLVKLFFPSLRKFNDIQSGIKFINVSKAKEILDELIMND YVFDTNLVYAFVRKGYSVKEIPISYNHREEDSKISKNLIKMIIFMFLSLVKLRIYYSPFKRIIYTKTFLKVQNWLINKLR
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6325029, Length=233, Percent_Identity=27.0386266094421, Blast_Score=75, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 28035; Mature: 28035
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHVIIPAYNEERRISQTLSLIKQKFPDVEILVIFEGTDNTPEIVRKFGGIVYENKTRLG CEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHCCEEEECCCCCC KGGSIKIGLELVKGERALIIDADLPTTEIERVISENADLVIGFRDLSSMPPKRRFLHYGY CCCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHHHHH MLLVKLFFPSLRKFNDIQSGIKFINVSKAKEILDELIMNDYVFDTNLVYAFVRKGYSVKE HHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCEEECHHHHHHHHHCCCCEEE IPISYNHREEDSKISKNLIKMIIFMFLSLVKLRIYYSPFKRIIYTKTFLKVQNWLINKLR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIHVIIPAYNEERRISQTLSLIKQKFPDVEILVIFEGTDNTPEIVRKFGGIVYENKTRLG CEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHCCEEEECCCCCC KGGSIKIGLELVKGERALIIDADLPTTEIERVISENADLVIGFRDLSSMPPKRRFLHYGY CCCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHHHHH MLLVKLFFPSLRKFNDIQSGIKFINVSKAKEILDELIMNDYVFDTNLVYAFVRKGYSVKE HHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCEEECHHHHHHHHHCCCCEEE IPISYNHREEDSKISKNLIKMIIFMFLSLVKLRIYYSPFKRIIYTKTFLKVQNWLINKLR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]