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The map label for this gene is ygfA [C]

Identifier: 15920351

GI number: 15920351

Start: 197911

End: 198630

Strand: Direct

Name: ygfA [C]

Synonym: ST0172

Alternate gene names: 15920351

Gene position: 197911-198630 (Clockwise)

Preceding gene: 15920350

Following gene: 15920359

Centisome position: 7.34

GC content: 33.06

Gene sequence:

>720_bases
ATGCTCTCAAAATCTGAAATTAGGGAAAAGATTTGGAAAATTCTTGAAGATACTAACATTGCTTCATTTCCAAGGCCAGT
ATATGGTAGGATTCCGAATTTTAAAGGAGCAGAAGAAGCTGCAAAAAAATTGACAGAAACTAAGGAGTTTAAAGAAGCAA
AAATAGTAAAAGTTAATCCGGATTCTCCTCAAAGACCCGTTAGAGAACTAGTGTTAAGGAGTGGGAAAATTCTTCTCGTA
CCTACTCCTAGACTAAAAGGAGAGTTTTATTTACTTGATCCTAATAAAATAAAGGATTATAAAGAGGCTTCAAAGATAAG
CGGTTTCTCAAGGTTTGGTGAAGTAGTTGATTTAAACTCAATTTCAAGAGTTGATTTTATAGTTGCAGGTTCTGTGGCCG
TAACCATGTATGGAGATAGAGTAGGTAAAGGGGAAGGGTATAGTGAATTGGAATTTGCAATATTAAGAGAATTAGGTAAG
GTTAATGAAAACACTCCTATAGCTACTACTGTACATGATATACAAATTGTAGATTTTATTCCAACAGAACCTTATGATGT
ACCTATTGATATTATAGCCACACCTACAAGAGTTATTTACACAAAGAGAAAAAGAGAGAAACCAAAAGGTATTTATCTTG
AATACTTAACTAAAGAGAAAATTGAAGAAACTCCATTTTTGAAGAAGTTTTTAACCCAGAGAGGATATAAGTTGCTTTAA

Upstream 100 bases:

>100_bases
ATTATTAATAAAATTGGAGAGAGGTATGTTATAGGTGTTAAGATTTTCTCGTTCATAGTACTTTTAGCCTTTGGAATATA
TATCTTATATCAGGGTATTT

Downstream 100 bases:

>100_bases
TTGATCACATAATTCATTAGCTTTTTTCTCTAATTTAGTTCTTATTTCGTCCTTGTTAACATAATACATGAATTTTGGTC
TTCCCCCTTTATTATTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: 5-Formyltetrahydrofolate Cyclo-Ligase-Related Protein

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MLSKSEIREKIWKILEDTNIASFPRPVYGRIPNFKGAEEAAKKLTETKEFKEAKIVKVNPDSPQRPVRELVLRSGKILLV
PTPRLKGEFYLLDPNKIKDYKEASKISGFSRFGEVVDLNSISRVDFIVAGSVAVTMYGDRVGKGEGYSELEFAILRELGK
VNENTPIATTVHDIQIVDFIPTEPYDVPIDIIATPTRVIYTKRKREKPKGIYLEYLTKEKIEETPFLKKFLTQRGYKLL

Sequences:

>Translated_239_residues
MLSKSEIREKIWKILEDTNIASFPRPVYGRIPNFKGAEEAAKKLTETKEFKEAKIVKVNPDSPQRPVRELVLRSGKILLV
PTPRLKGEFYLLDPNKIKDYKEASKISGFSRFGEVVDLNSISRVDFIVAGSVAVTMYGDRVGKGEGYSELEFAILRELGK
VNENTPIATTVHDIQIVDFIPTEPYDVPIDIIATPTRVIYTKRKREKPKGIYLEYLTKEKIEETPFLKKFLTQRGYKLL
>Mature_239_residues
MLSKSEIREKIWKILEDTNIASFPRPVYGRIPNFKGAEEAAKKLTETKEFKEAKIVKVNPDSPQRPVRELVLRSGKILLV
PTPRLKGEFYLLDPNKIKDYKEASKISGFSRFGEVVDLNSISRVDFIVAGSVAVTMYGDRVGKGEGYSELEFAILRELGK
VNENTPIATTVHDIQIVDFIPTEPYDVPIDIIATPTRVIYTKRKREKPKGIYLEYLTKEKIEETPFLKKFLTQRGYKLL

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI226823324, Length=236, Percent_Identity=46.6101694915254, Blast_Score=203, Evalue=8e-53,
Organism=Homo sapiens, GI226823322, Length=236, Percent_Identity=46.6101694915254, Blast_Score=203, Evalue=1e-52,
Organism=Homo sapiens, GI226823319, Length=236, Percent_Identity=44.9152542372881, Blast_Score=189, Evalue=2e-48,
Organism=Homo sapiens, GI116875838, Length=236, Percent_Identity=44.9152542372881, Blast_Score=189, Evalue=2e-48,
Organism=Homo sapiens, GI226823326, Length=223, Percent_Identity=44.3946188340807, Blast_Score=173, Evalue=1e-43,
Organism=Drosophila melanogaster, GI161078016, Length=235, Percent_Identity=33.1914893617021, Blast_Score=126, Evalue=1e-29,
Organism=Drosophila melanogaster, GI21355167, Length=235, Percent_Identity=33.1914893617021, Blast_Score=126, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27310; Mature: 27310

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKSEIREKIWKILEDTNIASFPRPVYGRIPNFKGAEEAAKKLTETKEFKEAKIVKVNP
CCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECC
DSPQRPVRELVLRSGKILLVPTPRLKGEFYLLDPNKIKDYKEASKISGFSRFGEVVDLNS
CCCHHHHHHHHHHCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCEEECCC
ISRVDFIVAGSVAVTMYGDRVGKGEGYSELEFAILRELGKVNENTPIATTVHDIQIVDFI
CCCEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEC
PTEPYDVPIDIIATPTRVIYTKRKREKPKGIYLEYLTKEKIEETPFLKKFLTQRGYKLL
CCCCCCCCEEEEECCHHHEEEHHHCCCCCCEEHHHHHHHHHHCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLSKSEIREKIWKILEDTNIASFPRPVYGRIPNFKGAEEAAKKLTETKEFKEAKIVKVNP
CCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECC
DSPQRPVRELVLRSGKILLVPTPRLKGEFYLLDPNKIKDYKEASKISGFSRFGEVVDLNS
CCCHHHHHHHHHHCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCEEECCC
ISRVDFIVAGSVAVTMYGDRVGKGEGYSELEFAILRELGKVNENTPIATTVHDIQIVDFI
CCCEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEC
PTEPYDVPIDIIATPTRVIYTKRKREKPKGIYLEYLTKEKIEETPFLKKFLTQRGYKLL
CCCCCCCCEEEEECCHHHEEEHHHCCCCCCEEHHHHHHHHHHCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA