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The map label for this gene is yvrC [H]

Identifier: 15921075

GI number: 15921075

Start: 817182

End: 818171

Strand: Reverse

Name: yvrC [H]

Synonym: ST0840

Alternate gene names: 15921075

Gene position: 818171-817182 (Counterclockwise)

Preceding gene: 15921087

Following gene: 15921072

Centisome position: 30.36

GC content: 33.43

Gene sequence:

>990_bases
ATGGATGACTTATCCATACGCATGAAAATTTGGGGCATAGTTTTAGCAGTCGTTGTTATTATAGCGATCCTAGCTGGTGT
TATCTATACATATATGAGAGCTAATAATAATGTAAGCACAACATCTTCTCATAACCTTAGGATTATTAGTTTAGCTCCTA
GCGATACTCAAGTTTTAATAGCGTTGGGATTAGGTAAATACATTGTAGGTATTGACTATTACTCATATTCACTACTAAAA
TACCTTAACTTAACAAGTCAAGTACCGGCGAATGTTACAGTTTTTTCACAAATATATCCACCTAACATCTCTGGCTTATT
ACTTTTACATCCTAGTATAGTAGTTGTTGAATACGGTTTAGAAGCTCCCTATATTTCACAGATGGAAAAGGCCGGACTAA
ATGTTTTAGTTACTAACAGTGATTATGCTTATTCTTTCTCTCAGATAGAGGAAAATATAATGGAAATTGCTAAATATTTT
AACGTTACTCAACAAGGAGAGGAGTTAATTAATTGGATGAATAAGAAGATTGCTGATTTTTCTACCTTAGGGAATACAAC
AATAGCTTACATGCTTTACATCTGTCCTAACCTAGATTTCTATACTGCTGGCGGTAATGTATTTATAAACAGTATTATTG
TTCAAGGTGGAGGGATCAACGTTTTCTCTACTTACTCTGATTATCCATTACTCTCTCCAGATGAACTCCTAGTTTCCAAT
CCTCAAGTAATCATAGCCCAAGAGGTTAGTAACTTTTCTTATACAGAATCATTAATTTCTCAAATACCCGGGATTAAGAA
TGTTAAGGCTTTTAACGCAAGCCGTATATATATTCTAGGTAATTTGGCTACGGATTTATTAAATGAACCAGGACCATTAT
CAGTATATGCAATTTTGATGGTACATGATATAATTAATTCTACCGCACCTAAGTACGTTACTGCTTCTTGGGTTAAAGAA
AACTTAAATATTGAGCTACCTATTTTTTAG

Upstream 100 bases:

>100_bases
TGGTAACAACGTGATGAAGAGGTATTTTAGCACATATTAGGATAACTTAACCATATTAAAAATTTTTCTCCTTTTGTTCA
TGTGAAAAAGTATTTAATAT

Downstream 100 bases:

>100_bases
GGGTTTACTTGAGAATTAAATATCCTTTTTTATAACTTAATTTTTTAAGTATTTCAATTTTTTATTGTTATAAATCACAG
TAACTAGCCTTAACTTACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MDDLSIRMKIWGIVLAVVVIIAILAGVIYTYMRANNNVSTTSSHNLRIISLAPSDTQVLIALGLGKYIVGIDYYSYSLLK
YLNLTSQVPANVTVFSQIYPPNISGLLLLHPSIVVVEYGLEAPYISQMEKAGLNVLVTNSDYAYSFSQIEENIMEIAKYF
NVTQQGEELINWMNKKIADFSTLGNTTIAYMLYICPNLDFYTAGGNVFINSIIVQGGGINVFSTYSDYPLLSPDELLVSN
PQVIIAQEVSNFSYTESLISQIPGIKNVKAFNASRIYILGNLATDLLNEPGPLSVYAILMVHDIINSTAPKYVTASWVKE
NLNIELPIF

Sequences:

>Translated_329_residues
MDDLSIRMKIWGIVLAVVVIIAILAGVIYTYMRANNNVSTTSSHNLRIISLAPSDTQVLIALGLGKYIVGIDYYSYSLLK
YLNLTSQVPANVTVFSQIYPPNISGLLLLHPSIVVVEYGLEAPYISQMEKAGLNVLVTNSDYAYSFSQIEENIMEIAKYF
NVTQQGEELINWMNKKIADFSTLGNTTIAYMLYICPNLDFYTAGGNVFINSIIVQGGGINVFSTYSDYPLLSPDELLVSN
PQVIIAQEVSNFSYTESLISQIPGIKNVKAFNASRIYILGNLATDLLNEPGPLSVYAILMVHDIINSTAPKYVTASWVKE
NLNIELPIF
>Mature_329_residues
MDDLSIRMKIWGIVLAVVVIIAILAGVIYTYMRANNNVSTTSSHNLRIISLAPSDTQVLIALGLGKYIVGIDYYSYSLLK
YLNLTSQVPANVTVFSQIYPPNISGLLLLHPSIVVVEYGLEAPYISQMEKAGLNVLVTNSDYAYSFSQIEENIMEIAKYF
NVTQQGEELINWMNKKIADFSTLGNTTIAYMLYICPNLDFYTAGGNVFINSIIVQGGGINVFSTYSDYPLLSPDELLVSN
PQVIIAQEVSNFSYTESLISQIPGIKNVKAFNASRIYILGNLATDLLNEPGPLSVYAILMVHDIINSTAPKYVTASWVKE
NLNIELPIF

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 36371; Mature: 36371

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDLSIRMKIWGIVLAVVVIIAILAGVIYTYMRANNNVSTTSSHNLRIISLAPSDTQVLI
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEE
ALGLGKYIVGIDYYSYSLLKYLNLTSQVPANVTVFSQIYPPNISGLLLLHPSIVVVEYGL
EEECCCEEEEEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEECCCEEEEEECC
EAPYISQMEKAGLNVLVTNSDYAYSFSQIEENIMEIAKYFNVTQQGEELINWMNKKIADF
CCCHHHHHHHCCCEEEEECCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
STLGNTTIAYMLYICPNLDFYTAGGNVFINSIIVQGGGINVFSTYSDYPLLSPDELLVSN
HHCCCHHEEEEEEECCCCCEEECCCCEEEEEEEEECCCEEEEECCCCCCCCCCCHHEECC
PQVIIAQEVSNFSYTESLISQIPGIKNVKAFNASRIYILGNLATDLLNEPGPLSVYAILM
CCEEEEEECCCCHHHHHHHHHCCCCCCEEEECCCEEEEEECHHHHHCCCCCCHHHHHHHH
VHDIINSTAPKYVTASWVKENLNIELPIF
HHHHHHCCCCCCEEHHHHHCCCCEEECCC
>Mature Secondary Structure
MDDLSIRMKIWGIVLAVVVIIAILAGVIYTYMRANNNVSTTSSHNLRIISLAPSDTQVLI
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEE
ALGLGKYIVGIDYYSYSLLKYLNLTSQVPANVTVFSQIYPPNISGLLLLHPSIVVVEYGL
EEECCCEEEEEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEECCCEEEEEECC
EAPYISQMEKAGLNVLVTNSDYAYSFSQIEENIMEIAKYFNVTQQGEELINWMNKKIADF
CCCHHHHHHHCCCEEEEECCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
STLGNTTIAYMLYICPNLDFYTAGGNVFINSIIVQGGGINVFSTYSDYPLLSPDELLVSN
HHCCCHHEEEEEEECCCCCEEECCCCEEEEEEEEECCCEEEEECCCCCCCCCCCHHEECC
PQVIIAQEVSNFSYTESLISQIPGIKNVKAFNASRIYILGNLATDLLNEPGPLSVYAILM
CCEEEEEECCCCHHHHHHHHHCCCCCCEEEECCCEEEEEECHHHHHCCCCCCHHHHHHHH
VHDIINSTAPKYVTASWVKENLNIELPIF
HHHHHHCCCCCCEEHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]