Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

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The map label for this gene is 15920861

Identifier: 15920861

GI number: 15920861

Start: 625484

End: 626992

Strand: Reverse

Name: 15920861

Synonym: ST0640

Alternate gene names: NA

Gene position: 626992-625484 (Counterclockwise)

Preceding gene: 15920863

Following gene: 15920857

Centisome position: 23.27

GC content: 32.87

Gene sequence:

>1509_bases
ATGAGATTTATTGTAACACCAAGAAATAGATATATTGAAGTTGAAGGAGAAGGTAGAGAAGGGATAATAACTTTTCCTAC
ATGGGTTCCTGGCTCATATTTTATAAGGGAACAAGAAAGAAACGTGATATTTTATGATTATGGCTATCAAATTTCTAAAA
ATAAATTTTGGATAAATGGAAAATTCAAATACATTTATTACGCGAACTCAAAGGATCAAAGAGAGGTTATTTCACTGTCA
GATTATCTTTTCATAAATCCGGTGTCCTTATTCCCATTTCAAGATCTAAATGAAAAGTATTGTGTAAAAATTAATGTTAA
GTGGCCTATTCATACTACTTTAAGAAAAGAAGGTGAATGGTATTGTGGAGATAACTATGACGAATTCGCTGACTCACCTA
TCCAAGCATCACCACATCTAAAACTGATTGAGATTGACGAAAAGCACTCAATTTCAACTATAGATGATTTCACAGAAGTA
GAAAAGCTTAGAAATGTTATACGTGTGATAGATTCTTATCTCCCAGATTCTTTGCCAAATTATATTTTCTTCTTTAGAAG
AAGTGATAAAAACCTAGGGGGAATAGAGCATAAAGATTCTTCTGCAATAGTTACTACTTGGGATAGAAAAGATCTTTTAT
GGTTATTTGCTCATGAGTACTTTCACAGATGGAATATAAAGAGAATTAAACCGAAGGATTTAAAGATCGACTACGAACAT
GAAAATTATACTGAGCTACTCTGGGTTGCTGAAGGTTTAACTGACTACATGGCATTCTTATCTCTAATAGAAAGTGGAGT
TATAAATGCAAATGATGCACTGAAAGCTGTCGCAAATATTCTTCAAAATCTCACTTTCCTAGGATTTAAGAGAATGAGTA
TTGCAGAATCATCTAAGTTAACTTGGATTAAACTCTATAAAAGAGACGAAAATTATCCTAATATTGGCATTTCCTATTAC
GATGCAGGATTTATTTTAGGACTTTTAATGGACTTCGCTATAAGGGAGAATAATGAGTGTAAAAAGAGCATAGTAGATTT
TTTCAGAGAGCTGTATAAGGTAGGGGAATATACTTACGCTGATGTAAAAGAAATTGCTGAGAGCTTAGGGTTTAAAAACC
TAGATGAATTAGTATACAAGAGGAATCCGCCAATTTTAGAATATCTAGGCCGTTATATGAAAATAATATTTACCGATAAA
GATAAACCCTACTATGGTATAAGGGTTGAGAATAACGTTATTACGTTTATTGAAGATAATTCTCCAGCTGACTTAGCTGG
ATTAAATATAGGAGACGAAATAATAGCCGTGGACGGAATTAAAAAGCAAATAGAAGTTAAGGAAGAAGTTCTTCTTACTA
TATCTAGAGAGGGAAGATTAAAGGAGATTAAGCTAAGGGCTGGGAATAACCCTGGACATAGGATACGGCTTATTGGAGAA
GGAAAATTGTTTAAATGTATTTTTGGGGAAGAAAAAGCAGAAGGGGAAAGTGAACAAAAAATAGTTTAG

Upstream 100 bases:

>100_bases
TATTTTTACTGTGGATTAGTAGGAATGTCCAAAAGTGTGGCTTCGCAATATCTGCTATGGATAAAACATTAAAGCTTCTA
AGATTGTCAGAATATGTCAT

Downstream 100 bases:

>100_bases
TTTATTTCTTTCCAGATTTTTCTAACATTTGTAGTAATTCTTTTGGTGCATCTTTTTCGCTTACAGCGCCTCTACCAGTC
TTACCGTTGTCGTCATATGT

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; Pdz/Dhr/Glgf; M61 Glycyl Aminopeptidase; Metallopeptidase; M61 Family Glycyl Aminopeptidase; Aminopeptidase N Family Protein; PDZ Domain-Containing Protein; Trypsin-Like Serine Protease; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; Signaling Protein; M61 Glycyl Aminopeptidase Protein; PDZ Domain Protein; M61 Glycyl Aminopeptidase Family Protein

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MRFIVTPRNRYIEVEGEGREGIITFPTWVPGSYFIREQERNVIFYDYGYQISKNKFWINGKFKYIYYANSKDQREVISLS
DYLFINPVSLFPFQDLNEKYCVKINVKWPIHTTLRKEGEWYCGDNYDEFADSPIQASPHLKLIEIDEKHSISTIDDFTEV
EKLRNVIRVIDSYLPDSLPNYIFFFRRSDKNLGGIEHKDSSAIVTTWDRKDLLWLFAHEYFHRWNIKRIKPKDLKIDYEH
ENYTELLWVAEGLTDYMAFLSLIESGVINANDALKAVANILQNLTFLGFKRMSIAESSKLTWIKLYKRDENYPNIGISYY
DAGFILGLLMDFAIRENNECKKSIVDFFRELYKVGEYTYADVKEIAESLGFKNLDELVYKRNPPILEYLGRYMKIIFTDK
DKPYYGIRVENNVITFIEDNSPADLAGLNIGDEIIAVDGIKKQIEVKEEVLLTISREGRLKEIKLRAGNNPGHRIRLIGE
GKLFKCIFGEEKAEGESEQKIV

Sequences:

>Translated_502_residues
MRFIVTPRNRYIEVEGEGREGIITFPTWVPGSYFIREQERNVIFYDYGYQISKNKFWINGKFKYIYYANSKDQREVISLS
DYLFINPVSLFPFQDLNEKYCVKINVKWPIHTTLRKEGEWYCGDNYDEFADSPIQASPHLKLIEIDEKHSISTIDDFTEV
EKLRNVIRVIDSYLPDSLPNYIFFFRRSDKNLGGIEHKDSSAIVTTWDRKDLLWLFAHEYFHRWNIKRIKPKDLKIDYEH
ENYTELLWVAEGLTDYMAFLSLIESGVINANDALKAVANILQNLTFLGFKRMSIAESSKLTWIKLYKRDENYPNIGISYY
DAGFILGLLMDFAIRENNECKKSIVDFFRELYKVGEYTYADVKEIAESLGFKNLDELVYKRNPPILEYLGRYMKIIFTDK
DKPYYGIRVENNVITFIEDNSPADLAGLNIGDEIIAVDGIKKQIEVKEEVLLTISREGRLKEIKLRAGNNPGHRIRLIGE
GKLFKCIFGEEKAEGESEQKIV
>Mature_502_residues
MRFIVTPRNRYIEVEGEGREGIITFPTWVPGSYFIREQERNVIFYDYGYQISKNKFWINGKFKYIYYANSKDQREVISLS
DYLFINPVSLFPFQDLNEKYCVKINVKWPIHTTLRKEGEWYCGDNYDEFADSPIQASPHLKLIEIDEKHSISTIDDFTEV
EKLRNVIRVIDSYLPDSLPNYIFFFRRSDKNLGGIEHKDSSAIVTTWDRKDLLWLFAHEYFHRWNIKRIKPKDLKIDYEH
ENYTELLWVAEGLTDYMAFLSLIESGVINANDALKAVANILQNLTFLGFKRMSIAESSKLTWIKLYKRDENYPNIGISYY
DAGFILGLLMDFAIRENNECKKSIVDFFRELYKVGEYTYADVKEIAESLGFKNLDELVYKRNPPILEYLGRYMKIIFTDK
DKPYYGIRVENNVITFIEDNSPADLAGLNIGDEIIAVDGIKKQIEVKEEVLLTISREGRLKEIKLRAGNNPGHRIRLIGE
GKLFKCIFGEEKAEGESEQKIV

Specific function: Unknown

COG id: COG3975

COG function: function code R; Predicted protease with the C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58840; Mature: 58840

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS50106 PDZ ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFIVTPRNRYIEVEGEGREGIITFPTWVPGSYFIREQERNVIFYDYGYQISKNKFWING
CEEEECCCCCEEEEECCCCCCEEECCCCCCCCEEEEECCCCEEEEECCEEEECCEEEEEE
KFKYIYYANSKDQREVISLSDYLFINPVSLFPFQDLNEKYCVKINVKWPIHTTLRKEGEW
EEEEEEEECCCCCHHHEEECCEEEEECEEECCCCCCCCEEEEEEEEECCCHHHHHCCCCE
YCGDNYDEFADSPIQASPHLKLIEIDEKHSISTIDDFTEVEKLRNVIRVIDSYLPDSLPN
EECCCHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YIFFFRRSDKNLGGIEHKDSSAIVTTWDRKDLLWLFAHEYFHRWNIKRIKPKDLKIDYEH
EEEEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEECCCCCEEEECC
ENYTELLWVAEGLTDYMAFLSLIESGVINANDALKAVANILQNLTFLGFKRMSIAESSKL
CCCEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCE
TWIKLYKRDENYPNIGISYYDAGFILGLLMDFAIRENNECKKSIVDFFRELYKVGEYTYA
EEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHH
DVKEIAESLGFKNLDELVYKRNPPILEYLGRYMKIIFTDKDKPYYGIRVENNVITFIEDN
HHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHEEEEEEECCCCCEEEEEEECCEEEEEECC
SPADLAGLNIGDEIIAVDGIKKQIEVKEEVLLTISREGRLKEIKLRAGNNPGHRIRLIGE
CCCCEECCCCCCCEEEECCCHHHHHCCEEEEEEEECCCCEEEEEEECCCCCCCEEEEEEC
GKLFKCIFGEEKAEGESEQKIV
CCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRFIVTPRNRYIEVEGEGREGIITFPTWVPGSYFIREQERNVIFYDYGYQISKNKFWING
CEEEECCCCCEEEEECCCCCCEEECCCCCCCCEEEEECCCCEEEEECCEEEECCEEEEEE
KFKYIYYANSKDQREVISLSDYLFINPVSLFPFQDLNEKYCVKINVKWPIHTTLRKEGEW
EEEEEEEECCCCCHHHEEECCEEEEECEEECCCCCCCCEEEEEEEEECCCHHHHHCCCCE
YCGDNYDEFADSPIQASPHLKLIEIDEKHSISTIDDFTEVEKLRNVIRVIDSYLPDSLPN
EECCCHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YIFFFRRSDKNLGGIEHKDSSAIVTTWDRKDLLWLFAHEYFHRWNIKRIKPKDLKIDYEH
EEEEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEECCCCCEEEECC
ENYTELLWVAEGLTDYMAFLSLIESGVINANDALKAVANILQNLTFLGFKRMSIAESSKL
CCCEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCE
TWIKLYKRDENYPNIGISYYDAGFILGLLMDFAIRENNECKKSIVDFFRELYKVGEYTYA
EEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHH
DVKEIAESLGFKNLDELVYKRNPPILEYLGRYMKIIFTDKDKPYYGIRVENNVITFIEDN
HHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHEEEEEEECCCCCEEEEEEECCEEEEEECC
SPADLAGLNIGDEIIAVDGIKKQIEVKEEVLLTISREGRLKEIKLRAGNNPGHRIRLIGE
CCCCEECCCCCCCEEEECCCHHHHHCCEEEEEEEECCCCEEEEEEECCCCCCCEEEEEEC
GKLFKCIFGEEKAEGESEQKIV
CCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA