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The map label for this gene is 15920532

Identifier: 15920532

GI number: 15920532

Start: 352758

End: 353168

Strand: Direct

Name: 15920532

Synonym: ST0333

Alternate gene names: NA

Gene position: 352758-353168 (Clockwise)

Preceding gene: 15920531

Following gene: 15920533

Centisome position: 13.09

GC content: 30.41

Gene sequence:

>411_bases
ATGAATCTGTTAAAGACCATAGAGAAAGTAAAAGCTAATTGGGGCGGAAAATATTTTTCAATAGAATTTGTTAAAAATCC
AAAAAAAGTAGTTAGAGATTGGAGAAACTCTGGAGGCATTGTGGTTCATTTGACAATGTATGGAATTCCTATAGATAATA
TAATGGAAAAAATAATAAATAAAAATACAAAAATACTAGTTGTTGTAGGATCAGAAAAAGTAGAAGGCTGGTATTATTAT
AATTCAGATTATAACATTGCTATAGGTAACCAGCCTCATTCTGAAGTTGCTGCATTAGCTATTTTTCTGGATAGAATATA
TAAGGGTGGAGAACTAAATATACAATTTAGTGATGCAAAATTATCTATTATACCCCAAGAAAGGGGGAAGAAGGTGAGGA
AAAATGAGTAG

Upstream 100 bases:

>100_bases
ATTGCATCATAGACCAGAAAGGGACAAAAGAGTTACAACGCATGTAGCTCTTGTAGCTAGAGCATTTGGGGCCAAAGGAA
TATTTATTCATGGAGAGGAT

Downstream 100 bases:

>100_bases
TAGGGCAGAAGAATTGATACTTAGCTTGGCAAAGGATCTAGTTGGTGAAGATGCAACAGAATTATTAAAGTTTCTCTTAA
GAAAGAGAATTGAAATGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MNLLKTIEKVKANWGGKYFSIEFVKNPKKVVRDWRNSGGIVVHLTMYGIPIDNIMEKIINKNTKILVVVGSEKVEGWYYY
NSDYNIAIGNQPHSEVAALAIFLDRIYKGGELNIQFSDAKLSIIPQERGKKVRKNE

Sequences:

>Translated_136_residues
MNLLKTIEKVKANWGGKYFSIEFVKNPKKVVRDWRNSGGIVVHLTMYGIPIDNIMEKIINKNTKILVVVGSEKVEGWYYY
NSDYNIAIGNQPHSEVAALAIFLDRIYKGGELNIQFSDAKLSIIPQERGKKVRKNE
>Mature_136_residues
MNLLKTIEKVKANWGGKYFSIEFVKNPKKVVRDWRNSGGIVVHLTMYGIPIDNIMEKIINKNTKILVVVGSEKVEGWYYY
NSDYNIAIGNQPHSEVAALAIFLDRIYKGGELNIQFSDAKLSIIPQERGKKVRKNE

Specific function: Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs

COG id: COG1303

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aTrm56 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TRM56_SULTO (Q975T9)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376201.1
- GeneID:   1458247
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST0333
- NMPDR:   fig|273063.1.peg.369
- HOGENOM:   HBG297370
- ProtClustDB:   CLSK2573344
- BioCyc:   STOK273063:ST0333-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00077
- InterPro:   IPR002845
- PIRSF:   PIRSF016123
- ProDom:   PD016584

Pfam domain/function: PF01994 DUF127

EC number: NA

Molecular weight: Translated: 15559; Mature: 15559

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: BINDING 77-77

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLKTIEKVKANWGGKYFSIEFVKNPKKVVRDWRNSGGIVVHLTMYGIPIDNIMEKIIN
CCHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHC
KNTKILVVVGSEKVEGWYYYNSDYNIAIGNQPHSEVAALAIFLDRIYKGGELNIQFSDAK
CCCEEEEEECCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCE
LSIIPQERGKKVRKNE
EEEEEHHHCCCCCCCC
>Mature Secondary Structure
MNLLKTIEKVKANWGGKYFSIEFVKNPKKVVRDWRNSGGIVVHLTMYGIPIDNIMEKIIN
CCHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHC
KNTKILVVVGSEKVEGWYYYNSDYNIAIGNQPHSEVAALAIFLDRIYKGGELNIQFSDAK
CCCEEEEEECCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCE
LSIIPQERGKKVRKNE
EEEEEHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479