| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920208
Identifier: 15920208
GI number: 15920208
Start: 49463
End: 50755
Strand: Direct
Name: 15920208
Synonym: ST0035
Alternate gene names: NA
Gene position: 49463-50755 (Clockwise)
Preceding gene: 15920207
Following gene: 15920211
Centisome position: 1.84
GC content: 34.26
Gene sequence:
>1293_bases ATGATATGTACGGTAATCCCGATTAATAGATCGGACTTCACTTTTGAGAGTTCATTTTCCTCGATTGTTAGGACTTATGA GCTATTCCGACCTGAAAAATACGTAATAATTCACGCAAAGTTTAATTCAGTCCACTTGGAAAAACTGAAATACTTATTCG AAAAATTGAAAGAAAAAGGGAAAAAGATAGAGATGGTAAGTACTGAAAGTATAAGTGATTTTAATAGCTTTAAAAATATC ATCGATGAAAAAACAAAGGAATGTGAAAAAGTATATCTAGTTCCTACTTCCGGAGCTAACATAATAGCTGTATTTCTCGC TTTATTGAGTAAGGAAAATCAGAGGTATCAACTAGTTAACTACATATTTTCCTTTGGTCCATGGACTCATTTCTATTACC CATTTGTGCCCAGAGATCTTGAAGTAGCCTATACACTTGAAGGCAAAATAACTAATAAACCTTCTCTAGATCTGAACCTT GATCCCTATCTGGAAAGGAATGAGTTTGTTAGGAATATACAGATGTTTGCCCTTAAAATTAATAAGAAATTTGACAGCTG TAGAGAGATGAGCCTTAAAGTCAACGGAGTAGATATACTAAGGACTTGGAGTGTAAATTATCATGAGACGGTAAAGTTAC TTAATAAGCACGTCTTTTCTAATGAGGATGTAAGTGAAGCCTTACTTAAACTTTCTGGAGCCTATGACATTCTCGTTGAA GGGAAAAAGCTAGAAGAAGTCTCCTATGGCAGAACTGTAGTAATCGACACCAACCTTATCTATTTCGGAATTCACACTCA TGAGATTAGGGATTTGGCTATACCATATTGTGCAGATGATGAGATACTTCGTAGTGTAAATAAAAAGGATAATCCTATTA GCTATATTATTTTCTATGTTTACCAAGCTCTTCTACAGAGGAGTAAAATTATACCCAGTAAACTTACTATTTGTGATGTT GCAATTCCAAAGATAGAACCGGATTTAATAAAAGGTGCACTGGTCATAACTAACGATAAGAACGCGTTTGAAAGATGGAA AGAACTCAGCTTAAGGTCTTATGCTGAAGTAGAATACGCTGAACTAGATAAAAGCAATAGGAGGAATAGTTTTGCCGAAG TTACTAGTGTTATCTTTAACATGGTTTCCTTATTGAAGCTTATGCACGAGAAAATACCGCAAAGTTATAAAAACTCCATG TTGAAACTCGATATTGTAGAAATATGTTGTAATAAAACGTGGTGCATAGATGTTTTAAAAGCGAATAAAAGTGATGACCA GAAAACTACCTAA
Upstream 100 bases:
>100_bases AACTTTATCGGTAGTATCGGGAATTTCGTATTAACGAGGAAAATTAGAACAACTGCTATTCTTTATAAACATTTATATTT CAGTACTATCCATATTTTTT
Downstream 100 bases:
>100_bases CTAGTATTTCACTTATAACCGTTTGTACCTACACTTTTATTCATAATTGAGTGTAGGACTTAGTCTAAACCACCTATTGT TAGGTGGGTCACAGGACTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MICTVIPINRSDFTFESSFSSIVRTYELFRPEKYVIIHAKFNSVHLEKLKYLFEKLKEKGKKIEMVSTESISDFNSFKNI IDEKTKECEKVYLVPTSGANIIAVFLALLSKENQRYQLVNYIFSFGPWTHFYYPFVPRDLEVAYTLEGKITNKPSLDLNL DPYLERNEFVRNIQMFALKINKKFDSCREMSLKVNGVDILRTWSVNYHETVKLLNKHVFSNEDVSEALLKLSGAYDILVE GKKLEEVSYGRTVVIDTNLIYFGIHTHEIRDLAIPYCADDEILRSVNKKDNPISYIIFYVYQALLQRSKIIPSKLTICDV AIPKIEPDLIKGALVITNDKNAFERWKELSLRSYAEVEYAELDKSNRRNSFAEVTSVIFNMVSLLKLMHEKIPQSYKNSM LKLDIVEICCNKTWCIDVLKANKSDDQKTT
Sequences:
>Translated_430_residues MICTVIPINRSDFTFESSFSSIVRTYELFRPEKYVIIHAKFNSVHLEKLKYLFEKLKEKGKKIEMVSTESISDFNSFKNI IDEKTKECEKVYLVPTSGANIIAVFLALLSKENQRYQLVNYIFSFGPWTHFYYPFVPRDLEVAYTLEGKITNKPSLDLNL DPYLERNEFVRNIQMFALKINKKFDSCREMSLKVNGVDILRTWSVNYHETVKLLNKHVFSNEDVSEALLKLSGAYDILVE GKKLEEVSYGRTVVIDTNLIYFGIHTHEIRDLAIPYCADDEILRSVNKKDNPISYIIFYVYQALLQRSKIIPSKLTICDV AIPKIEPDLIKGALVITNDKNAFERWKELSLRSYAEVEYAELDKSNRRNSFAEVTSVIFNMVSLLKLMHEKIPQSYKNSM LKLDIVEICCNKTWCIDVLKANKSDDQKTT >Mature_430_residues MICTVIPINRSDFTFESSFSSIVRTYELFRPEKYVIIHAKFNSVHLEKLKYLFEKLKEKGKKIEMVSTESISDFNSFKNI IDEKTKECEKVYLVPTSGANIIAVFLALLSKENQRYQLVNYIFSFGPWTHFYYPFVPRDLEVAYTLEGKITNKPSLDLNL DPYLERNEFVRNIQMFALKINKKFDSCREMSLKVNGVDILRTWSVNYHETVKLLNKHVFSNEDVSEALLKLSGAYDILVE GKKLEEVSYGRTVVIDTNLIYFGIHTHEIRDLAIPYCADDEILRSVNKKDNPISYIIFYVYQALLQRSKIIPSKLTICDV AIPKIEPDLIKGALVITNDKNAFERWKELSLRSYAEVEYAELDKSNRRNSFAEVTSVIFNMVSLLKLMHEKIPQSYKNSM LKLDIVEICCNKTWCIDVLKANKSDDQKTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49965; Mature: 49965
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MICTVIPINRSDFTFESSFSSIVRTYELFRPEKYVIIHAKFNSVHLEKLKYLFEKLKEKG CEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHCC KKIEMVSTESISDFNSFKNIIDEKTKECEKVYLVPTSGANIIAVFLALLSKENQRYQLVN CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHH YIFSFGPWTHFYYPFVPRDLEVAYTLEGKITNKPSLDLNLDPYLERNEFVRNIQMFALKI HHHHCCCCCCEECCCCCCCCEEEEEEECEECCCCCCCCCCCCCCCHHHHHHHHHHEEEEE NKKFDSCREMSLKVNGVDILRTWSVNYHETVKLLNKHVFSNEDVSEALLKLSGAYDILVE CCHHHHHHHCEEEECCEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEC GKKLEEVSYGRTVVIDTNLIYFGIHTHEIRDLAIPYCADDEILRSVNKKDNPISYIIFYV CCHHHHCCCCCEEEEECCEEEEEEEHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHH YQALLQRSKIIPSKLTICDVAIPKIEPDLIKGALVITNDKNAFERWKELSLRSYAEVEYA HHHHHHHCCCCCCCEEEEEEECCCCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHCHHHH ELDKSNRRNSFAEVTSVIFNMVSLLKLMHEKIPQSYKNSMLKLDIVEICCNKTWCIDVLK HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEHHHHHCCCCEEEEEEE ANKSDDQKTT CCCCCCCCCC >Mature Secondary Structure MICTVIPINRSDFTFESSFSSIVRTYELFRPEKYVIIHAKFNSVHLEKLKYLFEKLKEKG CEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHCC KKIEMVSTESISDFNSFKNIIDEKTKECEKVYLVPTSGANIIAVFLALLSKENQRYQLVN CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHH YIFSFGPWTHFYYPFVPRDLEVAYTLEGKITNKPSLDLNLDPYLERNEFVRNIQMFALKI HHHHCCCCCCEECCCCCCCCEEEEEEECEECCCCCCCCCCCCCCCHHHHHHHHHHEEEEE NKKFDSCREMSLKVNGVDILRTWSVNYHETVKLLNKHVFSNEDVSEALLKLSGAYDILVE CCHHHHHHHCEEEECCEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEC GKKLEEVSYGRTVVIDTNLIYFGIHTHEIRDLAIPYCADDEILRSVNKKDNPISYIIFYV CCHHHHCCCCCEEEEECCEEEEEEEHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHH YQALLQRSKIIPSKLTICDVAIPKIEPDLIKGALVITNDKNAFERWKELSLRSYAEVEYA HHHHHHHCCCCCCCEEEEEEECCCCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHCHHHH ELDKSNRRNSFAEVTSVIFNMVSLLKLMHEKIPQSYKNSMLKLDIVEICCNKTWCIDVLK HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEHHHHHCCCCEEEEEEE ANKSDDQKTT CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA