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The map label for this gene is yjjK [C]

Identifier: 15920514

GI number: 15920514

Start: 336172

End: 337983

Strand: Direct

Name: yjjK [C]

Synonym: ST0317

Alternate gene names: 15920514

Gene position: 336172-337983 (Clockwise)

Preceding gene: 15920512

Following gene: 15920515

Centisome position: 12.48

GC content: 31.07

Gene sequence:

>1812_bases
ATGAGAGTTGCAGTAATTAATTATGATTTTTGTAAGCCAGATAAGTGTAATTTAGAATGCATTACTTTCTGTCCTATTAA
TAGATCAGGTAGTAAAGCTATTGAATTATCTGATTTAGTTAAAGGAAAACCGATAATATATGAGGAGACTTGTATCGGTT
GTGGTATATGTATTAAGAAATGCCCTTTTGAGGCTATAGATATTGTAAATCTTCCAGATGAGTATGGCGAAGATGTAATA
CACAGATATAAAATAAATGGTTTCAAGCTTTTCGGAATTGTAACACCAAAAAGAGGATATATAATAGGAATATTAGGGAA
AAATAGTACTGGTAAATCTACTATTCTAAGGATTTTAAGCGGTGAGCTTATTCCTAATTTTGGCGATCCTCAAGCTAAAT
TAACTACTGACGAGGTTTTAGATCATTTTAAAGGAAAAGAAATATATGACTATTTTTATCAATTATATAATAAAAAAATA
AGAGTAGCACATAAGATACAATATGTAGAATATGCAGCTAAATATCTTAAAGGTACTGTAAATGAATTACTAAAAAGAGC
TGATCAAAGGGGAAAAATAGATGAGGTTAGGGAACTCCTTAATATGAAAAGTTTTTGGGAAAAGGATGTAAGATATTTAA
GTGGTGGTGAATTACAGAAATTATTAATAGCAGCCACATTATTGAAGGATGCTGATATATACCTATTTGATGAACCTTCG
TCTTATCTTGATATTAGGGAGAGAATAAATATGGCTTATGGAATACGTGAATTAACTAAAAATAAATATGTTTTGGTAGT
AGAGCACGATTTGATTGTCCTAGATTATTTAGCAGATTTAGTAAACATTATATATGGCAAAAGCTCTGTTTATGGAAGGG
TTTCTAAAACATATAGCAATAGAGTAGGAATTAATAATTTCTTAAGAGGTTATTTACCAGCTGAAAACGTAAAAATAAGA
CAAGAGGAAATAAAGTTCAATTTGAAAGATCTTACAGATTTAGATTTTAACCCACAAGCTTTACAAAAAGTTATTTGGAC
AGATATTACAAAGAAATTAGAGAGCTTTTATTTAGAAGTAAAAGGTGGTTATGCGAGAGAAGGGGAAGTAATAGGTATAG
TAGGTCCTAATGGGATTGGTAAAACAACTTTTATGCGTATTTTAGTGGGTGAAATAAAACCTGATTCTGGTGAGGTCTTA
ACAGAAGGGCTTACATTATCATACAAGCCTCAGAAAATTGTTCCAGATTATGATGGAACAGTGCAGCAATACTTAGAAAA
TGTAAGAAAAGATATATTATCCTCTTCCTCGTGGTTCTACGAAGAAGTTATAAAAAGATTAAATTTGCATAGGATTTTAG
AGTCATATGTAAAAGATTTAAGTGGTGGTGAATTGCAGAAATTATATATTGCAGCAACTCTTTCTAGGGAAGCAGATATA
TATGTTCTTGATGAACCTTCATCATATTTAGATGTAGAAGAACGATATATAGTAGCAAAAGCGATAAAAAGAGTTACTAG
GGAGAGAAAAAGCGTTACTTTTATGGTAGATCACGATTTAGCTCTACATGATTATATAGCAGATAGAATAATGGTATTTT
CTGGCGCTCCAGGGTTTTATGGCATAGGCAAAACTCCACAAACTCTAAGTAGCGGTATGAATGAATTTCTAAAGGAATTA
AGAATAACATTTAGAAGAGATATGGATACTGGAAGACCTCGAGTAAATAAGCCAGGTAGTTATCTAGATAGATTACAAAA
AGAAACTGGGGAATATTACTCTTTAAAGGTTATAAAAGAAGAATCCGCATAA

Upstream 100 bases:

>100_bases
AGTTTGAGGAAGAGGAAGATTGGGAAGAAGAAGAGTTTGAAGAGGAAGAATGGTAATAAATTAAAGTTTTTTCTTACTTT
TATTTAAGTTAGGTGTCATT

Downstream 100 bases:

>100_bases
AGTTTTTATCTGTATAGAGTAATAAGAGAGTGATGAAAACTACTATAAGTGTAATAAAGGCGGATATAGGAAGTTTAGCT
GGTCATCACATAGTTCATCC

Product: putative ATPase RIL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 603; Mature: 603

Protein sequence:

>603_residues
MRVAVINYDFCKPDKCNLECITFCPINRSGSKAIELSDLVKGKPIIYEETCIGCGICIKKCPFEAIDIVNLPDEYGEDVI
HRYKINGFKLFGIVTPKRGYIIGILGKNSTGKSTILRILSGELIPNFGDPQAKLTTDEVLDHFKGKEIYDYFYQLYNKKI
RVAHKIQYVEYAAKYLKGTVNELLKRADQRGKIDEVRELLNMKSFWEKDVRYLSGGELQKLLIAATLLKDADIYLFDEPS
SYLDIRERINMAYGIRELTKNKYVLVVEHDLIVLDYLADLVNIIYGKSSVYGRVSKTYSNRVGINNFLRGYLPAENVKIR
QEEIKFNLKDLTDLDFNPQALQKVIWTDITKKLESFYLEVKGGYAREGEVIGIVGPNGIGKTTFMRILVGEIKPDSGEVL
TEGLTLSYKPQKIVPDYDGTVQQYLENVRKDILSSSSWFYEEVIKRLNLHRILESYVKDLSGGELQKLYIAATLSREADI
YVLDEPSSYLDVEERYIVAKAIKRVTRERKSVTFMVDHDLALHDYIADRIMVFSGAPGFYGIGKTPQTLSSGMNEFLKEL
RITFRRDMDTGRPRVNKPGSYLDRLQKETGEYYSLKVIKEESA

Sequences:

>Translated_603_residues
MRVAVINYDFCKPDKCNLECITFCPINRSGSKAIELSDLVKGKPIIYEETCIGCGICIKKCPFEAIDIVNLPDEYGEDVI
HRYKINGFKLFGIVTPKRGYIIGILGKNSTGKSTILRILSGELIPNFGDPQAKLTTDEVLDHFKGKEIYDYFYQLYNKKI
RVAHKIQYVEYAAKYLKGTVNELLKRADQRGKIDEVRELLNMKSFWEKDVRYLSGGELQKLLIAATLLKDADIYLFDEPS
SYLDIRERINMAYGIRELTKNKYVLVVEHDLIVLDYLADLVNIIYGKSSVYGRVSKTYSNRVGINNFLRGYLPAENVKIR
QEEIKFNLKDLTDLDFNPQALQKVIWTDITKKLESFYLEVKGGYAREGEVIGIVGPNGIGKTTFMRILVGEIKPDSGEVL
TEGLTLSYKPQKIVPDYDGTVQQYLENVRKDILSSSSWFYEEVIKRLNLHRILESYVKDLSGGELQKLYIAATLSREADI
YVLDEPSSYLDVEERYIVAKAIKRVTRERKSVTFMVDHDLALHDYIADRIMVFSGAPGFYGIGKTPQTLSSGMNEFLKEL
RITFRRDMDTGRPRVNKPGSYLDRLQKETGEYYSLKVIKEESA
>Mature_603_residues
MRVAVINYDFCKPDKCNLECITFCPINRSGSKAIELSDLVKGKPIIYEETCIGCGICIKKCPFEAIDIVNLPDEYGEDVI
HRYKINGFKLFGIVTPKRGYIIGILGKNSTGKSTILRILSGELIPNFGDPQAKLTTDEVLDHFKGKEIYDYFYQLYNKKI
RVAHKIQYVEYAAKYLKGTVNELLKRADQRGKIDEVRELLNMKSFWEKDVRYLSGGELQKLLIAATLLKDADIYLFDEPS
SYLDIRERINMAYGIRELTKNKYVLVVEHDLIVLDYLADLVNIIYGKSSVYGRVSKTYSNRVGINNFLRGYLPAENVKIR
QEEIKFNLKDLTDLDFNPQALQKVIWTDITKKLESFYLEVKGGYAREGEVIGIVGPNGIGKTTFMRILVGEIKPDSGEVL
TEGLTLSYKPQKIVPDYDGTVQQYLENVRKDILSSSSWFYEEVIKRLNLHRILESYVKDLSGGELQKLYIAATLSREADI
YVLDEPSSYLDVEERYIVAKAIKRVTRERKSVTFMVDHDLALHDYIADRIMVFSGAPGFYGIGKTPQTLSSGMNEFLKEL
RITFRRDMDTGRPRVNKPGSYLDRLQKETGEYYSLKVIKEESA

Specific function: Unknown

COG id: COG1245

COG function: function code R; Predicted ATPase, RNase L inhibitor (RLI) homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI108773784, Length=599, Percent_Identity=42.237061769616, Blast_Score=486, Evalue=1e-137,
Organism=Homo sapiens, GI108773782, Length=599, Percent_Identity=42.237061769616, Blast_Score=486, Evalue=1e-137,
Organism=Homo sapiens, GI27262624, Length=184, Percent_Identity=30.9782608695652, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI27262626, Length=184, Percent_Identity=30.9782608695652, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI27436953, Length=179, Percent_Identity=28.4916201117318, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI6005701, Length=180, Percent_Identity=30, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI27477115, Length=181, Percent_Identity=28.7292817679558, Blast_Score=74, Evalue=5e-13,
Organism=Escherichia coli, GI2367384, Length=524, Percent_Identity=24.236641221374, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1788210, Length=472, Percent_Identity=25.2118644067797, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788165, Length=185, Percent_Identity=30.2702702702703, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1788897, Length=476, Percent_Identity=24.1596638655462, Blast_Score=83, Evalue=7e-17,
Organism=Escherichia coli, GI1787041, Length=505, Percent_Identity=25.1485148514851, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1786345, Length=187, Percent_Identity=27.807486631016, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1787500, Length=194, Percent_Identity=28.3505154639175, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1789751, Length=498, Percent_Identity=22.6907630522088, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI87081782, Length=156, Percent_Identity=34.6153846153846, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787029, Length=217, Percent_Identity=26.7281105990783, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1786803, Length=173, Percent_Identity=24.8554913294798, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1789962, Length=258, Percent_Identity=24.4186046511628, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1788225, Length=205, Percent_Identity=28.780487804878, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1789891, Length=193, Percent_Identity=25.3886010362694, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1790739, Length=226, Percent_Identity=24.7787610619469, Blast_Score=66, Evalue=8e-12,
Organism=Escherichia coli, GI1790467, Length=183, Percent_Identity=26.775956284153, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1786703, Length=176, Percent_Identity=30.1136363636364, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17555800, Length=596, Percent_Identity=39.261744966443, Blast_Score=469, Evalue=1e-132,
Organism=Saccharomyces cerevisiae, GI6320296, Length=601, Percent_Identity=42.2628951747088, Blast_Score=488, Evalue=1e-138,
Organism=Drosophila melanogaster, GI24661270, Length=596, Percent_Identity=40.6040268456376, Blast_Score=484, Evalue=1e-137,
Organism=Drosophila melanogaster, GI21355589, Length=596, Percent_Identity=40.6040268456376, Blast_Score=484, Evalue=1e-137,
Organism=Drosophila melanogaster, GI221500365, Length=199, Percent_Identity=28.1407035175879, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI116007184, Length=199, Percent_Identity=28.1407035175879, Blast_Score=75, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24648279, Length=164, Percent_Identity=31.7073170731707, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI161078426, Length=165, Percent_Identity=32.1212121212121, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013283
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR007209 [H]

Pfam domain/function: PF00005 ABC_tran; PF04068 RLI [H]

EC number: NA

Molecular weight: Translated: 69033; Mature: 69033

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVAVINYDFCKPDKCNLECITFCPINRSGSKAIELSDLVKGKPIIYEETCIGCGICIKK
CEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEHHHHHCCCCEEEECCCCHHHHHHHH
CPFEAIDIVNLPDEYGEDVIHRYKINGFKLFGIVTPKRGYIIGILGKNSTGKSTILRILS
CCCCCEEEECCCHHHHHHHHHHEECCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHH
GELIPNFGDPQAKLTTDEVLDHFKGKEIYDYFYQLYNKKIRVAHKIQYVEYAAKYLKGTV
CCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
NELLKRADQRGKIDEVRELLNMKSFWEKDVRYLSGGELQKLLIAATLLKDADIYLFDEPS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCC
SYLDIRERINMAYGIRELTKNKYVLVVEHDLIVLDYLADLVNIIYGKSSVYGRVSKTYSN
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
RVGINNFLRGYLPAENVKIRQEEIKFNLKDLTDLDFNPQALQKVIWTDITKKLESFYLEV
CCCHHHHHHCCCCCCCCEEEHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEE
KGGYAREGEVIGIVGPNGIGKTTFMRILVGEIKPDSGEVLTEGLTLSYKPQKIVPDYDGT
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEECCCEEEECCCCCCCCCCCH
VQQYLENVRKDILSSSSWFYEEVIKRLNLHRILESYVKDLSGGELQKLYIAATLSREADI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCE
YVLDEPSSYLDVEERYIVAKAIKRVTRERKSVTFMVDHDLALHDYIADRIMVFSGAPGFY
EEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHEEEEECCCCCC
GIGKTPQTLSSGMNEFLKELRITFRRDMDTGRPRVNKPGSYLDRLQKETGEYYSLKVIKE
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEC
ESA
CCC
>Mature Secondary Structure
MRVAVINYDFCKPDKCNLECITFCPINRSGSKAIELSDLVKGKPIIYEETCIGCGICIKK
CEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEHHHHHCCCCEEEECCCCHHHHHHHH
CPFEAIDIVNLPDEYGEDVIHRYKINGFKLFGIVTPKRGYIIGILGKNSTGKSTILRILS
CCCCCEEEECCCHHHHHHHHHHEECCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHH
GELIPNFGDPQAKLTTDEVLDHFKGKEIYDYFYQLYNKKIRVAHKIQYVEYAAKYLKGTV
CCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
NELLKRADQRGKIDEVRELLNMKSFWEKDVRYLSGGELQKLLIAATLLKDADIYLFDEPS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCC
SYLDIRERINMAYGIRELTKNKYVLVVEHDLIVLDYLADLVNIIYGKSSVYGRVSKTYSN
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
RVGINNFLRGYLPAENVKIRQEEIKFNLKDLTDLDFNPQALQKVIWTDITKKLESFYLEV
CCCHHHHHHCCCCCCCCEEEHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEE
KGGYAREGEVIGIVGPNGIGKTTFMRILVGEIKPDSGEVLTEGLTLSYKPQKIVPDYDGT
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEECCCEEEECCCCCCCCCCCH
VQQYLENVRKDILSSSSWFYEEVIKRLNLHRILESYVKDLSGGELQKLYIAATLSREADI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCE
YVLDEPSSYLDVEERYIVAKAIKRVTRERKSVTFMVDHDLALHDYIADRIMVFSGAPGFY
EEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHEEEEECCCCCC
GIGKTPQTLSSGMNEFLKELRITFRRDMDTGRPRVNKPGSYLDRLQKETGEYYSLKVIKE
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEC
ESA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]