Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

Click here to switch to the map view.

The map label for this gene is 15920724

Identifier: 15920724

GI number: 15920724

Start: 506538

End: 506864

Strand: Reverse

Name: 15920724

Synonym: ST0507

Alternate gene names: NA

Gene position: 506864-506538 (Counterclockwise)

Preceding gene: 15920725

Following gene: 15920718

Centisome position: 18.81

GC content: 32.11

Gene sequence:

>327_bases
ATGGGATCCAAAATGGATAGTGGAATATCAATAACCGCAGAAAAATTGGTAGATATAACTGCTAGAGTAGCTAGTAAAAT
AAAAGTAGAGGATAGAGAAATTGAAAAAGCAGTTGGCATATCCTCATTTAATTTGGCAAAAAAATCTGTTGAGAAAGTAG
CTTTTTGGTTAACAGAGTCAAGGAATTCTCTACTTTATTGTAAGCTTTGTGGTAAGGGACCATTTACGAAAAGAGGATTA
TATTTACATTTGATAAGACTGCATAGAAACGAAATAAAGACTATGTTAGAAGAAGAGCTCAAAAACGAAATAAGGGCGAT
AATTTAA

Upstream 100 bases:

>100_bases
TTGATCTTAATGATATAAAAATATTTTTAGATGTAGACTTACATAAAAGACTAACAAGACTAGTATCAATTTTAGCCATA
GCCATAGGAATTTCTGCTAT

Downstream 100 bases:

>100_bases
TTAAGTGAAGTTAGTGCTTTATCTAAATCTTCTATTAAATCGTTAACATCCTCTATTCCAACAGAGAGTCTTAACATGGA
ATCCGAAATACCAATGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MGSKMDSGISITAEKLVDITARVASKIKVEDREIEKAVGISSFNLAKKSVEKVAFWLTESRNSLLYCKLCGKGPFTKRGL
YLHLIRLHRNEIKTMLEEELKNEIRAII

Sequences:

>Translated_108_residues
MGSKMDSGISITAEKLVDITARVASKIKVEDREIEKAVGISSFNLAKKSVEKVAFWLTESRNSLLYCKLCGKGPFTKRGL
YLHLIRLHRNEIKTMLEEELKNEIRAII
>Mature_107_residues
GSKMDSGISITAEKLVDITARVASKIKVEDREIEKAVGISSFNLAKKSVEKVAFWLTESRNSLLYCKLCGKGPFTKRGLY
LHLIRLHRNEIKTMLEEELKNEIRAII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12252; Mature: 12120

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSKMDSGISITAEKLVDITARVASKIKVEDREIEKAVGISSFNLAKKSVEKVAFWLTES
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
RNSLLYCKLCGKGPFTKRGLYLHLIRLHRNEIKTMLEEELKNEIRAII
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GSKMDSGISITAEKLVDITARVASKIKVEDREIEKAVGISSFNLAKKSVEKVAFWLTES
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
RNSLLYCKLCGKGPFTKRGLYLHLIRLHRNEIKTMLEEELKNEIRAII
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA