Click here to switch to the map view.

The map label for this gene is 15920183

Identifier: 15920183

GI number: 15920183

Start: 17868

End: 18479

Strand: Direct

Name: 15920183

Synonym: ST0013

Alternate gene names: NA

Gene position: 17868-18479 (Clockwise)

Preceding gene: 15920182

Following gene: 15920184

Centisome position: 0.66

GC content: 35.46

Gene sequence:

>612_bases
ATGGAATTTAAAGTACTGATCAAAAACTTAACTTCCTTAACAATAGGAGGAGGAAGTACTATTGGAGCAGTAGACATTCC
ACTTAACCCCATGGTATTACCACCTTCAACGATAAAGGGAGTATTAAGAACGGCTATTCATAATTATTTACCAGAAGGTT
ATACATCATGCGGTAAAATAGAACCCAGTAAAATTAAAGAAGCACATGAGAAAAATGGCGTTTGTGATGTATGCAAACTC
TTTGGTTATCCAGATTACAAGGATTCTGGCTGTTTCACCGTAACAGTAAGAATTCCAGAGATTGTAAGAGGCAGGATTAC
TAGGGTAGAAATAAATGATAGAACACAAAGAAGTGAAGAAGGACATTTATTCACTCAAGAAGTAATTGCTCCAAATACCG
AATTTGAAGTTACCATATACTTTAGGGACTCATGCGGTGATAGAATGTTAAAACTATTACTATATTCTCTATTGGCATTA
AGGTTCTGGAGGATGGGTAGAAACGCTATGGTAGACGTTAAGTTAAAGGAAGATATTTGCCAAAAGGTTAAATGTGATGA
AGAGATGAAGAGTATAGTCTTCTCTCTATCAGATTATATATGGGGTGAGTAA

Upstream 100 bases:

>100_bases
TTCTTAAGAAATTAGTAGAAAGGAAGGAAGGTTCGTTAAAAGAAATCCCGCTTTATGATTACTACTTTATCCTTAAAACG
TTTAGGGTAGGTGTAGGATA

Downstream 100 bases:

>100_bases
GGTGAAATTCACATTACTCAGATTGACAGTCAACGGTTATATAACTACAAGAACTAAGAAAGTAGGAAATTATTATTTCT
CAGTTACAGATTATATACCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MEFKVLIKNLTSLTIGGGSTIGAVDIPLNPMVLPPSTIKGVLRTAIHNYLPEGYTSCGKIEPSKIKEAHEKNGVCDVCKL
FGYPDYKDSGCFTVTVRIPEIVRGRITRVEINDRTQRSEEGHLFTQEVIAPNTEFEVTIYFRDSCGDRMLKLLLYSLLAL
RFWRMGRNAMVDVKLKEDICQKVKCDEEMKSIVFSLSDYIWGE

Sequences:

>Translated_203_residues
MEFKVLIKNLTSLTIGGGSTIGAVDIPLNPMVLPPSTIKGVLRTAIHNYLPEGYTSCGKIEPSKIKEAHEKNGVCDVCKL
FGYPDYKDSGCFTVTVRIPEIVRGRITRVEINDRTQRSEEGHLFTQEVIAPNTEFEVTIYFRDSCGDRMLKLLLYSLLAL
RFWRMGRNAMVDVKLKEDICQKVKCDEEMKSIVFSLSDYIWGE
>Mature_203_residues
MEFKVLIKNLTSLTIGGGSTIGAVDIPLNPMVLPPSTIKGVLRTAIHNYLPEGYTSCGKIEPSKIKEAHEKNGVCDVCKL
FGYPDYKDSGCFTVTVRIPEIVRGRITRVEINDRTQRSEEGHLFTQEVIAPNTEFEVTIYFRDSCGDRMLKLLLYSLLAL
RFWRMGRNAMVDVKLKEDICQKVKCDEEMKSIVFSLSDYIWGE

Specific function: Unknown

COG id: COG1337

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23005; Mature: 23005

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFKVLIKNLTSLTIGGGSTIGAVDIPLNPMVLPPSTIKGVLRTAIHNYLPEGYTSCGKI
CCHHHEEHHHHEEEECCCCEEEEEECCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCC
EPSKIKEAHEKNGVCDVCKLFGYPDYKDSGCFTVTVRIPEIVRGRITRVEINDRTQRSEE
CHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEEEEEEECCHHHCCCEEEEEECCCCCCCCC
GHLFTQEVIAPNTEFEVTIYFRDSCGDRMLKLLLYSLLALRFWRMGRNAMVDVKLKEDIC
CCEEHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHH
QKVKCDEEMKSIVFSLSDYIWGE
HHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEFKVLIKNLTSLTIGGGSTIGAVDIPLNPMVLPPSTIKGVLRTAIHNYLPEGYTSCGKI
CCHHHEEHHHHEEEECCCCEEEEEECCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCC
EPSKIKEAHEKNGVCDVCKLFGYPDYKDSGCFTVTVRIPEIVRGRITRVEINDRTQRSEE
CHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEEEEEEECCHHHCCCEEEEEECCCCCCCCC
GHLFTQEVIAPNTEFEVTIYFRDSCGDRMLKLLLYSLLALRFWRMGRNAMVDVKLKEDIC
CCEEHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHH
QKVKCDEEMKSIVFSLSDYIWGE
HHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA