| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is yyaJ [H]
Identifier: 15920943
GI number: 15920943
Start: 697724
End: 699160
Strand: Direct
Name: yyaJ [H]
Synonym: ST0713
Alternate gene names: 15920943
Gene position: 697724-699160 (Clockwise)
Preceding gene: 15920941
Following gene: 15920945
Centisome position: 25.89
GC content: 38.62
Gene sequence:
>1437_bases ATGTCTAAGGAAGAGGAGACTAAGTCATCGGAAATTATAGCCAGATTAGATAGGCTTCCAACATGGGCTTTCAACTATAT CCTTCTAGGCATAATAGGTGTGGGAGAGTTATTCACTTTCTATGACATATTTAACATAAACGTTAGTTTCGTCCAAACAG CAGTAACACTATTTCATGTATCCCCAGCTCAAGCAGCTCAGCTATTAGGACCAGTAGTCTTAGGTAATTTAGTAGGTTAT GTTGTAGGATCCCTTGTCCTTTCACCAATAGCTGACAGAATCGGTAGGAGAGATATGTTAATGATAACCATGTTAATCAT GGGATTAAGTTCGCTTTATAACGCTTTCGCACCGAATTATATTAACTTTTTTATAGCTAGGACGTTAACTGGAATTGGTG TTGGTGCTGATTTAGCTATAGTGAATACTTATATTAGTGAGGTTGCCCCACTCGCTTATAGAAGTAAGTACGTTTCAGCA ATTTTCATATTCTCTACAGTAGGAGGTTTTCTGGCAATTTGGTTAGGTTTGCTCTTTACTACACCACCTGCACCGTTTCC GCAAGGATTGCCTATTGCATTAGGTGGCTCAGGATTTTTCGCAATAAACGGTTGGAGGGTAATGTATATTATTGGTGCAG TCTTAGCATTAATAGGCTTAGCCTTAAGATTTAGGCTACCAGAATCTCCCAGATGGTTAATAAGTAAAGGTAGAGTTTCA GAAGCTGAAATGATAGTCAACCTTATGGAAGAGAAAGTGACTTCCCGAGGATATAAGCTACCACCACTACCCTCTTTAAT ACCAATATATAAAGCTTCAAAGCCAGTACCATATTCAGAAATCTTTACAAACTCAACATATTTAAAGAGGTTTATAACTC TGGTTATAGTGTGGTTCTTAGCATATACTACCGTTTACAGTATTGCGGCAGGCTTGACTTCGCTCCTGACAGCACAAGGA TACAGCACTTCTGAAGCCGGAATGATATCTGCAATTGGAATTATAGGATTTATATTAGCTGCTGTAATTGCAACACTCTT CGGAGATAGATTAGAAAGAAAATGGTGGATAGGAATAGGTGCTTTAGTAACAGTAATTGGAGGTATGATGGTTGCATTAA CACCAAACCCAATAATCGATGGACTTGGTGCAATTATACTATTCATAGGATTTAATGTTTGGGTTCCAGTAGCCTATACA TGGACTGCTGAAAGTTTTCCAACAAGAGCTAGAACTTCTGGATTTGCATTATGTGATGGATTTGGGCATTTAGGAGGAGG ATTAGGAGTAGTCTACATCACCTCTGTGGCTACTACACTACACTCAACAGTAGAGCTGTTTGGCTTAATTGCTGGATTCT TAGTAGTGGCAGCAATAATTGCTATGGTAACTGGGCATTATACTTTAGGAAAAAGATTGGACGAAATTTCACCTTAA
Upstream 100 bases:
>100_bases AGATTAAATTATATCGATAGTTTTTTAAACTTAGCAAGTTACATTATCTATTAAATTAGTTTAATATAGCCTTTATAAGG CAATTAAGGAATTTACGCAT
Downstream 100 bases:
>100_bases AAAATTTTTTCTTTAAGAAGGAATTTTTTTAGCTAAAATCTTTTTTAAGAGCTTAGTACTTGTTACTCTAAAATATAAAG TATAGTGATAACCAGCGTAA
Product: transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MSKEEETKSSEIIARLDRLPTWAFNYILLGIIGVGELFTFYDIFNINVSFVQTAVTLFHVSPAQAAQLLGPVVLGNLVGY VVGSLVLSPIADRIGRRDMLMITMLIMGLSSLYNAFAPNYINFFIARTLTGIGVGADLAIVNTYISEVAPLAYRSKYVSA IFIFSTVGGFLAIWLGLLFTTPPAPFPQGLPIALGGSGFFAINGWRVMYIIGAVLALIGLALRFRLPESPRWLISKGRVS EAEMIVNLMEEKVTSRGYKLPPLPSLIPIYKASKPVPYSEIFTNSTYLKRFITLVIVWFLAYTTVYSIAAGLTSLLTAQG YSTSEAGMISAIGIIGFILAAVIATLFGDRLERKWWIGIGALVTVIGGMMVALTPNPIIDGLGAIILFIGFNVWVPVAYT WTAESFPTRARTSGFALCDGFGHLGGGLGVVYITSVATTLHSTVELFGLIAGFLVVAAIIAMVTGHYTLGKRLDEISP
Sequences:
>Translated_478_residues MSKEEETKSSEIIARLDRLPTWAFNYILLGIIGVGELFTFYDIFNINVSFVQTAVTLFHVSPAQAAQLLGPVVLGNLVGY VVGSLVLSPIADRIGRRDMLMITMLIMGLSSLYNAFAPNYINFFIARTLTGIGVGADLAIVNTYISEVAPLAYRSKYVSA IFIFSTVGGFLAIWLGLLFTTPPAPFPQGLPIALGGSGFFAINGWRVMYIIGAVLALIGLALRFRLPESPRWLISKGRVS EAEMIVNLMEEKVTSRGYKLPPLPSLIPIYKASKPVPYSEIFTNSTYLKRFITLVIVWFLAYTTVYSIAAGLTSLLTAQG YSTSEAGMISAIGIIGFILAAVIATLFGDRLERKWWIGIGALVTVIGGMMVALTPNPIIDGLGAIILFIGFNVWVPVAYT WTAESFPTRARTSGFALCDGFGHLGGGLGVVYITSVATTLHSTVELFGLIAGFLVVAAIIAMVTGHYTLGKRLDEISP >Mature_477_residues SKEEETKSSEIIARLDRLPTWAFNYILLGIIGVGELFTFYDIFNINVSFVQTAVTLFHVSPAQAAQLLGPVVLGNLVGYV VGSLVLSPIADRIGRRDMLMITMLIMGLSSLYNAFAPNYINFFIARTLTGIGVGADLAIVNTYISEVAPLAYRSKYVSAI FIFSTVGGFLAIWLGLLFTTPPAPFPQGLPIALGGSGFFAINGWRVMYIIGAVLALIGLALRFRLPESPRWLISKGRVSE AEMIVNLMEEKVTSRGYKLPPLPSLIPIYKASKPVPYSEIFTNSTYLKRFITLVIVWFLAYTTVYSIAAGLTSLLTAQGY STSEAGMISAIGIIGFILAAVIATLFGDRLERKWWIGIGALVTVIGGMMVALTPNPIIDGLGAIILFIGFNVWVPVAYTW TAESFPTRARTSGFALCDGFGHLGGGLGVVYITSVATTLHSTVELFGLIAGFLVVAAIIAMVTGHYTLGKRLDEISP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI216548223, Length=183, Percent_Identity=26.2295081967213, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI73695465, Length=199, Percent_Identity=29.6482412060301, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI7662270, Length=250, Percent_Identity=26, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI262399383, Length=175, Percent_Identity=29.1428571428571, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI166197673, Length=363, Percent_Identity=24.5179063360882, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI4506999, Length=355, Percent_Identity=25.0704225352113, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI4507005, Length=368, Percent_Identity=23.9130434782609, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI31542327, Length=388, Percent_Identity=24.2268041237113, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI21553331, Length=359, Percent_Identity=22.2841225626741, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1788074, Length=432, Percent_Identity=28.2407407407407, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI1788068, Length=479, Percent_Identity=24.0083507306889, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI87082159, Length=427, Percent_Identity=27.1662763466042, Blast_Score=92, Evalue=7e-20, Organism=Escherichia coli, GI1786229, Length=210, Percent_Identity=30.952380952381, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1790463, Length=207, Percent_Identity=29.951690821256, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1789207, Length=299, Percent_Identity=25.0836120401338, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1789312, Length=356, Percent_Identity=23.5955056179775, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193209133, Length=188, Percent_Identity=25.531914893617, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6320766, Length=488, Percent_Identity=23.3606557377049, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6321886, Length=373, Percent_Identity=24.3967828418231, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6322618, Length=466, Percent_Identity=22.5321888412017, Blast_Score=74, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6319956, Length=486, Percent_Identity=22.6337448559671, Blast_Score=74, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6324400, Length=488, Percent_Identity=23.155737704918, Blast_Score=73, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6323653, Length=371, Percent_Identity=26.4150943396226, Blast_Score=68, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6323512, Length=445, Percent_Identity=24.0449438202247, Blast_Score=66, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6320552, Length=365, Percent_Identity=23.8356164383562, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6319718, Length=166, Percent_Identity=30.1204819277108, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6321888, Length=365, Percent_Identity=24.6575342465753, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24640198, Length=226, Percent_Identity=25.2212389380531, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24640196, Length=226, Percent_Identity=25.2212389380531, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24640200, Length=226, Percent_Identity=25.2212389380531, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI221330907, Length=388, Percent_Identity=21.9072164948454, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 51601; Mature: 51469
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKEEETKSSEIIARLDRLPTWAFNYILLGIIGVGELFTFYDIFNINVSFVQTAVTLFHV CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC SPAQAAQLLGPVVLGNLVGYVVGSLVLSPIADRIGRRDMLMITMLIMGLSSLYNAFAPNY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHH INFFIARTLTGIGVGADLAIVNTYISEVAPLAYRSKYVSAIFIFSTVGGFLAIWLGLLFT HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPPAPFPQGLPIALGGSGFFAINGWRVMYIIGAVLALIGLALRFRLPESPRWLISKGRVS CCCCCCCCCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCH EAEMIVNLMEEKVTSRGYKLPPLPSLIPIYKASKPVPYSEIFTNSTYLKRFITLVIVWFL HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHH AYTTVYSIAAGLTSLLTAQGYSTSEAGMISAIGIIGFILAAVIATLFGDRLERKWWIGIG HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVTVIGGMMVALTPNPIIDGLGAIILFIGFNVWVPVAYTWTAESFPTRARTSGFALCDG HHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCEEECC FGHLGGGLGVVYITSVATTLHSTVELFGLIAGFLVVAAIIAMVTGHYTLGKRLDEISP CHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC >Mature Secondary Structure SKEEETKSSEIIARLDRLPTWAFNYILLGIIGVGELFTFYDIFNINVSFVQTAVTLFHV CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC SPAQAAQLLGPVVLGNLVGYVVGSLVLSPIADRIGRRDMLMITMLIMGLSSLYNAFAPNY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHH INFFIARTLTGIGVGADLAIVNTYISEVAPLAYRSKYVSAIFIFSTVGGFLAIWLGLLFT HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPPAPFPQGLPIALGGSGFFAINGWRVMYIIGAVLALIGLALRFRLPESPRWLISKGRVS CCCCCCCCCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCH EAEMIVNLMEEKVTSRGYKLPPLPSLIPIYKASKPVPYSEIFTNSTYLKRFITLVIVWFL HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHH AYTTVYSIAAGLTSLLTAQGYSTSEAGMISAIGIIGFILAAVIATLFGDRLERKWWIGIG HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVTVIGGMMVALTPNPIIDGLGAIILFIGFNVWVPVAYTWTAESFPTRARTSGFALCDG HHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCEEECC FGHLGGGLGVVYITSVATTLHSTVELFGLIAGFLVVAAIIAMVTGHYTLGKRLDEISP CHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584024; 8011666; 9384377 [H]