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The map label for this gene is yodF [H]

Identifier: 15920990

GI number: 15920990

Start: 737502

End: 739034

Strand: Reverse

Name: yodF [H]

Synonym: ST0759

Alternate gene names: 15920990

Gene position: 739034-737502 (Counterclockwise)

Preceding gene: 15920991

Following gene: 15920988

Centisome position: 27.42

GC content: 36.4

Gene sequence:

>1533_bases
ATGAACGTAGATATCTCGACCTTAACAATATTTATAGTATTATTTGCTATATTTGCCTTTTTAGGATTTTATGGGGCTAG
ATGGAGAAGAGGGGACTTAAGCAGACTTGATGAATGGGGACTTGGAGGAAGGAGATTAGGAATATTACTAGTCTGGTTCT
TAATGGGAGCTGACCTATATACAGCATATACTTTCATAGCAGTACCAGAATTAGCTTTTAAGAGTGGTGCATTAGCATAT
TTTGCTGTATTTTATGTAGGTTTAACTTTTCCAATTGCTCTTTTAACCATGCCTAGATTGTGGACTGTATCAAGAAACAG
AGGCTATGTTACAGCAGCTGATTTCATTAAAGATAGGTTTGGCAGTAGAGCTTTAGCAATAGCTGTAGCCTTAGTAGGTG
CAGTTGCTGAAATACCTTATATTGCTTTACAAATATTTGGTATGCAGGCTGTATTAATAGTAATGCTTATTGGTTTAGGT
CTTCCACCAACAAGGTTAACTCTTGATTTATCGCTTTTAATAGCATTTATTGTCCTAGCCGCTTTTACAATTACTAGCGG
ATTAAGAGGTGCCGCATTAACTGGTGTATTTAAAGATATATTAGTATGGATAACAGTTTTAGCAACAATAATTGCAGTTC
CACTTAGTATTGGAGGTTTTTCAACGGCATTTCATGCAGTTAAACCTATACCCTATTCTTACTTACCACCATCAGCCCTT
TCAGCATTTTGGACACTTGCAGTAGGAAGTGCACTAGCGTTATATCTCTATCCTCATGCAATTAATGGTTCATTAAGTGC
AGAAGATAAAAAGAAGCTAAAATACGGTACAGCATTATTACCTATTTATGGTGTTGGTCTAGCACTGCTGGCATTATTTG
GTATACTAGTCTTCGCTATCAAGCCAGCCTACACATTATCAGCTAAGTATGGAGGAATAACAGCTGTACCGGCTTTGTTA
GCTTATTCTATGCCTTCATGGTTTAATGGTATAGCATTCTTAGGTATATTTATTGGAGGATTAGTACCAGCAGCCATAAT
GGCTATCGGTTCTGCAAATCTTTTGGTTAGAAATGTAGTTAAAGAATTTTACAACTTAACTCCTAAAGGAGAAGCTACTT
TAGCTAAGTGGATTTCAACTGCTTTTAAGTTCCTTGCCTTAGCTTTCATCTTTGTTGTACCACTAAGTTATGCTATTGGG
TTACAATTACTCGGAGGTATTATAATTTTACAAACGTTACCACCAGTCTTCTTAGGATTATTTACAAATAAGCTCGAAGG
AAGATCATTATTAGCGGGTCTAATAGGCGGTGTGGCTAGTGGTGTAGTGCTGACTGCGTATGTTAATCATTTTGGTGCAA
TTGCAACTACAAGCTATCCAACACCCTTAGGAGGAATATATATTGCATTAATAGCTCTAGCAATTAACTTAGTAATTTCA
CTCGTGGGTACAGCAATTGCTATGGCTATGGGATGGAAACCAAAAGAAGTTATAAAAACAGAGGAATTAGTTAAAACAAT
TGAAGAGAAATAA

Upstream 100 bases:

>100_bases
GTGGTTTACCAATATTTTACTGGTATCAGATACTTCTACTGGCTGTAACTACAATACTAAGTGCTGTAGTAGTTCATTTT
GTAAAGGAGGAGGGTGAAAG

Downstream 100 bases:

>100_bases
TACTACAAGTTATTTTTTATTATTTTTTATCTCCAGATAAAAGGTGTTTTGTTCCCCATTTTTCCATTTCAGTAAATAAT
GTTTTTAGCTCTTTCCCTTT

Product: hypothetical protein

Products: Na (I) [Cytoplasm]; pantothenate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MNVDISTLTIFIVLFAIFAFLGFYGARWRRGDLSRLDEWGLGGRRLGILLVWFLMGADLYTAYTFIAVPELAFKSGALAY
FAVFYVGLTFPIALLTMPRLWTVSRNRGYVTAADFIKDRFGSRALAIAVALVGAVAEIPYIALQIFGMQAVLIVMLIGLG
LPPTRLTLDLSLLIAFIVLAAFTITSGLRGAALTGVFKDILVWITVLATIIAVPLSIGGFSTAFHAVKPIPYSYLPPSAL
SAFWTLAVGSALALYLYPHAINGSLSAEDKKKLKYGTALLPIYGVGLALLALFGILVFAIKPAYTLSAKYGGITAVPALL
AYSMPSWFNGIAFLGIFIGGLVPAAIMAIGSANLLVRNVVKEFYNLTPKGEATLAKWISTAFKFLALAFIFVVPLSYAIG
LQLLGGIIILQTLPPVFLGLFTNKLEGRSLLAGLIGGVASGVVLTAYVNHFGAIATTSYPTPLGGIYIALIALAINLVIS
LVGTAIAMAMGWKPKEVIKTEELVKTIEEK

Sequences:

>Translated_510_residues
MNVDISTLTIFIVLFAIFAFLGFYGARWRRGDLSRLDEWGLGGRRLGILLVWFLMGADLYTAYTFIAVPELAFKSGALAY
FAVFYVGLTFPIALLTMPRLWTVSRNRGYVTAADFIKDRFGSRALAIAVALVGAVAEIPYIALQIFGMQAVLIVMLIGLG
LPPTRLTLDLSLLIAFIVLAAFTITSGLRGAALTGVFKDILVWITVLATIIAVPLSIGGFSTAFHAVKPIPYSYLPPSAL
SAFWTLAVGSALALYLYPHAINGSLSAEDKKKLKYGTALLPIYGVGLALLALFGILVFAIKPAYTLSAKYGGITAVPALL
AYSMPSWFNGIAFLGIFIGGLVPAAIMAIGSANLLVRNVVKEFYNLTPKGEATLAKWISTAFKFLALAFIFVVPLSYAIG
LQLLGGIIILQTLPPVFLGLFTNKLEGRSLLAGLIGGVASGVVLTAYVNHFGAIATTSYPTPLGGIYIALIALAINLVIS
LVGTAIAMAMGWKPKEVIKTEELVKTIEEK
>Mature_510_residues
MNVDISTLTIFIVLFAIFAFLGFYGARWRRGDLSRLDEWGLGGRRLGILLVWFLMGADLYTAYTFIAVPELAFKSGALAY
FAVFYVGLTFPIALLTMPRLWTVSRNRGYVTAADFIKDRFGSRALAIAVALVGAVAEIPYIALQIFGMQAVLIVMLIGLG
LPPTRLTLDLSLLIAFIVLAAFTITSGLRGAALTGVFKDILVWITVLATIIAVPLSIGGFSTAFHAVKPIPYSYLPPSAL
SAFWTLAVGSALALYLYPHAINGSLSAEDKKKLKYGTALLPIYGVGLALLALFGILVFAIKPAYTLSAKYGGITAVPALL
AYSMPSWFNGIAFLGIFIGGLVPAAIMAIGSANLLVRNVVKEFYNLTPKGEATLAKWISTAFKFLALAFIFVVPLSYAIG
LQLLGGIIILQTLPPVFLGLFTNKLEGRSLLAGLIGGVASGVVLTAYVNHFGAIATTSYPTPLGGIYIALIALAINLVIS
LVGTAIAMAMGWKPKEVIKTEELVKTIEEK

Specific function: Catalyzes The Sodium-Dependent Uptake Of Extracellular Pantothenate. [C]

COG id: COG0591

COG function: function code ER; Na+/proline symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 54452; Mature: 54452

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; pantothenate [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + pantothenate [Periplasm] = Na (I) [Cytoplasm] + pantothenate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]