Click here to switch to the map view.

The map label for this gene is 15920797

Identifier: 15920797

GI number: 15920797

Start: 567765

End: 568238

Strand: Direct

Name: 15920797

Synonym: ST0580

Alternate gene names: NA

Gene position: 567765-568238 (Clockwise)

Preceding gene: 15920795

Following gene: 15920798

Centisome position: 21.07

GC content: 34.81

Gene sequence:

>474_bases
ATGATGTACTGGGTTAGAAAAGGTATAATTGGCGGATCTCCCATACCTTATACAGAAGATGAACTAGATGAATGGAAAAG
AGAAGGAGTAAAAAGAATTCTTATTTTACCAGAAGAATGGGAAATAGAAGAAGCTTGGGGTTCAATGGATTATTATTTCT
CTCTCTTAAGAGAGAAAGGATTTGAATTTTTACATGAACCAATACCAGATGGTTATGCACCAACTTTCGATCAGTTCCTT
AGAATTTATGAATGGTTAAAAAAAGGTTATGCAAATCTTGTTCACTGTGTTGGTGGTATTGGAAGAACTGGAACAATTAT
AGCAGGGTATTTAATGTTCGAGGAAGATTTAGATAGTGGAGAAGCAATTGAAGAAGTAAGAAATTATAGGCCCGGGGCTG
TACAAACTTATGAGCAACAATTGTTTCTCTTACAACTTGAAAAGATGAAGGAGAAATGGAGGACTATATTATAG

Upstream 100 bases:

>100_bases
TCAAATTCTGGTATACCAGTTGACAGTCTAATCATAATCTTAAAATTTGTGTATATCCTAATAAATTGTGATGAAGAACA
GCGGATCTGCTGAGTGAGGA

Downstream 100 bases:

>100_bases
ATTTTCTTATAAAATTTCAAAAGTTAATAGCAAAAAATGTGAAAATTCAGCATCTTGGAATAGAAAATGTTAAAAGAATT
TGTGGAACAGATATTGCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Protein-Tyrosine Phosphatase

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MMYWVRKGIIGGSPIPYTEDELDEWKREGVKRILILPEEWEIEEAWGSMDYYFSLLREKGFEFLHEPIPDGYAPTFDQFL
RIYEWLKKGYANLVHCVGGIGRTGTIIAGYLMFEEDLDSGEAIEEVRNYRPGAVQTYEQQLFLLQLEKMKEKWRTIL

Sequences:

>Translated_157_residues
MMYWVRKGIIGGSPIPYTEDELDEWKREGVKRILILPEEWEIEEAWGSMDYYFSLLREKGFEFLHEPIPDGYAPTFDQFL
RIYEWLKKGYANLVHCVGGIGRTGTIIAGYLMFEEDLDSGEAIEEVRNYRPGAVQTYEQQLFLLQLEKMKEKWRTIL
>Mature_157_residues
MMYWVRKGIIGGSPIPYTEDELDEWKREGVKRILILPEEWEIEEAWGSMDYYFSLLREKGFEFLHEPIPDGYAPTFDQFL
RIYEWLKKGYANLVHCVGGIGRTGTIIAGYLMFEEDLDSGEAIEEVRNYRPGAVQTYEQQLFLLQLEKMKEKWRTIL

Specific function: Unknown

COG id: COG2453

COG function: function code T; Predicted protein-tyrosine phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI56786144, Length=83, Percent_Identity=44.578313253012, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18570; Mature: 18570

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS00383 TYR_PHOSPHATASE_1 ; PS50056 TYR_PHOSPHATASE_2 ; PS50055 TYR_PHOSPHATASE_PTP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMYWVRKGIIGGSPIPYTEDELDEWKREGVKRILILPEEWEIEEAWGSMDYYFSLLREKG
CCHHHCCCCCCCCCCCCCHHHHHHHHHHCHHEEEECCCCCCHHHHHCCHHHHHHHHHHHH
FEFLHEPIPDGYAPTFDQFLRIYEWLKKGYANLVHCVGGIGRTGTIIAGYLMFEEDLDSG
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
EAIEEVRNYRPGAVQTYEQQLFLLQLEKMKEKWRTIL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMYWVRKGIIGGSPIPYTEDELDEWKREGVKRILILPEEWEIEEAWGSMDYYFSLLREKG
CCHHHCCCCCCCCCCCCCHHHHHHHHHHCHHEEEECCCCCCHHHHHCCHHHHHHHHHHHH
FEFLHEPIPDGYAPTFDQFLRIYEWLKKGYANLVHCVGGIGRTGTIIAGYLMFEEDLDSG
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
EAIEEVRNYRPGAVQTYEQQLFLLQLEKMKEKWRTIL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA