| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is insA1 [C]
Identifier: 15920893
GI number: 15920893
Start: 654300
End: 655097
Strand: Direct
Name: insA1 [C]
Synonym: ST0671
Alternate gene names: 15920893
Gene position: 654300-655097 (Clockwise)
Preceding gene: 15920892
Following gene: 15920896
Centisome position: 24.28
GC content: 42.61
Gene sequence:
>798_bases GTGTCGTCATTAGGGGATAGTGTCGTCATTAAGCTATTTATATTTGTATTACGAGTATTACTTATGGGTAGGAAGCCTGT ATTTAGGCAAGATTTAGCTTGTCCCTCTTGTGGTAGTCATCACGTCGTTAAGTGCGGTAAGCCTCTTGGTAGGCAGAGGT TTCTGTGTAGGGATTGCGGTAAGTACTTCCTTGCAGACGCAATTTATCACCACCACTCTAAGGAGGTGAGGGAGAAGGCT TTGAGGATGTATACTAATGGTATGAGTATGAGAGCTATTTCTAGGGTTCTTAACGTACCTCTGGGTACTGTTTTCACTTG GATTAAGCGTTATGGTAAGAGGAAATATGAGAAGCTAGTGGACTTGTGGAATAAGGCTAAAGAGCTGGTCAAGGGTAAGG TCGTTACTAAGGTTGTTGATGAGATGTGGACATACTTGTACAGAAACACTAGGGCTTTCTACAAGTGGGTATTCACTTGT TATGTGTACACTAGGCTAGGGTTATACATAATTTACTCTGTGGGTGATAGGGACGAGAATACTTTTCGTGAGGTCAAGGA CTACGTGCCAGATGATGGTAGGTGGGTGAGTGATGATTACAACGTTTACTTTTGGTTAAAAAACCACACGGTAGTCTCAC TTGTTAATCCCAACGAGGGGCTTCATTCCTCACTGAGGGATAGGCTTGTACGTTTCAAGAGGGCTACGAAGGCTGTTAAC AGGAGTATAAATATGGTGAAGTATTCTATAGCACTAGTCTTGTGGGAGAGAAGGCTAATCCCAGAATTTGTAGCTTAA
Upstream 100 bases:
>100_bases TTGATATTTTTAAAAAAAAACATAACTAAATTGCAAAGTTTTTATCTTAAAACAGTAAAATCTTATTCCTATCTTAAATA AATTGTTAGAGTTACACATA
Downstream 100 bases:
>100_bases TGACGACACTATCTCATTAGGGTATTTATATTTCTATATTTAAATTAAGATATACAAAACCTTATCTTAATATCTAGTCT TTATGAGATTTTCATTAATT
Product: insertion element protein
Products: NA
Alternate protein names: IS1 Transposase; Second ORF In Transposon ISC; Transposase ISC
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MSSLGDSVVIKLFIFVLRVLLMGRKPVFRQDLACPSCGSHHVVKCGKPLGRQRFLCRDCGKYFLADAIYHHHSKEVREKA LRMYTNGMSMRAISRVLNVPLGTVFTWIKRYGKRKYEKLVDLWNKAKELVKGKVVTKVVDEMWTYLYRNTRAFYKWVFTC YVYTRLGLYIIYSVGDRDENTFREVKDYVPDDGRWVSDDYNVYFWLKNHTVVSLVNPNEGLHSSLRDRLVRFKRATKAVN RSINMVKYSIALVLWERRLIPEFVA
Sequences:
>Translated_265_residues MSSLGDSVVIKLFIFVLRVLLMGRKPVFRQDLACPSCGSHHVVKCGKPLGRQRFLCRDCGKYFLADAIYHHHSKEVREKA LRMYTNGMSMRAISRVLNVPLGTVFTWIKRYGKRKYEKLVDLWNKAKELVKGKVVTKVVDEMWTYLYRNTRAFYKWVFTC YVYTRLGLYIIYSVGDRDENTFREVKDYVPDDGRWVSDDYNVYFWLKNHTVVSLVNPNEGLHSSLRDRLVRFKRATKAVN RSINMVKYSIALVLWERRLIPEFVA >Mature_264_residues SSLGDSVVIKLFIFVLRVLLMGRKPVFRQDLACPSCGSHHVVKCGKPLGRQRFLCRDCGKYFLADAIYHHHSKEVREKAL RMYTNGMSMRAISRVLNVPLGTVFTWIKRYGKRKYEKLVDLWNKAKELVKGKVVTKVVDEMWTYLYRNTRAFYKWVFTCY VYTRLGLYIIYSVGDRDENTFREVKDYVPDDGRWVSDDYNVYFWLKNHTVVSLVNPNEGLHSSLRDRLVRFKRATKAVNR SINMVKYSIALVLWERRLIPEFVA
Specific function: Absolutely required for transposition of is1 [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31259; Mature: 31128
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLGDSVVIKLFIFVLRVLLMGRKPVFRQDLACPSCGSHHVVKCGKPLGRQRFLCRDCG CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHH KYFLADAIYHHHSKEVREKALRMYTNGMSMRAISRVLNVPLGTVFTWIKRYGKRKYEKLV HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH DLWNKAKELVKGKVVTKVVDEMWTYLYRNTRAFYKWVFTCYVYTRLGLYIIYSVGDRDEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHH TFREVKDYVPDDGRWVSDDYNVYFWLKNHTVVSLVNPNEGLHSSLRDRLVRFKRATKAVN HHHHHHHCCCCCCCEECCCCEEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH RSINMVKYSIALVLWERRLIPEFVA HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSLGDSVVIKLFIFVLRVLLMGRKPVFRQDLACPSCGSHHVVKCGKPLGRQRFLCRDCG CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHH KYFLADAIYHHHSKEVREKALRMYTNGMSMRAISRVLNVPLGTVFTWIKRYGKRKYEKLV HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH DLWNKAKELVKGKVVTKVVDEMWTYLYRNTRAFYKWVFTCYVYTRLGLYIIYSVGDRDEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHH TFREVKDYVPDDGRWVSDDYNVYFWLKNHTVVSLVNPNEGLHSSLRDRLVRFKRATKAVN HHHHHHHCCCCCCCEECCCCEEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH RSINMVKYSIALVLWERRLIPEFVA HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA