Definition Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence.
Accession NC_003065
Length 214,233

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The map label for this gene is 159161992

Identifier: 159161992

GI number: 159161992

Start: 173878

End: 174306

Strand: Direct

Name: 159161992

Synonym: Atu6155

Alternate gene names: NA

Gene position: 173878-174306 (Clockwise)

Preceding gene: 16119971

Following gene: 159161993

Centisome position: 81.16

GC content: 55.24

Gene sequence:

>429_bases
GTGCAGCCTTTGGAAAAGAGGACGGTTTCGGAGCCTTGTCCATGCGCGGAAATAAACAGGCGAATACGGGGCCTGAAAAT
TCTCAAAGTGGCGATAGTGCAACGGCGCGGCCCGCCTCCGGGGTTGCGTTTTGCTGTCCGTGAACTGCAATGTCTCGAAG
CACCGGAGCGCGTGCGAATGAGCGCGTGGATCGCCTCATGGCGCTCGGAGCTTCAGGGGAATCCGCCGCCCTCAACACTT
CATACCAAACAGAAACATGGAGATGCCGAAAACGCCATCCTAGTGGAATCATCGTCCGCGCTGAGAGATTGCTTCTCATC
AAGCAGACGGGGCGACTGCAAGGCAGGGCTTGCTAGGCGACTGACTCCTCATCTCAAAGCTCAACGTAACAGCAATTCCA
TAGTATCGGAATGGCTTACCTTCTTTTAG

Upstream 100 bases:

>100_bases
CCACCCCTCTGGTTGCGATCTGGTGCAACACGGTGATGCAACGTCGACTGCACTGAACTAAAAAATGCAAAGGGATATCA
ATTGAGCCGATCTTCCCTGA

Downstream 100 bases:

>100_bases
TCAATCTAAATAGGATCACCTATGAAACTTATGCTACCCACCCTGTTTGGGATACTTTTGGCTACGGCTGCAAACGCTGC
CAATGATAGTCATGTACTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MQPLEKRTVSEPCPCAEINRRIRGLKILKVAIVQRRGPPPGLRFAVRELQCLEAPERVRMSAWIASWRSELQGNPPPSTL
HTKQKHGDAENAILVESSSALRDCFSSSRRGDCKAGLARRLTPHLKAQRNSNSIVSEWLTFF

Sequences:

>Translated_142_residues
MQPLEKRTVSEPCPCAEINRRIRGLKILKVAIVQRRGPPPGLRFAVRELQCLEAPERVRMSAWIASWRSELQGNPPPSTL
HTKQKHGDAENAILVESSSALRDCFSSSRRGDCKAGLARRLTPHLKAQRNSNSIVSEWLTFF
>Mature_142_residues
MQPLEKRTVSEPCPCAEINRRIRGLKILKVAIVQRRGPPPGLRFAVRELQCLEAPERVRMSAWIASWRSELQGNPPPSTL
HTKQKHGDAENAILVESSSALRDCFSSSRRGDCKAGLARRLTPHLKAQRNSNSIVSEWLTFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15999; Mature: 15999

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPLEKRTVSEPCPCAEINRRIRGLKILKVAIVQRRGPPPGLRFAVRELQCLEAPERVRM
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHH
SAWIASWRSELQGNPPPSTLHTKQKHGDAENAILVESSSALRDCFSSSRRGDCKAGLARR
HHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHH
LTPHLKAQRNSNSIVSEWLTFF
HCHHHHHCCCCHHHHHHHHHHC
>Mature Secondary Structure
MQPLEKRTVSEPCPCAEINRRIRGLKILKVAIVQRRGPPPGLRFAVRELQCLEAPERVRM
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHH
SAWIASWRSELQGNPPPSTLHTKQKHGDAENAILVESSSALRDCFSSSRRGDCKAGLARR
HHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHH
LTPHLKAQRNSNSIVSEWLTFF
HCHHHHHCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA