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The map label for this gene is atoD [C]

Identifier: 15921058

GI number: 15921058

Start: 802902

End: 803660

Strand: Reverse

Name: atoD [C]

Synonym: ST0823

Alternate gene names: 15921058

Gene position: 803660-802902 (Counterclockwise)

Preceding gene: 15921059

Following gene: 15921056

Centisome position: 29.82

GC content: 35.18

Gene sequence:

>759_bases
ATGAGTAAGCTAATAAGCCTAGAAGAGGGAATTAAACTGGTTAGAGAAGGAGAAACAATTACCATAAGCGGTATGTCATT
TCATAGGAATCCTATGGGATTTATATACGAATTAGTGAAAAGTGGTACTAAAAATTTAGGTTTCGTTGATAGAGAACCAG
GTTTCGGTCTTGAAATACTTCTTAAATATGGAGTAGTAAGGAGAGTTAGGGCCCCAATGGTTACTTTAGAATGGTTTGGA
ATACCCCCATATTTTAGAAGGAAAGTCGAACAAGGAGAGATTGAATATTTGGAAGATACTTGTGGAGCCTTTATAGCCGG
AATAAGAGCAGGAGCTTTTGGAGTCCCTTTTATGCCGGTTAAAGGAATAATAGGTTCGGATTTAGTAAAATTACATGAAA
AAGTTGGTAGTTGGAAAGTAATTGAAGACCCATTTACTAATGAGAAAATCGTCCTAGTTAAAGCAATAATTCCAGATGTT
GCCATAATTCATGTTCATAAAGCTGATGAAGAAGGAAATGCTGAGATTTTAGGCCCATTATATGAGGACGAATACAAGGC
TAAAGCTGCAAAGAAAGTAATAATAACTGCTGAAGAGATAGTACCTAAATCTTATTTTTATGGAAAAAGACCAACAATAA
ACGCTGAATATGTTACAGCAGTAATTCATTTACCTAGAGGTGCGGAACCAACAAGTATGTTTGGATTATATGATGTTGAT
TGGGAAAAGATAATTGAGGAATTACAGCCAATTGGTTAA

Upstream 100 bases:

>100_bases
TTTCAATCAAGTTTAATATTAAATTTGCAAGAGAGTTGGAAGGATTTTGGATAATTGAAGGCACAAAAAAGAATTAATAC
GAAAATAACTATATCAACTT

Downstream 100 bases:

>100_bases
GAGAGCGGAAAGGCTTTAACTCTATGAGAACTCATAATCCCTCTAAAGCAGACCTAAGATTATAGGGGTCAACTTTATTT
ATAAAATTCAAATCTTCTTG

Product: glutaconate CoA-transferase subunit A

Products: acetate; glutaconyl-1-CoA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSKLISLEEGIKLVREGETITISGMSFHRNPMGFIYELVKSGTKNLGFVDREPGFGLEILLKYGVVRRVRAPMVTLEWFG
IPPYFRRKVEQGEIEYLEDTCGAFIAGIRAGAFGVPFMPVKGIIGSDLVKLHEKVGSWKVIEDPFTNEKIVLVKAIIPDV
AIIHVHKADEEGNAEILGPLYEDEYKAKAAKKVIITAEEIVPKSYFYGKRPTINAEYVTAVIHLPRGAEPTSMFGLYDVD
WEKIIEELQPIG

Sequences:

>Translated_252_residues
MSKLISLEEGIKLVREGETITISGMSFHRNPMGFIYELVKSGTKNLGFVDREPGFGLEILLKYGVVRRVRAPMVTLEWFG
IPPYFRRKVEQGEIEYLEDTCGAFIAGIRAGAFGVPFMPVKGIIGSDLVKLHEKVGSWKVIEDPFTNEKIVLVKAIIPDV
AIIHVHKADEEGNAEILGPLYEDEYKAKAAKKVIITAEEIVPKSYFYGKRPTINAEYVTAVIHLPRGAEPTSMFGLYDVD
WEKIIEELQPIG
>Mature_251_residues
SKLISLEEGIKLVREGETITISGMSFHRNPMGFIYELVKSGTKNLGFVDREPGFGLEILLKYGVVRRVRAPMVTLEWFGI
PPYFRRKVEQGEIEYLEDTCGAFIAGIRAGAFGVPFMPVKGIIGSDLVKLHEKVGSWKVIEDPFTNEKIVLVKAIIPDVA
IIHVHKADEEGNAEILGPLYEDEYKAKAAKKVIITAEEIVPKSYFYGKRPTINAEYVTAVIHLPRGAEPTSMFGLYDVDW
EKIIEELQPIG

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG1788

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: 2.8.3.12

Molecular weight: Translated: 28212; Mature: 28081

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLISLEEGIKLVREGETITISGMSFHRNPMGFIYELVKSGTKNLGFVDREPGFGLEIL
CCCCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEECCCCCCHHHH
LKYGVVRRVRAPMVTLEWFGIPPYFRRKVEQGEIEYLEDTCGAFIAGIRAGAFGVPFMPV
HHHHHHHHHHCCEEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
KGIIGSDLVKLHEKVGSWKVIEDPFTNEKIVLVKAIIPDVAIIHVHKADEEGNAEILGPL
CCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCEEEEEEEECCCCCCCEEECCC
YEDEYKAKAAKKVIITAEEIVPKSYFYGKRPTINAEYVTAVIHLPRGAEPTSMFGLYDVD
HHHHHHHHHHHEEEEEHHHHCCCHHCCCCCCCCCHHEEEEEEECCCCCCCCCCCEEEECC
WEKIIEELQPIG
HHHHHHHHCCCC
>Mature Secondary Structure 
SKLISLEEGIKLVREGETITISGMSFHRNPMGFIYELVKSGTKNLGFVDREPGFGLEIL
CCCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEECCCCCCHHHH
LKYGVVRRVRAPMVTLEWFGIPPYFRRKVEQGEIEYLEDTCGAFIAGIRAGAFGVPFMPV
HHHHHHHHHHCCEEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
KGIIGSDLVKLHEKVGSWKVIEDPFTNEKIVLVKAIIPDVAIIHVHKADEEGNAEILGPL
CCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCEEEEEEEECCCCCCCEEECCC
YEDEYKAKAAKKVIITAEEIVPKSYFYGKRPTINAEYVTAVIHLPRGAEPTSMFGLYDVD
HHHHHHHHHHHEEEEEHHHHCCCHHCCCCCCCCCHHEEEEEEECCCCCCCCCCCEEEECC
WEKIIEELQPIG
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: acetyl-CoA; (E)-glutaconate

Specific reaction: acetyl-CoA + (E)-glutaconate = acetate + glutaconyl-1-CoA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]