| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15920240
Identifier: 15920240
GI number: 15920240
Start: 80975
End: 81391
Strand: Direct
Name: 15920240
Synonym: ST0061
Alternate gene names: NA
Gene position: 80975-81391 (Clockwise)
Preceding gene: 15920239
Following gene: 15920243
Centisome position: 3.0
GC content: 34.53
Gene sequence:
>417_bases ATGGATTTACAAAACATCTTGGAAAACAATGATAGAGTATTTAAGTTTTTAGAAGTTAAGATCTTAGATGTAAAGCCAGG TTATTCTAAGATTCAAATTCCTTATAAGGAAGAGTTCTGTAGGAGAGGTAATGTGTTAAATGGTGGAATAATAATGACCG CTATCGATTTTGCCGGAGGTTTAGCTACTTTATCTGTAAATGATGGAATAGACCAAGTTACTCAAGAGTTAAAGGTTAAC TTTCTTGAACCAATGTATAAGGGACCATTTACTGTTGAAGGTAAGGTGGTAAGAAAAGGAAGGACTGCTGTTATAGTACA AATAGAGTTTAGGGATAGTGAAGGAAAATTAGGTGCTATAGCCTTAGGTACCTGGTATATAATAAGGGATAGGGTGGTTA AAAAGGAAGGAGGATAA
Upstream 100 bases:
>100_bases TAATATAAACCCAATATCTAAACGGATCTTACTCTATACTTGTGGCAATATCAAGCTAATTATAGTAAGACTTTTTTCTT GCAAAGGTTATTAGAGTTTC
Downstream 100 bases:
>100_bases TAAAACGTTACATGTTTCTAACTAATTCTCTGATCACTTTCTTATCTAATTTCCCCGTACTAGTTTTTGGTAATTCGTTA ATGAATAGTACCTTATCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MDLQNILENNDRVFKFLEVKILDVKPGYSKIQIPYKEEFCRRGNVLNGGIIMTAIDFAGGLATLSVNDGIDQVTQELKVN FLEPMYKGPFTVEGKVVRKGRTAVIVQIEFRDSEGKLGAIALGTWYIIRDRVVKKEGG
Sequences:
>Translated_138_residues MDLQNILENNDRVFKFLEVKILDVKPGYSKIQIPYKEEFCRRGNVLNGGIIMTAIDFAGGLATLSVNDGIDQVTQELKVN FLEPMYKGPFTVEGKVVRKGRTAVIVQIEFRDSEGKLGAIALGTWYIIRDRVVKKEGG >Mature_138_residues MDLQNILENNDRVFKFLEVKILDVKPGYSKIQIPYKEEFCRRGNVLNGGIIMTAIDFAGGLATLSVNDGIDQVTQELKVN FLEPMYKGPFTVEGKVVRKGRTAVIVQIEFRDSEGKLGAIALGTWYIIRDRVVKKEGG
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioesterase PaaI family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y061_SULTO (Q976X8)
Other databases:
- EMBL: BA000023 - RefSeq: NP_375909.1 - ProteinModelPortal: Q976X8 - GeneID: 1457942 - GenomeReviews: BA000023_GR - KEGG: sto:ST0061 - NMPDR: fig|273063.1.peg.77 - HOGENOM: HBG646779 - OMA: NDGDDQV - ProtClustDB: CLSK803218 - BioCyc: STOK273063:ST0061-MONOMER - InterPro: IPR003736 - InterPro: IPR006683 - TIGRFAMs: TIGR00369
Pfam domain/function: PF03061 4HBT
EC number: NA
Molecular weight: Translated: 15465; Mature: 15465
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLQNILENNDRVFKFLEVKILDVKPGYSKIQIPYKEEFCRRGNVLNGGIIMTAIDFAGG CCHHHHHCCCCEEEEEEEEEEEEECCCCCEEEECHHHHHHHCCCEEECCEEEEEEECCCC LATLSVNDGIDQVTQELKVNFLEPMYKGPFTVEGKVVRKGRTAVIVQIEFRDSEGKLGAI EEEEEECCCHHHHHHHHHHHHCCHHHCCCEEECCEEEECCCEEEEEEEEEECCCCCEEEE ALGTWYIIRDRVVKKEGG EEEEEEEEECEEEECCCC >Mature Secondary Structure MDLQNILENNDRVFKFLEVKILDVKPGYSKIQIPYKEEFCRRGNVLNGGIIMTAIDFAGG CCHHHHHCCCCEEEEEEEEEEEEECCCCCEEEECHHHHHHHCCCEEECCEEEEEEECCCC LATLSVNDGIDQVTQELKVNFLEPMYKGPFTVEGKVVRKGRTAVIVQIEFRDSEGKLGAI EEEEEECCCHHHHHHHHHHHHCCHHHCCCEEECCEEEECCCEEEEEEEEEECCCCCEEEE ALGTWYIIRDRVVKKEGG EEEEEEEEECEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11572479