| Definition | Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence. |
|---|---|
| Accession | NC_003065 |
| Length | 214,233 |
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The map label for this gene is 159161992
Identifier: 159161992
GI number: 159161992
Start: 173878
End: 174306
Strand: Direct
Name: 159161992
Synonym: Atu6155
Alternate gene names: NA
Gene position: 173878-174306 (Clockwise)
Preceding gene: 16119971
Following gene: 159161993
Centisome position: 81.16
GC content: 55.24
Gene sequence:
>429_bases GTGCAGCCTTTGGAAAAGAGGACGGTTTCGGAGCCTTGTCCATGCGCGGAAATAAACAGGCGAATACGGGGCCTGAAAAT TCTCAAAGTGGCGATAGTGCAACGGCGCGGCCCGCCTCCGGGGTTGCGTTTTGCTGTCCGTGAACTGCAATGTCTCGAAG CACCGGAGCGCGTGCGAATGAGCGCGTGGATCGCCTCATGGCGCTCGGAGCTTCAGGGGAATCCGCCGCCCTCAACACTT CATACCAAACAGAAACATGGAGATGCCGAAAACGCCATCCTAGTGGAATCATCGTCCGCGCTGAGAGATTGCTTCTCATC AAGCAGACGGGGCGACTGCAAGGCAGGGCTTGCTAGGCGACTGACTCCTCATCTCAAAGCTCAACGTAACAGCAATTCCA TAGTATCGGAATGGCTTACCTTCTTTTAG
Upstream 100 bases:
>100_bases CCACCCCTCTGGTTGCGATCTGGTGCAACACGGTGATGCAACGTCGACTGCACTGAACTAAAAAATGCAAAGGGATATCA ATTGAGCCGATCTTCCCTGA
Downstream 100 bases:
>100_bases TCAATCTAAATAGGATCACCTATGAAACTTATGCTACCCACCCTGTTTGGGATACTTTTGGCTACGGCTGCAAACGCTGC CAATGATAGTCATGTACTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MQPLEKRTVSEPCPCAEINRRIRGLKILKVAIVQRRGPPPGLRFAVRELQCLEAPERVRMSAWIASWRSELQGNPPPSTL HTKQKHGDAENAILVESSSALRDCFSSSRRGDCKAGLARRLTPHLKAQRNSNSIVSEWLTFF
Sequences:
>Translated_142_residues MQPLEKRTVSEPCPCAEINRRIRGLKILKVAIVQRRGPPPGLRFAVRELQCLEAPERVRMSAWIASWRSELQGNPPPSTL HTKQKHGDAENAILVESSSALRDCFSSSRRGDCKAGLARRLTPHLKAQRNSNSIVSEWLTFF >Mature_142_residues MQPLEKRTVSEPCPCAEINRRIRGLKILKVAIVQRRGPPPGLRFAVRELQCLEAPERVRMSAWIASWRSELQGNPPPSTL HTKQKHGDAENAILVESSSALRDCFSSSRRGDCKAGLARRLTPHLKAQRNSNSIVSEWLTFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15999; Mature: 15999
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPLEKRTVSEPCPCAEINRRIRGLKILKVAIVQRRGPPPGLRFAVRELQCLEAPERVRM CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHH SAWIASWRSELQGNPPPSTLHTKQKHGDAENAILVESSSALRDCFSSSRRGDCKAGLARR HHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHH LTPHLKAQRNSNSIVSEWLTFF HCHHHHHCCCCHHHHHHHHHHC >Mature Secondary Structure MQPLEKRTVSEPCPCAEINRRIRGLKILKVAIVQRRGPPPGLRFAVRELQCLEAPERVRM CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHH SAWIASWRSELQGNPPPSTLHTKQKHGDAENAILVESSSALRDCFSSSRRGDCKAGLARR HHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHH LTPHLKAQRNSNSIVSEWLTFF HCHHHHHCCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA