| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is yfbK [C]
Identifier: 15921064
GI number: 15921064
Start: 807260
End: 808405
Strand: Direct
Name: yfbK [C]
Synonym: ST0830
Alternate gene names: 15921064
Gene position: 807260-808405 (Clockwise)
Preceding gene: 15921063
Following gene: 15921065
Centisome position: 29.96
GC content: 33.07
Gene sequence:
>1146_bases GTGATTTTTTTGACAATCTCAGCTAGGCTAGAGTTTAGTCATAAGTACTCTTTTACCTCACCTGTTAGGGGAGTTTTTAG ATTAATTTTAGTCCCAGAAAGAGTATCCGTTGCAACTGGATTTCATTATATAATTTTATTAGATACCTCTGGATCAATGG CTGGAATTAAGATAGAGACGGCAAAACAAGGTGCATTACAGTTATTAAATAAAATTCCTCCAGGAAATAAAATTACATTT ATTACATTTTCTTCTACAGTAAATACTTTGATTGAATTCGCAGATACCTCAGGGTCTGTAGGTGAGACAATTTCTAGTGT AACAGCTCAAGGTAACACTGTATTATATACTGCTTTGTCAACTGCTATTCAAATAGCTAAAAAGCACGGAATACCAGGTT ATATTATTTTACTAACAGACGGTAATCCAACAGATTTAACAAATACTGACGCATACGAAAAACTTCAATTCCCAGATGGG TTTAAGGTAATTTCATTTGGTATTGGTGATGATTATAATGAGCAGTTACTTAAGGTTTTAGCGGATAAAACTGGCGGTAT TCTTAATCATATTCAAGATCCAATGGAGATAGCGAATTCTTTACCTCAAGCCGCTGTGACTCAAGTAGGTGCTAAAAATG TCATAGTAGAAATAAACTCACCATCACAAGTTAAGTTATTAAATTATTCTGGACCACCAGTTAAATTAGGAGCTATAGAA GGAGTTGTTAGAATATTTGGTGAAACGTCTATTCCACCAAACTTTAATGGAAATATATTAGATGTAAAAATAACTTATGA AGATCCAGCTACCAATAGAACAGAAAACATTATAGCAGTTAGTCAGGTAACGCCAGCTTCTAGTTCTCAAGTATTTTTAA GTGGTATTAACAACGATATTCTTAATGAATACCAATATTATGAATTAATGAATAAGTTAGTTACTCAAGTAAATTCAAAT AACTTAGCTGAAGCAACTAGAACTTTGCAGCAAATGAATCAATTAGCTGAACAGACTAGAAGAATTGAACTAATGGAAAC TACAAGAAGGCTTCAGCAAAGTATTGAAACAACGAGAAGATTAGGTAATGTTGAACAGACTAAGAAGATTATTACCAGTG AGGCAACGAAGAAGTTAAGATCGTAA
Upstream 100 bases:
>100_bases TTATTTCAACCAGTTAAAGGAAAACAAAAAATTAGTCCTAATACAATAATAAAACTTGGAAATCAGACTATTGTTAAAGT TTTGGCTGAATAAAAGTTGG
Downstream 100 bases:
>100_bases GTAAAAAATAGAAGGAGTAAAGTTTCAGAATAATTATTATATAAAAGTTTTTTAACCAATAGATAATAATTTATCTGGAA GCAAATATGCCAGTTGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MIFLTISARLEFSHKYSFTSPVRGVFRLILVPERVSVATGFHYIILLDTSGSMAGIKIETAKQGALQLLNKIPPGNKITF ITFSSTVNTLIEFADTSGSVGETISSVTAQGNTVLYTALSTAIQIAKKHGIPGYIILLTDGNPTDLTNTDAYEKLQFPDG FKVISFGIGDDYNEQLLKVLADKTGGILNHIQDPMEIANSLPQAAVTQVGAKNVIVEINSPSQVKLLNYSGPPVKLGAIE GVVRIFGETSIPPNFNGNILDVKITYEDPATNRTENIIAVSQVTPASSSQVFLSGINNDILNEYQYYELMNKLVTQVNSN NLAEATRTLQQMNQLAEQTRRIELMETTRRLQQSIETTRRLGNVEQTKKIITSEATKKLRS
Sequences:
>Translated_381_residues MIFLTISARLEFSHKYSFTSPVRGVFRLILVPERVSVATGFHYIILLDTSGSMAGIKIETAKQGALQLLNKIPPGNKITF ITFSSTVNTLIEFADTSGSVGETISSVTAQGNTVLYTALSTAIQIAKKHGIPGYIILLTDGNPTDLTNTDAYEKLQFPDG FKVISFGIGDDYNEQLLKVLADKTGGILNHIQDPMEIANSLPQAAVTQVGAKNVIVEINSPSQVKLLNYSGPPVKLGAIE GVVRIFGETSIPPNFNGNILDVKITYEDPATNRTENIIAVSQVTPASSSQVFLSGINNDILNEYQYYELMNKLVTQVNSN NLAEATRTLQQMNQLAEQTRRIELMETTRRLQQSIETTRRLGNVEQTKKIITSEATKKLRS >Mature_381_residues MIFLTISARLEFSHKYSFTSPVRGVFRLILVPERVSVATGFHYIILLDTSGSMAGIKIETAKQGALQLLNKIPPGNKITF ITFSSTVNTLIEFADTSGSVGETISSVTAQGNTVLYTALSTAIQIAKKHGIPGYIILLTDGNPTDLTNTDAYEKLQFPDG FKVISFGIGDDYNEQLLKVLADKTGGILNHIQDPMEIANSLPQAAVTQVGAKNVIVEINSPSQVKLLNYSGPPVKLGAIE GVVRIFGETSIPPNFNGNILDVKITYEDPATNRTENIIAVSQVTPASSSQVFLSGINNDILNEYQYYELMNKLVTQVNSN NLAEATRTLQQMNQLAEQTRRIELMETTRRLQQSIETTRRLGNVEQTKKIITSEATKKLRS
Specific function: Unknown
COG id: COG2304
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 41744; Mature: 41744
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFLTISARLEFSHKYSFTSPVRGVFRLILVPERVSVATGFHYIILLDTSGSMAGIKIET CEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHEEECCEEEEEEEECCCCEEEEEEEC AKQGALQLLNKIPPGNKITFITFSSTVNTLIEFADTSGSVGETISSVTAQGNTVLYTALS CHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEHHHH TAIQIAKKHGIPGYIILLTDGNPTDLTNTDAYEKLQFPDGFKVISFGIGDDYNEQLLKVL HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCHHHHHHHHH ADKTGGILNHIQDPMEIANSLPQAAVTQVGAKNVIVEINSPSQVKLLNYSGPPVKLGAIE HHHCCHHHHHCCCHHHHHHCCCHHHHHHCCCCEEEEEECCCCEEEEEECCCCCEEEHHHH GVVRIFGETSIPPNFNGNILDVKITYEDPATNRTENIIAVSQVTPASSSQVFLSGINNDI HHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEECCCHHH LNEYQYYELMNKLVTQVNSNNLAEATRTLQQMNQLAEQTRRIELMETTRRLQQSIETTRR HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGNVEQTKKIITSEATKKLRS HCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIFLTISARLEFSHKYSFTSPVRGVFRLILVPERVSVATGFHYIILLDTSGSMAGIKIET CEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHEEECCEEEEEEEECCCCEEEEEEEC AKQGALQLLNKIPPGNKITFITFSSTVNTLIEFADTSGSVGETISSVTAQGNTVLYTALS CHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEHHHH TAIQIAKKHGIPGYIILLTDGNPTDLTNTDAYEKLQFPDGFKVISFGIGDDYNEQLLKVL HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCHHHHHHHHH ADKTGGILNHIQDPMEIANSLPQAAVTQVGAKNVIVEINSPSQVKLLNYSGPPVKLGAIE HHHCCHHHHHCCCHHHHHHCCCHHHHHHCCCCEEEEEECCCCEEEEEECCCCCEEEHHHH GVVRIFGETSIPPNFNGNILDVKITYEDPATNRTENIIAVSQVTPASSSQVFLSGINNDI HHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEECCCHHH LNEYQYYELMNKLVTQVNSNNLAEATRTLQQMNQLAEQTRRIELMETTRRLQQSIETTRR HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGNVEQTKKIITSEATKKLRS HCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]