Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

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The map label for this gene is yfbK [C]

Identifier: 15921064

GI number: 15921064

Start: 807260

End: 808405

Strand: Direct

Name: yfbK [C]

Synonym: ST0830

Alternate gene names: 15921064

Gene position: 807260-808405 (Clockwise)

Preceding gene: 15921063

Following gene: 15921065

Centisome position: 29.96

GC content: 33.07

Gene sequence:

>1146_bases
GTGATTTTTTTGACAATCTCAGCTAGGCTAGAGTTTAGTCATAAGTACTCTTTTACCTCACCTGTTAGGGGAGTTTTTAG
ATTAATTTTAGTCCCAGAAAGAGTATCCGTTGCAACTGGATTTCATTATATAATTTTATTAGATACCTCTGGATCAATGG
CTGGAATTAAGATAGAGACGGCAAAACAAGGTGCATTACAGTTATTAAATAAAATTCCTCCAGGAAATAAAATTACATTT
ATTACATTTTCTTCTACAGTAAATACTTTGATTGAATTCGCAGATACCTCAGGGTCTGTAGGTGAGACAATTTCTAGTGT
AACAGCTCAAGGTAACACTGTATTATATACTGCTTTGTCAACTGCTATTCAAATAGCTAAAAAGCACGGAATACCAGGTT
ATATTATTTTACTAACAGACGGTAATCCAACAGATTTAACAAATACTGACGCATACGAAAAACTTCAATTCCCAGATGGG
TTTAAGGTAATTTCATTTGGTATTGGTGATGATTATAATGAGCAGTTACTTAAGGTTTTAGCGGATAAAACTGGCGGTAT
TCTTAATCATATTCAAGATCCAATGGAGATAGCGAATTCTTTACCTCAAGCCGCTGTGACTCAAGTAGGTGCTAAAAATG
TCATAGTAGAAATAAACTCACCATCACAAGTTAAGTTATTAAATTATTCTGGACCACCAGTTAAATTAGGAGCTATAGAA
GGAGTTGTTAGAATATTTGGTGAAACGTCTATTCCACCAAACTTTAATGGAAATATATTAGATGTAAAAATAACTTATGA
AGATCCAGCTACCAATAGAACAGAAAACATTATAGCAGTTAGTCAGGTAACGCCAGCTTCTAGTTCTCAAGTATTTTTAA
GTGGTATTAACAACGATATTCTTAATGAATACCAATATTATGAATTAATGAATAAGTTAGTTACTCAAGTAAATTCAAAT
AACTTAGCTGAAGCAACTAGAACTTTGCAGCAAATGAATCAATTAGCTGAACAGACTAGAAGAATTGAACTAATGGAAAC
TACAAGAAGGCTTCAGCAAAGTATTGAAACAACGAGAAGATTAGGTAATGTTGAACAGACTAAGAAGATTATTACCAGTG
AGGCAACGAAGAAGTTAAGATCGTAA

Upstream 100 bases:

>100_bases
TTATTTCAACCAGTTAAAGGAAAACAAAAAATTAGTCCTAATACAATAATAAAACTTGGAAATCAGACTATTGTTAAAGT
TTTGGCTGAATAAAAGTTGG

Downstream 100 bases:

>100_bases
GTAAAAAATAGAAGGAGTAAAGTTTCAGAATAATTATTATATAAAAGTTTTTTAACCAATAGATAATAATTTATCTGGAA
GCAAATATGCCAGTTGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MIFLTISARLEFSHKYSFTSPVRGVFRLILVPERVSVATGFHYIILLDTSGSMAGIKIETAKQGALQLLNKIPPGNKITF
ITFSSTVNTLIEFADTSGSVGETISSVTAQGNTVLYTALSTAIQIAKKHGIPGYIILLTDGNPTDLTNTDAYEKLQFPDG
FKVISFGIGDDYNEQLLKVLADKTGGILNHIQDPMEIANSLPQAAVTQVGAKNVIVEINSPSQVKLLNYSGPPVKLGAIE
GVVRIFGETSIPPNFNGNILDVKITYEDPATNRTENIIAVSQVTPASSSQVFLSGINNDILNEYQYYELMNKLVTQVNSN
NLAEATRTLQQMNQLAEQTRRIELMETTRRLQQSIETTRRLGNVEQTKKIITSEATKKLRS

Sequences:

>Translated_381_residues
MIFLTISARLEFSHKYSFTSPVRGVFRLILVPERVSVATGFHYIILLDTSGSMAGIKIETAKQGALQLLNKIPPGNKITF
ITFSSTVNTLIEFADTSGSVGETISSVTAQGNTVLYTALSTAIQIAKKHGIPGYIILLTDGNPTDLTNTDAYEKLQFPDG
FKVISFGIGDDYNEQLLKVLADKTGGILNHIQDPMEIANSLPQAAVTQVGAKNVIVEINSPSQVKLLNYSGPPVKLGAIE
GVVRIFGETSIPPNFNGNILDVKITYEDPATNRTENIIAVSQVTPASSSQVFLSGINNDILNEYQYYELMNKLVTQVNSN
NLAEATRTLQQMNQLAEQTRRIELMETTRRLQQSIETTRRLGNVEQTKKIITSEATKKLRS
>Mature_381_residues
MIFLTISARLEFSHKYSFTSPVRGVFRLILVPERVSVATGFHYIILLDTSGSMAGIKIETAKQGALQLLNKIPPGNKITF
ITFSSTVNTLIEFADTSGSVGETISSVTAQGNTVLYTALSTAIQIAKKHGIPGYIILLTDGNPTDLTNTDAYEKLQFPDG
FKVISFGIGDDYNEQLLKVLADKTGGILNHIQDPMEIANSLPQAAVTQVGAKNVIVEINSPSQVKLLNYSGPPVKLGAIE
GVVRIFGETSIPPNFNGNILDVKITYEDPATNRTENIIAVSQVTPASSSQVFLSGINNDILNEYQYYELMNKLVTQVNSN
NLAEATRTLQQMNQLAEQTRRIELMETTRRLQQSIETTRRLGNVEQTKKIITSEATKKLRS

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 41744; Mature: 41744

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFLTISARLEFSHKYSFTSPVRGVFRLILVPERVSVATGFHYIILLDTSGSMAGIKIET
CEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHEEECCEEEEEEEECCCCEEEEEEEC
AKQGALQLLNKIPPGNKITFITFSSTVNTLIEFADTSGSVGETISSVTAQGNTVLYTALS
CHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEHHHH
TAIQIAKKHGIPGYIILLTDGNPTDLTNTDAYEKLQFPDGFKVISFGIGDDYNEQLLKVL
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCHHHHHHHHH
ADKTGGILNHIQDPMEIANSLPQAAVTQVGAKNVIVEINSPSQVKLLNYSGPPVKLGAIE
HHHCCHHHHHCCCHHHHHHCCCHHHHHHCCCCEEEEEECCCCEEEEEECCCCCEEEHHHH
GVVRIFGETSIPPNFNGNILDVKITYEDPATNRTENIIAVSQVTPASSSQVFLSGINNDI
HHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEECCCHHH
LNEYQYYELMNKLVTQVNSNNLAEATRTLQQMNQLAEQTRRIELMETTRRLQQSIETTRR
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGNVEQTKKIITSEATKKLRS
HCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIFLTISARLEFSHKYSFTSPVRGVFRLILVPERVSVATGFHYIILLDTSGSMAGIKIET
CEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHEEECCEEEEEEEECCCCEEEEEEEC
AKQGALQLLNKIPPGNKITFITFSSTVNTLIEFADTSGSVGETISSVTAQGNTVLYTALS
CHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEHHHH
TAIQIAKKHGIPGYIILLTDGNPTDLTNTDAYEKLQFPDGFKVISFGIGDDYNEQLLKVL
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCHHHHHHHHH
ADKTGGILNHIQDPMEIANSLPQAAVTQVGAKNVIVEINSPSQVKLLNYSGPPVKLGAIE
HHHCCHHHHHCCCHHHHHHCCCHHHHHHCCCCEEEEEECCCCEEEEEECCCCCEEEHHHH
GVVRIFGETSIPPNFNGNILDVKITYEDPATNRTENIIAVSQVTPASSSQVFLSGINNDI
HHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEECCCHHH
LNEYQYYELMNKLVTQVNSNNLAEATRTLQQMNQLAEQTRRIELMETTRRLQQSIETTRR
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGNVEQTKKIITSEATKKLRS
HCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]