| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is yhjX [C]
Identifier: 15920865
GI number: 15920865
Start: 629965
End: 631089
Strand: Reverse
Name: yhjX [C]
Synonym: ST0644
Alternate gene names: 15920865
Gene position: 631089-629965 (Counterclockwise)
Preceding gene: 15920869
Following gene: 15920864
Centisome position: 23.42
GC content: 35.82
Gene sequence:
>1125_bases ATGGGCAGAGGTAAGTACCTAGCTATAGGATTCGTTGTAATGTGCTTTAACTCCTTGTACCAATACTCATGGAATGCTCT TGAACCTCTGCTTAAAGAAGGATTTAACGTCAGCCTTGTTCAAATTGCTTTAGGATTCACATTATTTAGCATATTTTCCT CTGGGTTTCAACCAATTGGAGGACATTTTGCTGATAAAAGCGGACCTAGAAAAATTGGATTTATTTCAGCAATACTATCT GCTATTGGATTCCTAGGAACGTACTTTTCACCAAATATTTACTTCTTTTATTTAGCATGGTCATTGGGGAGCATAGGTGA GGGAATACTTTATGGAATAGCTGCAAATTTGGCAATGAAATGGTTTAGGGATAGAATGGGATTTGCCACTGGTATAGTAT CAATGGGCTTTGGTTTAGGGTCAGCTATTGCGAACCCTTTTATAGCCCTTGCTGGGAATTATCGTATAGTCACTTTAACA ATAGGTTTGACAGAAGTCATATTGTTACCACTACTCCTTTATTTCTCAGAGTATCCCCAAAATTTAGCTGGGCAAGCACC AAAGCAAGTTATCTTATCACTTAAATTCTGGTTGATATATATCTCATTCGTAGGCGCAGTTACACCCTTAACCGTTATGT CGTCAGAATTACCAGTGTTAGGTAAAAATTTACCACAAGAAGAACTAATTGCACTAATTTCAATATTACCTCTACTGAGC GGAGGTTTACGACCTTTATTTGGTTTTATTGCAGACAGATTAGGAATAGTAAAGACTACATTACTACTTAATGTTATCAT AACAATAGGTGCCAGTTTCCTTCTTCTTAATCAATTACCAGTATCAGTAGTTTTAATAGGATTTGCTGGTGGTTCAATGA TAACCTTATATTTTAACGTTGCCGGTGAGATTTTTGGAACTAGATTCTCTACAATAAATAGTGGAATCTTATATACTGGA AAAGCCTTAGGTGGGGCATTGGGAAGTGTTATATTTGCTATAATTTATCAACTAGGACTAATATATTCTGAAATTTATAC AGTAGTTCTCGGTTTAATAGGAGTTTTACCACTTCTAGCTGTGTTTATGATGTCAATAAGAAAAACTCCGCAGAAGAACA AATGA
Upstream 100 bases:
>100_bases GGGGCATATTTATTTTTTTAACTTCAATTATATAAATTTAAACTAGAGCAAGTAGAGTGTTAGTAATTAGGTTTATTACC TAAAATTCAACTATTTAAGT
Downstream 100 bases:
>100_bases TTTTGCTTCTTTAATTCACACTATGACCCTTTTCACTTTCATTTTGATGATTGAATTTTGGGAAAAGTTATTAATCGGCT GCCTATGGAAAAACGAAGTG
Product: oxalate:formate antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MGRGKYLAIGFVVMCFNSLYQYSWNALEPLLKEGFNVSLVQIALGFTLFSIFSSGFQPIGGHFADKSGPRKIGFISAILS AIGFLGTYFSPNIYFFYLAWSLGSIGEGILYGIAANLAMKWFRDRMGFATGIVSMGFGLGSAIANPFIALAGNYRIVTLT IGLTEVILLPLLLYFSEYPQNLAGQAPKQVILSLKFWLIYISFVGAVTPLTVMSSELPVLGKNLPQEELIALISILPLLS GGLRPLFGFIADRLGIVKTTLLLNVIITIGASFLLLNQLPVSVVLIGFAGGSMITLYFNVAGEIFGTRFSTINSGILYTG KALGGALGSVIFAIIYQLGLIYSEIYTVVLGLIGVLPLLAVFMMSIRKTPQKNK
Sequences:
>Translated_374_residues MGRGKYLAIGFVVMCFNSLYQYSWNALEPLLKEGFNVSLVQIALGFTLFSIFSSGFQPIGGHFADKSGPRKIGFISAILS AIGFLGTYFSPNIYFFYLAWSLGSIGEGILYGIAANLAMKWFRDRMGFATGIVSMGFGLGSAIANPFIALAGNYRIVTLT IGLTEVILLPLLLYFSEYPQNLAGQAPKQVILSLKFWLIYISFVGAVTPLTVMSSELPVLGKNLPQEELIALISILPLLS GGLRPLFGFIADRLGIVKTTLLLNVIITIGASFLLLNQLPVSVVLIGFAGGSMITLYFNVAGEIFGTRFSTINSGILYTG KALGGALGSVIFAIIYQLGLIYSEIYTVVLGLIGVLPLLAVFMMSIRKTPQKNK >Mature_373_residues GRGKYLAIGFVVMCFNSLYQYSWNALEPLLKEGFNVSLVQIALGFTLFSIFSSGFQPIGGHFADKSGPRKIGFISAILSA IGFLGTYFSPNIYFFYLAWSLGSIGEGILYGIAANLAMKWFRDRMGFATGIVSMGFGLGSAIANPFIALAGNYRIVTLTI GLTEVILLPLLLYFSEYPQNLAGQAPKQVILSLKFWLIYISFVGAVTPLTVMSSELPVLGKNLPQEELIALISILPLLSG GLRPLFGFIADRLGIVKTTLLLNVIITIGASFLLLNQLPVSVVLIGFAGGSMITLYFNVAGEIFGTRFSTINSGILYTGK ALGGALGSVIFAIIYQLGLIYSEIYTVVLGLIGVLPLLAVFMMSIRKTPQKNK
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789969, Length=365, Percent_Identity=24.6575342465753, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004741 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 40361; Mature: 40230
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRGKYLAIGFVVMCFNSLYQYSWNALEPLLKEGFNVSLVQIALGFTLFSIFSSGFQPIG CCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC GHFADKSGPRKIGFISAILSAIGFLGTYFSPNIYFFYLAWSLGSIGEGILYGIAANLAMK CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHH WFRDRMGFATGIVSMGFGLGSAIANPFIALAGNYRIVTLTIGLTEVILLPLLLYFSEYPQ HHHHHHHHHHHHHHHHCCHHHHHHCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHCCH NLAGQAPKQVILSLKFWLIYISFVGAVTPLTVMSSELPVLGKNLPQEELIALISILPLLS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHC GGLRPLFGFIADRLGIVKTTLLLNVIITIGASFLLLNQLPVSVVLIGFAGGSMITLYFNV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEH AGEIFGTRFSTINSGILYTGKALGGALGSVIFAIIYQLGLIYSEIYTVVLGLIGVLPLLA HHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFMMSIRKTPQKNK HHHHHHHCCCCCCC >Mature Secondary Structure GRGKYLAIGFVVMCFNSLYQYSWNALEPLLKEGFNVSLVQIALGFTLFSIFSSGFQPIG CCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC GHFADKSGPRKIGFISAILSAIGFLGTYFSPNIYFFYLAWSLGSIGEGILYGIAANLAMK CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHH WFRDRMGFATGIVSMGFGLGSAIANPFIALAGNYRIVTLTIGLTEVILLPLLLYFSEYPQ HHHHHHHHHHHHHHHHCCHHHHHHCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHCCH NLAGQAPKQVILSLKFWLIYISFVGAVTPLTVMSSELPVLGKNLPQEELIALISILPLLS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHC GGLRPLFGFIADRLGIVKTTLLLNVIITIGASFLLLNQLPVSVVLIGFAGGSMITLYFNV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEH AGEIFGTRFSTINSGILYTGKALGGALGSVIFAIIYQLGLIYSEIYTVVLGLIGVLPLLA HHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFMMSIRKTPQKNK HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2439991 [H]