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The map label for this gene is lrs14 [H]

Identifier: 15921071

GI number: 15921071

Start: 815198

End: 815569

Strand: Reverse

Name: lrs14 [H]

Synonym: ST0837

Alternate gene names: 15921071

Gene position: 815569-815198 (Counterclockwise)

Preceding gene: 15921072

Following gene: 15921067

Centisome position: 30.27

GC content: 31.72

Gene sequence:

>372_bases
ATGAGTGAAAAAATTTCATTGCCAGACGGAAGAGAAGTTGATCTTCATGAGTTTATAGCATTTATGTATGGTTTATCAAC
CAGTGACGTTGAAGTCTTACATTTGCTTATGGAAAGCAAGGAAAAACTTGATGCAGATGAAATTGCTGAAAAGTTAAAAG
TGACAAAAGCCTCAGTAAGTAAATCACTAAATAATTTATTAGATAAGGGTTTAATAGAAAGAGATAAGGCTGAAGAAGCA
GAGAAGAAAAAAGGAAGACCTAGTTATGTGTATTGGGTGGATAAAGATAAATTAATCTATAAGTTAGAGAAGGATCTAGA
GAAATTAGCTAGTAGTATGAAAGAAGGATTGGAAAAACATATACCACAATAA

Upstream 100 bases:

>100_bases
TAGCTACTATGTTAAAAAATATACAAAAGTAGACATTTGAACATAAATGTATAAATTTGTTTACATACTTTATTTAAATT
AAAAACGCGTATTTATACTC

Downstream 100 bases:

>100_bases
TTTTTAAATAGTCATTTTAATATTATTTTTCTCATATGATAACTGAGTCTGGAATAATAAGTATGGTCGTAGCATTCATT
CTAGGTTTACTTATAGGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MSEKISLPDGREVDLHEFIAFMYGLSTSDVEVLHLLMESKEKLDADEIAEKLKVTKASVSKSLNNLLDKGLIERDKAEEA
EKKKGRPSYVYWVDKDKLIYKLEKDLEKLASSMKEGLEKHIPQ

Sequences:

>Translated_123_residues
MSEKISLPDGREVDLHEFIAFMYGLSTSDVEVLHLLMESKEKLDADEIAEKLKVTKASVSKSLNNLLDKGLIERDKAEEA
EKKKGRPSYVYWVDKDKLIYKLEKDLEKLASSMKEGLEKHIPQ
>Mature_122_residues
SEKISLPDGREVDLHEFIAFMYGLSTSDVEVLHLLMESKEKLDADEIAEKLKVTKASVSKSLNNLLDKGLIERDKAEEAE
KKKGRPSYVYWVDKDKLIYKLEKDLEKLASSMKEGLEKHIPQ

Specific function: Acts in transcription regulation. Binds to multiple sequences in its own promoter [H]

COG id: COG3355

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002831
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01978 TrmB [H]

EC number: NA

Molecular weight: Translated: 14095; Mature: 13964

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKISLPDGREVDLHEFIAFMYGLSTSDVEVLHLLMESKEKLDADEIAEKLKVTKASVS
CCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KSLNNLLDKGLIERDKAEEAEKKKGRPSYVYWVDKDKLIYKLEKDLEKLASSMKEGLEKH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
IPQ
CCC
>Mature Secondary Structure 
SEKISLPDGREVDLHEFIAFMYGLSTSDVEVLHLLMESKEKLDADEIAEKLKVTKASVS
CCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KSLNNLLDKGLIERDKAEEAEKKKGRPSYVYWVDKDKLIYKLEKDLEKLASSMKEGLEKH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
IPQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10049378; 11427726 [H]