| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is yfeJ [H]
Identifier: 15921096
GI number: 15921096
Start: 837322
End: 837972
Strand: Reverse
Name: yfeJ [H]
Synonym: ST0862
Alternate gene names: 15921096
Gene position: 837972-837322 (Counterclockwise)
Preceding gene: 15921098
Following gene: 15921089
Centisome position: 31.1
GC content: 32.1
Gene sequence:
>651_bases ATGTTTTTAGGAATTATAAATCATCCAATTGAAAGATTAGGAAACATAAAGGATATCTTAGAAGAAAAAGGGTATAAGAT AAGAGAAACTGTTGCAACAGAAATAAGAGGTAATGAAGAATTCGACGCTCTTATAGTAATGGGTGGTCCAATGGGAGTTT ATGAAAGTGATAAATATCCGTTCTTAAAAGTTGAGAGTGAACTAATAAGAAAAGCTATAAGTACGAAAAAACCAGTACTC GGAGTATGTTTAGGTTCGCAATTGCTTTCCTCATCCCTCGGAGGAACTGTAACAAGAGGGGTATTTGGTCAAGAAATTGG AATTTATACTGTTTATCTTTTAGATGAATTTCGAAATTTGATGGGTGATAAGATAGAAGTTTTTCAGTGGCACGGTGATA CTTTTACATTACCTAATAATGCTAAACTTTTAGCTTATAATGAAAGATATTTTCAAGCATTTAAATACAAGACAGCAATT GGTCTTCAATTTCATGTTGAAGTTAACAGTAAAATGGTTAGTGAGTGGGTAAAAGAGTATAATGGTGATCTAGGTTTAAT AGATCAAGTGAAAGAGAAAGAAGAGGAATTTAGAAAAATTAGTGAAAAAATCATCTCTTTTTGGTTAGATTCAGTTCGGG GCTCTCAATAA
Upstream 100 bases:
>100_bases ATATTAAATATAAGCAACCTTAACTATACTACGAGTTCTTTGTTATTTTTTACTCTTAATGATGAAAATATTTAAAAAGC GTTTATGAGAGTTAGTCTGC
Downstream 100 bases:
>100_bases TAAAAATCACCAATCTTTCATGGGCAGCCTCATCATCCTTTAATTTCCTCTAATGACTTTCCTTTTGTTAATACACCAAA GTATAATATAAATACTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MFLGIINHPIERLGNIKDILEEKGYKIRETVATEIRGNEEFDALIVMGGPMGVYESDKYPFLKVESELIRKAISTKKPVL GVCLGSQLLSSSLGGTVTRGVFGQEIGIYTVYLLDEFRNLMGDKIEVFQWHGDTFTLPNNAKLLAYNERYFQAFKYKTAI GLQFHVEVNSKMVSEWVKEYNGDLGLIDQVKEKEEEFRKISEKIISFWLDSVRGSQ
Sequences:
>Translated_216_residues MFLGIINHPIERLGNIKDILEEKGYKIRETVATEIRGNEEFDALIVMGGPMGVYESDKYPFLKVESELIRKAISTKKPVL GVCLGSQLLSSSLGGTVTRGVFGQEIGIYTVYLLDEFRNLMGDKIEVFQWHGDTFTLPNNAKLLAYNERYFQAFKYKTAI GLQFHVEVNSKMVSEWVKEYNGDLGLIDQVKEKEEEFRKISEKIISFWLDSVRGSQ >Mature_216_residues MFLGIINHPIERLGNIKDILEEKGYKIRETVATEIRGNEEFDALIVMGGPMGVYESDKYPFLKVESELIRKAISTKKPVL GVCLGSQLLSSSLGGTVTRGVFGQEIGIYTVYLLDEFRNLMGDKIEVFQWHGDTFTLPNNAKLLAYNERYFQAFKYKTAI GLQFHVEVNSKMVSEWVKEYNGDLGLIDQVKEKEEEFRKISEKIISFWLDSVRGSQ
Specific function: Unknown
COG id: COG0518
COG function: function code F; GMP synthase - Glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: NA
Molecular weight: Translated: 24661; Mature: 24661
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLGIINHPIERLGNIKDILEEKGYKIRETVATEIRGNEEFDALIVMGGPMGVYESDKYP CEECCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCC FLKVESELIRKAISTKKPVLGVCLGSQLLSSSLGGTVTRGVFGQEIGIYTVYLLDEFRNL EEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHH MGDKIEVFQWHGDTFTLPNNAKLLAYNERYFQAFKYKTAIGLQFHVEVNSKMVSEWVKEY CCCCEEEEEEECCEEECCCCCEEEEEHHHHHHHHHHHEEEEEEEEEEHHHHHHHHHHHHH NGDLGLIDQVKEKEEEFRKISEKIISFWLDSVRGSQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFLGIINHPIERLGNIKDILEEKGYKIRETVATEIRGNEEFDALIVMGGPMGVYESDKYP CEECCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCC FLKVESELIRKAISTKKPVLGVCLGSQLLSSSLGGTVTRGVFGQEIGIYTVYLLDEFRNL EEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHH MGDKIEVFQWHGDTFTLPNNAKLLAYNERYFQAFKYKTAIGLQFHVEVNSKMVSEWVKEY CCCCEEEEEEECCEEECCCCCEEEEEHHHHHHHHHHHEEEEEEEEEEHHHHHHHHHHHHH NGDLGLIDQVKEKEEEFRKISEKIISFWLDSVRGSQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7612925; 11677609 [H]