| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15921049
Identifier: 15921049
GI number: 15921049
Start: 791299
End: 793125
Strand: Reverse
Name: 15921049
Synonym: ST0814
Alternate gene names: NA
Gene position: 793125-791299 (Counterclockwise)
Preceding gene: 15921050
Following gene: 15921048
Centisome position: 29.43
GC content: 32.62
Gene sequence:
>1827_bases ATGATTGACCCCGAGGAATGTGAGTACCACGAATGGATACTACCTTTTAAAACTGGAGGGTACGCATCATCTACAATTTG CGGGATAAATAGTAGAACTTATCACGGATTTCTAATAGTCCCATTAAATCAGCCTCATAAGAGGTATTTAGTTCTTTCGA AATTTGAGGACTTTATAACAATTGATAATGAGGAATATCCTATAAATACTAATAGATACTTTGACGTATATTACCCAGAC GGATATAAGTATTTGGAAAACTTTAAGTGGGAGAAAAATTACGTTAAATGGGTTTACGAATATGGTAAAGTTACCCTTGA AAAAGTTCTTATAGCCCATGAGTATGAGAATGCTGTTACAATAAAATATAAAGCTGATAAAGGAGAATTAAAGATTTGCC CATTAATAACATTTAGAAGTCATCATTTAGTCACGGAAAAAGGAATGTACTTTGATTCAGTTATAGAGGGAAACAAAATA GAGATATTAAAGGATAATATTCCAATATTACATTTTTACATGGAGTCAACTAAGACTAGAATAGAACTAACAGGTTATTG GTACTATAATTTCTTTTATAGACTTGATTATGAAAGAGGTTCTAACTATAAGGAAGATTTATTTAATCCTTTCTGTATTT ATACTGGTAATGAAGCTACGATTACTGTATATTATGATAAATCTACAAATGTAAATATTGAAAATTCCCCAAGTGATTTA TTAAGAGTCTTATCAATATCATCAACGGACTTTGTAGTAAAGGGAAAGACTGGATGGAGTATAATTGCTGGCTATCATTG GTTTGACGAATGGGGTAGAGATACTTTCATTTCAATGGAGGGCTTACTTTTACTTAATAGATTATTTAATCAGGCTAAAG ATATTATTTTACGTTATTTAGACTATGAGAGTAAGGGACTTTTACCTAATCATATTACGGCTAATGGAGAACCTATTTAC GTTGGTGTTGATGTAAGCTTATGGGCTATAAATTCCATTTATTCATACTATCTATATAGTAAGGATAAGGAATTTATTAG AAAAATATATCCCAAATTACAAGATATTGTTGAAAATTACGCAAAAGGGAATGGAGTAGTATACATTAAAGAGGGTTTAC TATTTCATCGCGGAGCACCGAGAACCTGGATGGATGCATCTTATGATAGTCATGTTGTCACTCCTAGAGAAGGTGCAGCT GTTGAAATAAACGCTTTATGGTATAATGCATTGATGATTATGGATTTCTTTGCTAATATTGTAGATGATAAGAATAGTAT GTATAAAGAGCTAGCTGAGAAGACAAAGGCTAGCTTCAATGAAAAGTTCATCTCTAGTTGGGGTGCGTATGATTATTTAG ATCCATATTTAATTCCAGATAAATCAATAAGACCTAATCAGCTATTTGCCTTATCTTTGCCATTCAGTATAATGAGTGAG GACATAGGAAAAATTATGTTAATAACTATAGAGAATGAGCTATTGAGACCTTTTGGGTTAAGTACCTTATCCAGAAGAGA TCCAAAATATAAGCCCACATATAGAGGAGATAGGAAGAGCCGGGATGAAGCTTATCATAATGGCCCTATATGGCCATGGT TAATTGGTGCATACGTAGATGCTAAATTAAAAATTGAAAGTGATGTAATTAAGAATAAGCTCATTTTAGATGTAATTAAA CCTTTGTTGGAGTATGCAAAAAAGAACAGAGGATTCATTCCAGAATTATATGAGGATGTTCCTCCATATTTGCCAGCTGG GTGTATTGCACAAGCATGGAGTGTTGCTGAAGTATATAGGGCAATAAATAAGCTTCTCTCTCTTTAA
Upstream 100 bases:
>100_bases ATTTTACATCTACTTCTGTCGTTCCTCTAGTGTGGTCTCATGCAGAATTTATAATTACAGTAGATAAGTTAATATCCAGA TAAGTAGAAATGAATACCTA
Downstream 100 bases:
>100_bases AGAACAAGCATTTCTAAAGATTTATATTGTTTAAATACACTTTAGAAATGATGTTAGTAAAAACCCTCATGATTACAAAT CCCCCTACAATTTCTGTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: Amylo-Alpha-16-Glucosidase; Glycogen Debranching Protein; Glycogen Debranching -Related Protein; Glycogen Debranching ; 4-Alpha-Glucanotransferase; Amylo-Alpha-1 6-Glucosidase; Glyen Debranching; Amylo-Alpha-1 6-Glucosidase Family; Glycogen Debranching Archaeal Type; Glycogen Debranching Isoform 1 Related Protein; Amylo-1 6-Glucosidase; AmylO-Alpha-16-Glucosidase; Glycogen Debranching Family Protein; Glycogen Debranching /Alpha-Amylase
Number of amino acids: Translated: 608; Mature: 608
Protein sequence:
>608_residues MIDPEECEYHEWILPFKTGGYASSTICGINSRTYHGFLIVPLNQPHKRYLVLSKFEDFITIDNEEYPINTNRYFDVYYPD GYKYLENFKWEKNYVKWVYEYGKVTLEKVLIAHEYENAVTIKYKADKGELKICPLITFRSHHLVTEKGMYFDSVIEGNKI EILKDNIPILHFYMESTKTRIELTGYWYYNFFYRLDYERGSNYKEDLFNPFCIYTGNEATITVYYDKSTNVNIENSPSDL LRVLSISSTDFVVKGKTGWSIIAGYHWFDEWGRDTFISMEGLLLLNRLFNQAKDIILRYLDYESKGLLPNHITANGEPIY VGVDVSLWAINSIYSYYLYSKDKEFIRKIYPKLQDIVENYAKGNGVVYIKEGLLFHRGAPRTWMDASYDSHVVTPREGAA VEINALWYNALMIMDFFANIVDDKNSMYKELAEKTKASFNEKFISSWGAYDYLDPYLIPDKSIRPNQLFALSLPFSIMSE DIGKIMLITIENELLRPFGLSTLSRRDPKYKPTYRGDRKSRDEAYHNGPIWPWLIGAYVDAKLKIESDVIKNKLILDVIK PLLEYAKKNRGFIPELYEDVPPYLPAGCIAQAWSVAEVYRAINKLLSL
Sequences:
>Translated_608_residues MIDPEECEYHEWILPFKTGGYASSTICGINSRTYHGFLIVPLNQPHKRYLVLSKFEDFITIDNEEYPINTNRYFDVYYPD GYKYLENFKWEKNYVKWVYEYGKVTLEKVLIAHEYENAVTIKYKADKGELKICPLITFRSHHLVTEKGMYFDSVIEGNKI EILKDNIPILHFYMESTKTRIELTGYWYYNFFYRLDYERGSNYKEDLFNPFCIYTGNEATITVYYDKSTNVNIENSPSDL LRVLSISSTDFVVKGKTGWSIIAGYHWFDEWGRDTFISMEGLLLLNRLFNQAKDIILRYLDYESKGLLPNHITANGEPIY VGVDVSLWAINSIYSYYLYSKDKEFIRKIYPKLQDIVENYAKGNGVVYIKEGLLFHRGAPRTWMDASYDSHVVTPREGAA VEINALWYNALMIMDFFANIVDDKNSMYKELAEKTKASFNEKFISSWGAYDYLDPYLIPDKSIRPNQLFALSLPFSIMSE DIGKIMLITIENELLRPFGLSTLSRRDPKYKPTYRGDRKSRDEAYHNGPIWPWLIGAYVDAKLKIESDVIKNKLILDVIK PLLEYAKKNRGFIPELYEDVPPYLPAGCIAQAWSVAEVYRAINKLLSL >Mature_608_residues MIDPEECEYHEWILPFKTGGYASSTICGINSRTYHGFLIVPLNQPHKRYLVLSKFEDFITIDNEEYPINTNRYFDVYYPD GYKYLENFKWEKNYVKWVYEYGKVTLEKVLIAHEYENAVTIKYKADKGELKICPLITFRSHHLVTEKGMYFDSVIEGNKI EILKDNIPILHFYMESTKTRIELTGYWYYNFFYRLDYERGSNYKEDLFNPFCIYTGNEATITVYYDKSTNVNIENSPSDL LRVLSISSTDFVVKGKTGWSIIAGYHWFDEWGRDTFISMEGLLLLNRLFNQAKDIILRYLDYESKGLLPNHITANGEPIY VGVDVSLWAINSIYSYYLYSKDKEFIRKIYPKLQDIVENYAKGNGVVYIKEGLLFHRGAPRTWMDASYDSHVVTPREGAA VEINALWYNALMIMDFFANIVDDKNSMYKELAEKTKASFNEKFISSWGAYDYLDPYLIPDKSIRPNQLFALSLPFSIMSE DIGKIMLITIENELLRPFGLSTLSRRDPKYKPTYRGDRKSRDEAYHNGPIWPWLIGAYVDAKLKIESDVIKNKLILDVIK PLLEYAKKNRGFIPELYEDVPPYLPAGCIAQAWSVAEVYRAINKLLSL
Specific function: Unknown
COG id: COG3408
COG function: function code G; Glycogen debranching enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI281363924, Length=432, Percent_Identity=24.3055555555556, Blast_Score=86, Evalue=1e-16, Organism=Drosophila melanogaster, GI24656935, Length=432, Percent_Identity=24.3055555555556, Blast_Score=86, Evalue=1e-16, Organism=Drosophila melanogaster, GI281363922, Length=432, Percent_Identity=24.3055555555556, Blast_Score=86, Evalue=1e-16, Organism=Drosophila melanogaster, GI28573598, Length=432, Percent_Identity=24.3055555555556, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI45551136, Length=432, Percent_Identity=24.3055555555556, Blast_Score=85, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71055; Mature: 71055
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDPEECEYHEWILPFKTGGYASSTICGINSRTYHGFLIVPLNQPHKRYLVLSKFEDFIT CCCCCCCCCCEEEEEEECCCCCCCEEEECCCCEEEEEEEEECCCCCCEEEEEEECCCEEE IDNEEYPINTNRYFDVYYPDGYKYLENFKWEKNYVKWVYEYGKVTLEKVLIAHEYENAVT ECCCCCCCCCCCEEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHEEEHHHHEEECCCEEE IKYKADKGELKICPLITFRSHHLVTEKGMYFDSVIEGNKIEILKDNIPILHFYMESTKTR EEEECCCCCEEEEEEEEECCCEEEECCCCEEHHHCCCCEEEEEECCCCEEEEEECCCCEE IELTGYWYYNFFYRLDYERGSNYKEDLFNPFCIYTGNEATITVYYDKSTNVNIENSPSDL EEEEEEEEEEEEEEEECCCCCCCHHHCCCCEEEEECCCEEEEEEECCCCCEEECCCHHHH LRVLSISSTDFVVKGKTGWSIIAGYHWFDEWGRDTFISMEGLLLLNRLFNQAKDIILRYL HHHHCCCCCCEEEECCCCCEEEEEEHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH DYESKGLLPNHITANGEPIYVGVDVSLWAINSIYSYYLYSKDKEFIRKIYPKLQDIVENY CCCCCCCCCCCEECCCCEEEEEECEEEHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHH AKGNGVVYIKEGLLFHRGAPRTWMDASYDSHVVTPREGAAVEINALWYNALMIMDFFANI HCCCCEEEEECCEEEECCCCCCCCCCCCCCEEECCCCCCEEEEEHHHHHHHHHHHHHHHH VDDKNSMYKELAEKTKASFNEKFISSWGAYDYLDPYLIPDKSIRPNQLFALSLPFSIMSE HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEECCHHHHHH DIGKIMLITIENELLRPFGLSTLSRRDPKYKPTYRGDRKSRDEAYHNGPIWPWLIGAYVD CCCEEEEEEECCHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEE AKLKIESDVIKNKLILDVIKPLLEYAKKNRGFIPELYEDVPPYLPAGCIAQAWSVAEVYR EEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHH AINKLLSL HHHHHHCC >Mature Secondary Structure MIDPEECEYHEWILPFKTGGYASSTICGINSRTYHGFLIVPLNQPHKRYLVLSKFEDFIT CCCCCCCCCCEEEEEEECCCCCCCEEEECCCCEEEEEEEEECCCCCCEEEEEEECCCEEE IDNEEYPINTNRYFDVYYPDGYKYLENFKWEKNYVKWVYEYGKVTLEKVLIAHEYENAVT ECCCCCCCCCCCEEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHEEEHHHHEEECCCEEE IKYKADKGELKICPLITFRSHHLVTEKGMYFDSVIEGNKIEILKDNIPILHFYMESTKTR EEEECCCCCEEEEEEEEECCCEEEECCCCEEHHHCCCCEEEEEECCCCEEEEEECCCCEE IELTGYWYYNFFYRLDYERGSNYKEDLFNPFCIYTGNEATITVYYDKSTNVNIENSPSDL EEEEEEEEEEEEEEEECCCCCCCHHHCCCCEEEEECCCEEEEEEECCCCCEEECCCHHHH LRVLSISSTDFVVKGKTGWSIIAGYHWFDEWGRDTFISMEGLLLLNRLFNQAKDIILRYL HHHHCCCCCCEEEECCCCCEEEEEEHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH DYESKGLLPNHITANGEPIYVGVDVSLWAINSIYSYYLYSKDKEFIRKIYPKLQDIVENY CCCCCCCCCCCEECCCCEEEEEECEEEHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHH AKGNGVVYIKEGLLFHRGAPRTWMDASYDSHVVTPREGAAVEINALWYNALMIMDFFANI HCCCCEEEEECCEEEECCCCCCCCCCCCCCEEECCCCCCEEEEEHHHHHHHHHHHHHHHH VDDKNSMYKELAEKTKASFNEKFISSWGAYDYLDPYLIPDKSIRPNQLFALSLPFSIMSE HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEECCHHHHHH DIGKIMLITIENELLRPFGLSTLSRRDPKYKPTYRGDRKSRDEAYHNGPIWPWLIGAYVD CCCEEEEEEECCHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEE AKLKIESDVIKNKLILDVIKPLLEYAKKNRGFIPELYEDVPPYLPAGCIAQAWSVAEVYR EEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHH AINKLLSL HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA