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The map label for this gene is dcd [H]

Identifier: 15920406

GI number: 15920406

Start: 247776

End: 248393

Strand: Direct

Name: dcd [H]

Synonym: ST0226

Alternate gene names: 15920406

Gene position: 247776-248393 (Clockwise)

Preceding gene: 15920403

Following gene: 15920412

Centisome position: 9.19

GC content: 34.47

Gene sequence:

>618_bases
ATGAAGACTCAGAGTTACTCTGACTTTTGCTTTATAAATATAATCCGTCAAAATATAATATACATAATGATTCTCGGTGA
TCGTGATTTAAAATATTATCTAGAGAAAGGATGGATAAAAATAGACCCATTAAGAGAAGATACCGTTAGGGAAAACGGAG
TTGACCTTAGAGTTGGAGGAGAAATTGCTAGATTTATAAAAACGGATAAAGTATTTGATCCAGATAATCCCGATCCTGCA
TTTTTCAAAATCGAAAAAATTGAGGAGTTTATTATTCAACCATATGAACATGTACTTTTAACCACAGAAGAATATATTGA
ACTTCCAAATGATGTTATGGCTTTTGTTAACCTTCGCTCATCCTTTGCGCGACTAGGCTTGTTTATTCCACCTACTATAG
TAGATGCTGGATTTAAAGGGCAAATAACAATTGAGGTTGTAGGTTCATCGTTTCCCGTATTATTAAGGAGAGGGACACGT
TTCATACACTTAATATTTGCAAGAACATTATCACCCGTAGAACACCCGTATCAAGGAAAATATCAAGGCCAAAAAGGCGT
TACTTTACCGAAATTTAGAACAGAGGCTTCCAAGTTTTTGTCTCTCCATCAAAAATAA

Upstream 100 bases:

>100_bases
TATGAGTTTAAACTCCATACTTTAAAATATTTTAGCTTAACTTTTATATTTATAGCTTTGACGATATAATACAGTGATGA
AAACCCGGCATTTCAGATAG

Downstream 100 bases:

>100_bases
TTAGACCTTCACTAACTAACCTTTTGAAAAGTTTAGCCTCTTTTGGATCTAATTTAGATTCAGCTTCTGCAGGATCTGGA
CTTTTTATTTCCTTTAGTTT

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MKTQSYSDFCFINIIRQNIIYIMILGDRDLKYYLEKGWIKIDPLREDTVRENGVDLRVGGEIARFIKTDKVFDPDNPDPA
FFKIEKIEEFIIQPYEHVLLTTEEYIELPNDVMAFVNLRSSFARLGLFIPPTIVDAGFKGQITIEVVGSSFPVLLRRGTR
FIHLIFARTLSPVEHPYQGKYQGQKGVTLPKFRTEASKFLSLHQK

Sequences:

>Translated_205_residues
MKTQSYSDFCFINIIRQNIIYIMILGDRDLKYYLEKGWIKIDPLREDTVRENGVDLRVGGEIARFIKTDKVFDPDNPDPA
FFKIEKIEEFIIQPYEHVLLTTEEYIELPNDVMAFVNLRSSFARLGLFIPPTIVDAGFKGQITIEVVGSSFPVLLRRGTR
FIHLIFARTLSPVEHPYQGKYQGQKGVTLPKFRTEASKFLSLHQK
>Mature_205_residues
MKTQSYSDFCFINIIRQNIIYIMILGDRDLKYYLEKGWIKIDPLREDTVRENGVDLRVGGEIARFIKTDKVFDPDNPDPA
FFKIEKIEEFIIQPYEHVLLTTEEYIELPNDVMAFVNLRSSFARLGLFIPPTIVDAGFKGQITIEVVGSSFPVLLRRGTR
FIHLIFARTLSPVEHPYQGKYQGQKGVTLPKFRTEASKFLSLHQK

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

Organism=Escherichia coli, GI1788379, Length=191, Percent_Identity=31.413612565445, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 23749; Mature: 23749

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTQSYSDFCFINIIRQNIIYIMILGDRDLKYYLEKGWIKIDPLREDTVRENGVDLRVGG
CCCCCCCCHHHHHEECCCEEEEEEECCCCHHHHHHCCCEEECCCCCHHHHCCCCEEEECH
EIARFIKTDKVFDPDNPDPAFFKIEKIEEFIIQPYEHVLLTTEEYIELPNDVMAFVNLRS
HHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHCCHHHEEECCHHHHHCCHHHHHHHHHHH
SFARLGLFIPPTIVDAGFKGQITIEVVGSSFPVLLRRGTRFIHLIFARTLSPVEHPYQGK
HHHHCCCCCCHHHCCCCCCCEEEEEEECCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCC
YQGQKGVTLPKFRTEASKFLSLHQK
CCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTQSYSDFCFINIIRQNIIYIMILGDRDLKYYLEKGWIKIDPLREDTVRENGVDLRVGG
CCCCCCCCHHHHHEECCCEEEEEEECCCCHHHHHHCCCEEECCCCCHHHHCCCCEEEECH
EIARFIKTDKVFDPDNPDPAFFKIEKIEEFIIQPYEHVLLTTEEYIELPNDVMAFVNLRS
HHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHCCHHHEEECCHHHHHCCHHHHHHHHHHH
SFARLGLFIPPTIVDAGFKGQITIEVVGSSFPVLLRRGTRFIHLIFARTLSPVEHPYQGK
HHHHCCCCCCHHHCCCCCCCEEEEEEECCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCC
YQGQKGVTLPKFRTEASKFLSLHQK
CCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479 [H]