| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920194
Identifier: 15920194
GI number: 15920194
Start: 31149
End: 31703
Strand: Direct
Name: 15920194
Synonym: ST0022
Alternate gene names: NA
Gene position: 31149-31703 (Clockwise)
Preceding gene: 15920192
Following gene: 15920200
Centisome position: 1.16
GC content: 39.64
Gene sequence:
>555_bases ATGACTATTTCTGGTGTAACGGTAAAGCATTACGCCTACTGTCCTCATATTGTAAGGTTAGAAGCATTAGGCTTCTCAGA GAGAGTAAGCGAGGCTATGTTGGAGGGTCAATTAATAGATAAGGAGAAGGAGGTGAGCTTTCTCTTTACAAAATATAAGG AGATAATAAGAAAACCCGTTTATAGATGGAAGGATCTAATCGGCTCACCGGATTTTGTCCTTCACGCATATAATTACTAC ACACCTTTAGATGTTAAAGCGGGAAAGGTTCCACGATTAGACCATAAGTATCAAATCTTATTCTACTCCTATATAATGGA TAGACTGGGTATGAACGTTAAGGAGGCAATGCTCTATTACATTGCTGGGAAGAAGCTAATAAGGCTTCAGTACAGTGAGA CTGAGAAGAGGTTTGTGGAGAAGCTGATAGGTTGGATAAGAGAGGCAATGAACAGTGAAGTAAAAATAGTTCAGAAAAAG GAGAAGTGTGAGAACTGCGGCTTTTTCTCGTACTGTAAGCCCAGAAGAGTAGGAAAGCTGTATTATACCCTTTAG
Upstream 100 bases:
>100_bases TTTTAAGGTCAATGAAGTTTCCGAAAAAATGTCAGATAGTGATCTTTCAAAGTTTAAGAAAAGAGAGAATGTATATAACT CATCTTGTTAATCTTATAAT
Downstream 100 bases:
>100_bases AAAAATACTATTGTCCTAGTAGTTGATGACATTAGGTCACAGAAGTAACTCCTACAGTCTCCTTTTGAGTAAACGTTAGA CAGTTTATCCTTTAGTCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MTISGVTVKHYAYCPHIVRLEALGFSERVSEAMLEGQLIDKEKEVSFLFTKYKEIIRKPVYRWKDLIGSPDFVLHAYNYY TPLDVKAGKVPRLDHKYQILFYSYIMDRLGMNVKEAMLYYIAGKKLIRLQYSETEKRFVEKLIGWIREAMNSEVKIVQKK EKCENCGFFSYCKPRRVGKLYYTL
Sequences:
>Translated_184_residues MTISGVTVKHYAYCPHIVRLEALGFSERVSEAMLEGQLIDKEKEVSFLFTKYKEIIRKPVYRWKDLIGSPDFVLHAYNYY TPLDVKAGKVPRLDHKYQILFYSYIMDRLGMNVKEAMLYYIAGKKLIRLQYSETEKRFVEKLIGWIREAMNSEVKIVQKK EKCENCGFFSYCKPRRVGKLYYTL >Mature_183_residues TISGVTVKHYAYCPHIVRLEALGFSERVSEAMLEGQLIDKEKEVSFLFTKYKEIIRKPVYRWKDLIGSPDFVLHAYNYYT PLDVKAGKVPRLDHKYQILFYSYIMDRLGMNVKEAMLYYIAGKKLIRLQYSETEKRFVEKLIGWIREAMNSEVKIVQKKE KCENCGFFSYCKPRRVGKLYYTL
Specific function: Unknown
COG id: COG1468
COG function: function code L; RecB family exonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21828; Mature: 21697
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISGVTVKHYAYCPHIVRLEALGFSERVSEAMLEGQLIDKEKEVSFLFTKYKEIIRKPV CCCCCEEEEHHHHCCHHHHHHHCCCHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHH YRWKDLIGSPDFVLHAYNYYTPLDVKAGKVPRLDHKYQILFYSYIMDRLGMNVKEAMLYY HHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH IAGKKLIRLQYSETEKRFVEKLIGWIREAMNSEVKIVQKKEKCENCGFFSYCKPRRVGKL HHCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEE YYTL EECC >Mature Secondary Structure TISGVTVKHYAYCPHIVRLEALGFSERVSEAMLEGQLIDKEKEVSFLFTKYKEIIRKPV CCCCEEEEHHHHCCHHHHHHHCCCHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHH YRWKDLIGSPDFVLHAYNYYTPLDVKAGKVPRLDHKYQILFYSYIMDRLGMNVKEAMLYY HHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH IAGKKLIRLQYSETEKRFVEKLIGWIREAMNSEVKIVQKKEKCENCGFFSYCKPRRVGKL HHCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEE YYTL EECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA