| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920593
Identifier: 15920593
GI number: 15920593
Start: 403979
End: 404746
Strand: Reverse
Name: 15920593
Synonym: ST0390
Alternate gene names: NA
Gene position: 404746-403979 (Counterclockwise)
Preceding gene: 15920600
Following gene: 15920590
Centisome position: 15.02
GC content: 29.43
Gene sequence:
>768_bases ATGTCTACCTATCCCCAAGGATATCCTAATCCATATAACTGGAAAATGATACTGATCTCACAAGCACTAATGATTTTAAT GTCTTTTGTATTATCACTATATCCTCAATATTTCCTCCCCGTTTATATTCTTTATATCATAGTAATTCTCGGAATTACTA GCGTTATGACAATGAGAAGTAATCCTATACTTAGTGAAAGAAAATATTTATCAGATATATCGAACTCAAGAACCCTTTTT GAGGAGAAAAAAGCAGGAGAACTTGTCCAGAAAGATGAAGAATATATGAAGAAAATGCAAGAGTTTGCTATGGCTAGTTT CAAATCCTTTATGTATATGATAATATATATTATTGCAATATTTGTGTTTTATGATGAAGTTTTGCTTAAAATAGTTGGAA GTATATCTGGATATGAAAGACTCTTAGTATACATTATTTATTTTGAAGCATTATTCTTGTTCAATATGTTCGTGTATAGA AGATTAGTAAAATTCCAAGCTATGGAAGTAATGGCACCACAAAGTTATAAAATTACAGAAAAGGGTATATTATCAACGGA TAAAAGTGGAATATTTTTACACTCTAGGCATCTAGTTAATGCAGAGATAAAAGAAAATAGAGAAAAGAGATATATAGAAA TTCATTCTCAAACATCTAAATTGCCATACAGAATTAGACTATACACCACAGAAATAGATAGGTTATTAGAAGTACTAGAT AGAGTAAAGAAACTTGAATTAAAAAGACAACAATCCTCTAGCACTTGA
Upstream 100 bases:
>100_bases ATATCGGCTTGTTAATGTAAAGGAATATGATACTAAAGATGTTAGGACTAGTAAAATCAAACACATATTTATTAAGGTTT TAGAGATATTAATATTAGTC
Downstream 100 bases:
>100_bases AAAATGAAAATGAGAATAAGACGCTAATGTATTATAGACAATGGCTCCATCTTTGTTTTCCCATATTCCTTTCCCTATTC TATTTTTCATAGAGAATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MSTYPQGYPNPYNWKMILISQALMILMSFVLSLYPQYFLPVYILYIIVILGITSVMTMRSNPILSERKYLSDISNSRTLF EEKKAGELVQKDEEYMKKMQEFAMASFKSFMYMIIYIIAIFVFYDEVLLKIVGSISGYERLLVYIIYFEALFLFNMFVYR RLVKFQAMEVMAPQSYKITEKGILSTDKSGIFLHSRHLVNAEIKENREKRYIEIHSQTSKLPYRIRLYTTEIDRLLEVLD RVKKLELKRQQSSST
Sequences:
>Translated_255_residues MSTYPQGYPNPYNWKMILISQALMILMSFVLSLYPQYFLPVYILYIIVILGITSVMTMRSNPILSERKYLSDISNSRTLF EEKKAGELVQKDEEYMKKMQEFAMASFKSFMYMIIYIIAIFVFYDEVLLKIVGSISGYERLLVYIIYFEALFLFNMFVYR RLVKFQAMEVMAPQSYKITEKGILSTDKSGIFLHSRHLVNAEIKENREKRYIEIHSQTSKLPYRIRLYTTEIDRLLEVLD RVKKLELKRQQSSST >Mature_254_residues STYPQGYPNPYNWKMILISQALMILMSFVLSLYPQYFLPVYILYIIVILGITSVMTMRSNPILSERKYLSDISNSRTLFE EKKAGELVQKDEEYMKKMQEFAMASFKSFMYMIIYIIAIFVFYDEVLLKIVGSISGYERLLVYIIYFEALFLFNMFVYRR LVKFQAMEVMAPQSYKITEKGILSTDKSGIFLHSRHLVNAEIKENREKRYIEIHSQTSKLPYRIRLYTTEIDRLLEVLDR VKKLELKRQQSSST
Specific function: Unknown
COG id: COG4920
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30276; Mature: 30145
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTYPQGYPNPYNWKMILISQALMILMSFVLSLYPQYFLPVYILYIIVILGITSVMTMRS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NPILSERKYLSDISNSRTLFEEKKAGELVQKDEEYMKKMQEFAMASFKSFMYMIIYIIAI CCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVFYDEVLLKIVGSISGYERLLVYIIYFEALFLFNMFVYRRLVKFQAMEVMAPQSYKITE HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC KGILSTDKSGIFLHSRHLVNAEIKENREKRYIEIHSQTSKLPYRIRLYTTEIDRLLEVLD CCCCCCCCCCEEEEHHHHHCCHHHHCCHHHEEEEECCCCCCCEEEEEEHHHHHHHHHHHH RVKKLELKRQQSSST HHHHHHHHHHHCCCC >Mature Secondary Structure STYPQGYPNPYNWKMILISQALMILMSFVLSLYPQYFLPVYILYIIVILGITSVMTMRS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NPILSERKYLSDISNSRTLFEEKKAGELVQKDEEYMKKMQEFAMASFKSFMYMIIYIIAI CCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVFYDEVLLKIVGSISGYERLLVYIIYFEALFLFNMFVYRRLVKFQAMEVMAPQSYKITE HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC KGILSTDKSGIFLHSRHLVNAEIKENREKRYIEIHSQTSKLPYRIRLYTTEIDRLLEVLD CCCCCCCCCCEEEEHHHHHCCHHHHCCHHHEEEEECCCCCCCEEEEEEHHHHHHHHHHHH RVKKLELKRQQSSST HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA