| Definition | Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence. |
|---|---|
| Accession | NC_003065 |
| Length | 214,233 |
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The map label for this gene is 159162009
Identifier: 159162009
GI number: 159162009
Start: 176512
End: 176823
Strand: Direct
Name: 159162009
Synonym: Atu8063
Alternate gene names: NA
Gene position: 176512-176823 (Clockwise)
Preceding gene: 159161995
Following gene: 159161996
Centisome position: 82.39
GC content: 49.36
Gene sequence:
>312_bases TTGGTGACAGGGCTAATATTCAATAGATCCCCCGACCCTCAATTAGTTTGGCTAAATAGAGCACAAGCTGCGCTTGGCGG CTGGCCATCAGTTCTTTTGAACGTTTTCGAACGGCGCCTGCTCAAAATTGCGAGCTTCGATCAGCGCTTCAATAATCGCA ATAGTCAGGCGCATGGTACAATAATCGGTGCTCCATCGATGACCTTCGGATGTCGAGCGCAGCAAATCCAGTCCCTGGCC GACACAATCTCCTCGGCCCGATTAATCGCCCATTCCATAAAGGTTTTTGAACCTGATCGTTTTTCCCGATAA
Upstream 100 bases:
>100_bases GATGTTCATCGGACTTCTTTTGGGGTATTGGCATTTTGCCCTGGTCGTTGACACTATCGCCACCCCGTGTCAGCGATACG CCCTGTCACCAACTTAACCT
Downstream 100 bases:
>100_bases CCACAACTATCCGTGTTGCCTCCGCATTTCTAGGACGGGAAGAAAAACAAGCAGTTAAGGCGCAGCGCGTCGTCCGCTGC ATGCCGGGTAACGCTATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MVTGLIFNRSPDPQLVWLNRAQAALGGWPSVLLNVFERRLLKIASFDQRFNNRNSQAHGTIIGAPSMTFGCRAQQIQSLA DTISSARLIAHSIKVFEPDRFSR
Sequences:
>Translated_103_residues MVTGLIFNRSPDPQLVWLNRAQAALGGWPSVLLNVFERRLLKIASFDQRFNNRNSQAHGTIIGAPSMTFGCRAQQIQSLA DTISSARLIAHSIKVFEPDRFSR >Mature_103_residues MVTGLIFNRSPDPQLVWLNRAQAALGGWPSVLLNVFERRLLKIASFDQRFNNRNSQAHGTIIGAPSMTFGCRAQQIQSLA DTISSARLIAHSIKVFEPDRFSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11525; Mature: 11525
Theoretical pI: Translated: 11.93; Mature: 11.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTGLIFNRSPDPQLVWLNRAQAALGGWPSVLLNVFERRLLKIASFDQRFNNRNSQAHGT CCEEEEECCCCCCCEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE IIGAPSMTFGCRAQQIQSLADTISSARLIAHSIKVFEPDRFSR EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVTGLIFNRSPDPQLVWLNRAQAALGGWPSVLLNVFERRLLKIASFDQRFNNRNSQAHGT CCEEEEECCCCCCCEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE IIGAPSMTFGCRAQQIQSLADTISSARLIAHSIKVFEPDRFSR EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA