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The map label for this gene is sdx [H]

Identifier: 15920948

GI number: 15920948

Start: 702977

End: 703321

Strand: Reverse

Name: sdx [H]

Synonym: ST0718

Alternate gene names: 15920948

Gene position: 703321-702977 (Counterclockwise)

Preceding gene: 15920949

Following gene: 15920944

Centisome position: 26.1

GC content: 36.23

Gene sequence:

>345_bases
ATGTTTTATTTTCTTATGGTATGGAAAAGGACTATTTCGGCAAAGGCGCTGGAAAAAGCAAAGAGTGCTGCAGTTAAGGT
AGATGATAAAGTAATTTTTATCGCAAATGTTAATGGTAATTTATACGCAATGGATGCTGTATGTTCACACGCTAGGTGTA
TTTTAGGTAAATTAGATGAGGAGAAGCTAACAGTTAGATGTTACTGCCATCTAGCATTATTTGATCTAAGGACTGGGCAA
ATGCTAGAACCTCCCTATGTAGCACCAGACGCACCAAAAGAGAAACTAGGATTAAAAACATATCAAATTAGGGATAATAA
TGGCTGGATAGAAGTAGATGTATGA

Upstream 100 bases:

>100_bases
ATGTAAATGCAAGTCCTTTATTATTTTGAGATTTTAAAAAATATAGATACATTAATGTTAAATTAAATACCTTTGCTAAA
TAAAAGATATATGGTTTGAG

Downstream 100 bases:

>100_bases
AATATTTTTTGCTACTAAGAAAACACTGCAAGCGAATTAAGTAGTTTTTATTTTTGTTATCTTCCTTATGAGATCGTAAA
GAAGATAATAATGATTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Pink FeS protein [H]

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MFYFLMVWKRTISAKALEKAKSAAVKVDDKVIFIANVNGNLYAMDAVCSHARCILGKLDEEKLTVRCYCHLALFDLRTGQ
MLEPPYVAPDAPKEKLGLKTYQIRDNNGWIEVDV

Sequences:

>Translated_114_residues
MFYFLMVWKRTISAKALEKAKSAAVKVDDKVIFIANVNGNLYAMDAVCSHARCILGKLDEEKLTVRCYCHLALFDLRTGQ
MLEPPYVAPDAPKEKLGLKTYQIRDNNGWIEVDV
>Mature_114_residues
MFYFLMVWKRTISAKALEKAKSAAVKVDDKVIFIANVNGNLYAMDAVCSHARCILGKLDEEKLTVRCYCHLALFDLRTGQ
MLEPPYVAPDAPKEKLGLKTYQIRDNNGWIEVDV

Specific function: Not yet known [H]

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 12940; Mature: 12940

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYFLMVWKRTISAKALEKAKSAAVKVDDKVIFIANVNGNLYAMDAVCSHARCILGKLDE
CEEEEEEEHHHHHHHHHHHHHHCEEEECCCEEEEEECCCCEEEEHHHHHHHHEEECCCCC
EKLTVRCYCHLALFDLRTGQMLEPPYVAPDAPKEKLGLKTYQIRDNNGWIEVDV
CCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCEEEEEECCCCEEEEEC
>Mature Secondary Structure
MFYFLMVWKRTISAKALEKAKSAAVKVDDKVIFIANVNGNLYAMDAVCSHARCILGKLDE
CEEEEEEEHHHHHHHHHHHHHHCEEEECCCEEEEEECCCCEEEEHHHHHHHHEEECCCCC
EKLTVRCYCHLALFDLRTGQMLEPPYVAPDAPKEKLGLKTYQIRDNNGWIEVDV
CCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCEEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479; 7730295; 8910356 [H]