| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15920996
Identifier: 15920996
GI number: 15920996
Start: 742227
End: 743828
Strand: Direct
Name: 15920996
Synonym: ST0762
Alternate gene names: NA
Gene position: 742227-743828 (Clockwise)
Preceding gene: 15920995
Following gene: 15920997
Centisome position: 27.54
GC content: 34.21
Gene sequence:
>1602_bases GTGTTAAGTGTAAAACAAATGGAAAGTGTCGGTATAGTGCTACAAAGAGGTGAAAATAATAGCGTTTATGCTCTCCTTAA ACCTAACATTGATATAATAGGCGGGCAACTTTTCCTTATTGAGGATGAAGGTAAAAAGACTGTAGCTAGGTTAGATGATT ATTTCTACATAAATGAGTTCTTCGATGAAAAAACACCTTTCTCGAGGACATTGTTAAACGATAAAATTGATGTTGAACTA TTAAATATGAATACAGTAATCAGGGCGGAATTATCAATAGTTAAGAGGTATAATCACTCCACGATACCAAAACCTGGGTC TATAGTGAAGTTTCTCCCAGAGATTGCAGATGAGAAGGACTTACTTTCTTTTTATCAACTTTCTTCATCTCAAGGTTACA TTAAGTATGGAAGATTAGCTGGTTCTAAAATTCCTTTACTTCTTGACCTTAATGCGATAACTATGCATGTCGGAATATTT GGAGAAACTGGAAGTGGGAAGAGTTATAATATGAGATACTTAATCACTCTTCTTTCAAATATTGAAATTGACGGTAAAAT TACATCAATTCCTTTAATTATATTTGATGCTAATGGTGATTACTCGGATTTTACATCTTTTAACATAGATCTAGTCAGTA AGGGAAGAGGATGGATAAAGAAATATGTAATGAGAGATCCATTGAGTGATTATGAGATAAAATTATCAATTGACCTCTCT CTATTCACAGCTAAGGATTTAGCTGACTTTATAATTTCTCTAAAATATGGTGATATTGCCCCAAATTCATTGCAAGCTAA CATACTGGAGCAAGTCTTGTCTCAACATGATCCGCAGGAATATAATTGGTTATTAAGTACTAGAGAGGGCATTGAAAGTT TAAAAATAGAGTTACAAGAGCTTAAAAATACAGGTTTCAGTCCGAGTAGCATTAGAGCTGTAGTTAGTTCTTTAGAAATT TTCCTTAACAAAGTGAGAAAATACAATTTCGTATCTTCATCTTCTTCATTTAATGAGCAAACCCTTGATGTTATTTGGAA TACTAAAGGATTAGCTATAATTGACTTTTCATCTGATGGTGCACCAGGTGTTGATATATCAACTAAACAGCTAATTGTAA GTTATGTTTCTCGTTTAGTCTTAGATTATCTTACCAAGGCTAAATATTCTGGAAAACAAAAACTTATAGGAGTAGTGATT GAGGAAGCACAGAATTATATACCTTCAAATGATTATCCAGTAAATGCTAGGATTACGAAAGAGGTTTTAGTTACATTAGC TACACAAGGAAGGAAATTTGGTGCCTCTCTCTTTTTAGTTTCACAGAGGCCGGCGTTCGTTGATAAGTATGTACTTTCAA TGCTAAACACTTTCTTCTTTCACAGGATTTATCATGAAGACGTAAAATACGTAATGTCGGCCACTGGTGGGCTTCCAGAA CATCTAGCTAAGAGCTTACCCTCTCTTGAAACTGGATATGTTATAGTTTCCGGTTTGATGTCAGCGTTAAAATCGCCAGC TTTAGTTAAGATACCATGGGATGACAGAATAGGTTCTTACACAGGTTACGTCATGAGTATTGAAAATATCTTGGTGAGTT AA
Upstream 100 bases:
>100_bases TTCAAACGAGGACTATTCACGGGTCTTATATGAAAAATACTCATATGAGAAATACACGAGGAAATACCGAATATTCGACA AAAGTTGTCTTAAGGATGGA
Downstream 100 bases:
>100_bases GATGTGTGAGTTTAGATTAAGTGAAACATCGGCTTCATCAGAAAGTATTTATAAGCTTTATGAATGCGTTATGAATAAGA CTGAGATAGTAAATAAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MLSVKQMESVGIVLQRGENNSVYALLKPNIDIIGGQLFLIEDEGKKTVARLDDYFYINEFFDEKTPFSRTLLNDKIDVEL LNMNTVIRAELSIVKRYNHSTIPKPGSIVKFLPEIADEKDLLSFYQLSSSQGYIKYGRLAGSKIPLLLDLNAITMHVGIF GETGSGKSYNMRYLITLLSNIEIDGKITSIPLIIFDANGDYSDFTSFNIDLVSKGRGWIKKYVMRDPLSDYEIKLSIDLS LFTAKDLADFIISLKYGDIAPNSLQANILEQVLSQHDPQEYNWLLSTREGIESLKIELQELKNTGFSPSSIRAVVSSLEI FLNKVRKYNFVSSSSSFNEQTLDVIWNTKGLAIIDFSSDGAPGVDISTKQLIVSYVSRLVLDYLTKAKYSGKQKLIGVVI EEAQNYIPSNDYPVNARITKEVLVTLATQGRKFGASLFLVSQRPAFVDKYVLSMLNTFFFHRIYHEDVKYVMSATGGLPE HLAKSLPSLETGYVIVSGLMSALKSPALVKIPWDDRIGSYTGYVMSIENILVS
Sequences:
>Translated_533_residues MLSVKQMESVGIVLQRGENNSVYALLKPNIDIIGGQLFLIEDEGKKTVARLDDYFYINEFFDEKTPFSRTLLNDKIDVEL LNMNTVIRAELSIVKRYNHSTIPKPGSIVKFLPEIADEKDLLSFYQLSSSQGYIKYGRLAGSKIPLLLDLNAITMHVGIF GETGSGKSYNMRYLITLLSNIEIDGKITSIPLIIFDANGDYSDFTSFNIDLVSKGRGWIKKYVMRDPLSDYEIKLSIDLS LFTAKDLADFIISLKYGDIAPNSLQANILEQVLSQHDPQEYNWLLSTREGIESLKIELQELKNTGFSPSSIRAVVSSLEI FLNKVRKYNFVSSSSSFNEQTLDVIWNTKGLAIIDFSSDGAPGVDISTKQLIVSYVSRLVLDYLTKAKYSGKQKLIGVVI EEAQNYIPSNDYPVNARITKEVLVTLATQGRKFGASLFLVSQRPAFVDKYVLSMLNTFFFHRIYHEDVKYVMSATGGLPE HLAKSLPSLETGYVIVSGLMSALKSPALVKIPWDDRIGSYTGYVMSIENILVS >Mature_533_residues MLSVKQMESVGIVLQRGENNSVYALLKPNIDIIGGQLFLIEDEGKKTVARLDDYFYINEFFDEKTPFSRTLLNDKIDVEL LNMNTVIRAELSIVKRYNHSTIPKPGSIVKFLPEIADEKDLLSFYQLSSSQGYIKYGRLAGSKIPLLLDLNAITMHVGIF GETGSGKSYNMRYLITLLSNIEIDGKITSIPLIIFDANGDYSDFTSFNIDLVSKGRGWIKKYVMRDPLSDYEIKLSIDLS LFTAKDLADFIISLKYGDIAPNSLQANILEQVLSQHDPQEYNWLLSTREGIESLKIELQELKNTGFSPSSIRAVVSSLEI FLNKVRKYNFVSSSSSFNEQTLDVIWNTKGLAIIDFSSDGAPGVDISTKQLIVSYVSRLVLDYLTKAKYSGKQKLIGVVI EEAQNYIPSNDYPVNARITKEVLVTLATQGRKFGASLFLVSQRPAFVDKYVLSMLNTFFFHRIYHEDVKYVMSATGGLPE HLAKSLPSLETGYVIVSGLMSALKSPALVKIPWDDRIGSYTGYVMSIENILVS
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJECL08 and MJ1429 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 - InterPro: IPR002789 - InterPro: IPR018538 [H]
Pfam domain/function: PF05872 DUF853; PF01935 DUF87; PF09378 HAS-barrel [H]
EC number: NA
Molecular weight: Translated: 59733; Mature: 59733
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSVKQMESVGIVLQRGENNSVYALLKPNIDIIGGQLFLIEDEGKKTVARLDDYFYINEF CCCHHHHHCCCEEEEECCCCCEEEEECCCCEEECCEEEEEECCCCHHHHHHHHHEEHHHH FDEKTPFSRTLLNDKIDVELLNMNTVIRAELSIVKRYNHSTIPKPGSIVKFLPEIADEKD HCCCCCHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHH LLSFYQLSSSQGYIKYGRLAGSKIPLLLDLNAITMHVGIFGETGSGKSYNMRYLITLLSN HHHHHHHCCCCCEEEEECCCCCCCCEEEECCEEEEEEEEEEECCCCCCCCHHHHEEHHHC IEIDGKITSIPLIIFDANGDYSDFTSFNIDLVSKGRGWIKKYVMRDPLSDYEIKLSIDLS CEECCEEEEEEEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCEEEEEEEEE LFTAKDLADFIISLKYGDIAPNSLQANILEQVLSQHDPQEYNWLLSTREGIESLKIELQE EEEHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LKNTGFSPSSIRAVVSSLEIFLNKVRKYNFVSSSSSFNEQTLDVIWNTKGLAIIDFSSDG HHCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCEEEEEECCCCEEEEEECCCC APGVDISTKQLIVSYVSRLVLDYLTKAKYSGKQKLIGVVIEEAQNYIPSNDYPVNARITK CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHH EVLVTLATQGRKFGASLFLVSQRPAFVDKYVLSMLNTFFFHRIYHEDVKYVMSATGGLPE HHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH HLAKSLPSLETGYVIVSGLMSALKSPALVKIPWDDRIGSYTGYVMSIENILVS HHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHEEEHHHHHCC >Mature Secondary Structure MLSVKQMESVGIVLQRGENNSVYALLKPNIDIIGGQLFLIEDEGKKTVARLDDYFYINEF CCCHHHHHCCCEEEEECCCCCEEEEECCCCEEECCEEEEEECCCCHHHHHHHHHEEHHHH FDEKTPFSRTLLNDKIDVELLNMNTVIRAELSIVKRYNHSTIPKPGSIVKFLPEIADEKD HCCCCCHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHH LLSFYQLSSSQGYIKYGRLAGSKIPLLLDLNAITMHVGIFGETGSGKSYNMRYLITLLSN HHHHHHHCCCCCEEEEECCCCCCCCEEEECCEEEEEEEEEEECCCCCCCCHHHHEEHHHC IEIDGKITSIPLIIFDANGDYSDFTSFNIDLVSKGRGWIKKYVMRDPLSDYEIKLSIDLS CEECCEEEEEEEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCEEEEEEEEE LFTAKDLADFIISLKYGDIAPNSLQANILEQVLSQHDPQEYNWLLSTREGIESLKIELQE EEEHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LKNTGFSPSSIRAVVSSLEIFLNKVRKYNFVSSSSSFNEQTLDVIWNTKGLAIIDFSSDG HHCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCEEEEEECCCCEEEEEECCCC APGVDISTKQLIVSYVSRLVLDYLTKAKYSGKQKLIGVVIEEAQNYIPSNDYPVNARITK CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHH EVLVTLATQGRKFGASLFLVSQRPAFVDKYVLSMLNTFFFHRIYHEDVKYVMSATGGLPE HHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH HLAKSLPSLETGYVIVSGLMSALKSPALVKIPWDDRIGSYTGYVMSIENILVS HHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]