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The map label for this gene is pfdB

Identifier: 15920651

GI number: 15920651

Start: 447963

End: 448340

Strand: Reverse

Name: pfdB

Synonym: ST0440

Alternate gene names: 15920651

Gene position: 448340-447963 (Counterclockwise)

Preceding gene: 297616203

Following gene: 15920650

Centisome position: 16.64

GC content: 30.42

Gene sequence:

>378_bases
ATGACAGAGAGAATTCCCCCTGAACTTCAAACACAATTAGTAAAATTACAACAATTACAAGATCAATTAAATAGACTTCT
TACTGAAAAAAATGTAATAGATAGTGAATTAAGAGAAGTAAATAAAATACTTCAAGAGCTCTCTCAATTACCAGCTGGTA
CGACAGTTTACAAAATAGTTGGAAATTTACTAGTTAAAACAGATAAAGAAACAGTACAAAAGGAGTTAGATGATAGGAAA
GAAATTTTAGAATTAAGATCTAGAACTTATCAGAAACAAGAAAACTTACTGAGAACGCAACTAGAAGATTTGCAGAAAAA
AGTAAATGAACTACTTGCAAAGTATTATCCCCAAAGTGGGGGAGCTATAAAGGCATAA

Upstream 100 bases:

>100_bases
ATAATAAAAGCACCTACAATAAGTAGGGGTAGAGCTATAATGAACTCTTATATATCCTGGATATACACAATATTGGAGAC
AATAAAAAGGGTGAATAAGG

Downstream 100 bases:

>100_bases
TTTTTTGAACCAAGTATTTTATATTATATTAACTTCAATTTATTACTTGATGCTTAGAATTTATGCTGATTATCGTGAAA
AGAACAGCGGAGTCCCAGAT

Product: prefoldin subunit beta

Products: NA

Alternate protein names: GimC subunit beta

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MTERIPPELQTQLVKLQQLQDQLNRLLTEKNVIDSELREVNKILQELSQLPAGTTVYKIVGNLLVKTDKETVQKELDDRK
EILELRSRTYQKQENLLRTQLEDLQKKVNELLAKYYPQSGGAIKA

Sequences:

>Translated_125_residues
MTERIPPELQTQLVKLQQLQDQLNRLLTEKNVIDSELREVNKILQELSQLPAGTTVYKIVGNLLVKTDKETVQKELDDRK
EILELRSRTYQKQENLLRTQLEDLQKKVNELLAKYYPQSGGAIKA
>Mature_124_residues
TERIPPELQTQLVKLQQLQDQLNRLLTEKNVIDSELREVNKILQELSQLPAGTTVYKIVGNLLVKTDKETVQKELDDRKE
ILELRSRTYQKQENLLRTQLEDLQKKVNELLAKYYPQSGGAIKA

Specific function: Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding

COG id: COG1382

COG function: function code O; Prefoldin, chaperonin cofactor

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prefoldin subunit beta family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PFDB_SULTO (Q975H2)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376320.1
- ProteinModelPortal:   Q975H2
- SMR:   Q975H2
- GeneID:   1458376
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST0440
- NMPDR:   fig|273063.1.peg.488
- HOGENOM:   HBG726985
- OMA:   ELPPQIQ
- ProtClustDB:   PRK09343
- BioCyc:   STOK273063:ST0440-MONOMER
- HAMAP:   MF_00307
- InterPro:   IPR012713
- InterPro:   IPR002777
- InterPro:   IPR009053
- TIGRFAMs:   TIGR02338

Pfam domain/function: PF01920 Prefoldin_2; SSF46579 Prefoldin

EC number: NA

Molecular weight: Translated: 14530; Mature: 14399

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERIPPELQTQLVKLQQLQDQLNRLLTEKNVIDSELREVNKILQELSQLPAGTTVYKIV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GNLLVKTDKETVQKELDDRKEILELRSRTYQKQENLLRTQLEDLQKKVNELLAKYYPQSG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GAIKA
CCCCC
>Mature Secondary Structure 
TERIPPELQTQLVKLQQLQDQLNRLLTEKNVIDSELREVNKILQELSQLPAGTTVYKIV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GNLLVKTDKETVQKELDDRKEILELRSRTYQKQENLLRTQLEDLQKKVNELLAKYYPQSG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GAIKA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479