Definition Dinoroseobacter shibae DFL 12 chromosome, complete genome.
Accession NC_009952
Length 3,789,584

Click here to switch to the map view.

The map label for this gene is polA

Identifier: 159045449

GI number:

Start: 3067301

End: 3070099

Strand: Reverse

Name: polA

Synonym: Dshi_2909

Alternate gene names: NA

Gene position: NA

Preceding gene: 159045450

Following gene: 159045448

Centisome position: NA

GC content: NA

Gene sequence:

>2799_bases
ATGGCATTCGGCAAGGGACATCACCTGCATCTGATCGACGGATCGGCGTTCATTTTCCGCGCCTATCACGCGTTGCCGCC
GCTGACACGGAAGTCCGACGGGCTGCCCGTCGGGGCGGTGTCGGGCTTCTGCAACATGCTGCAGCGCTATGTCGAAGGGA
ACGCCGGGGGCGACGTGACCCATGTGGCGGTGATCTTCGACAAGGGCAGCCATACCTTTCGCAATGATCTTTACGACCAG
TACAAGGCCAACCGCGAGGCGATGCCCGAGGACCTGCGCCCGCAGATCCCCCTGACCCGGACCGCGACCGAGGCGTTCAA
CATCGCCTGCAAGGAGATGGAGGGGTTCGAGGCGGACGATATCATCGCGACGCTGGCCTGCCAGGCGCGCGAGGCCGGGG
GGCGCTGCACGATCATCAGCTCGGACAAGGACCTGATGCAGCTGGTCGGCGGCGGGGTCGAGATGCTGGATGCGATGAAG
AACAAGACCATCGACGTGGACGGGGTGTTCGAGAAATTCGGCGTGGGCCCCGACCGGGTGGTCGATGTGCAGGCGCTGGC
CGGGGATTCGGTGGACAACGTGCCCGGCGCGCCGGGGATCGGGATCAAGACCGCGGCGCTGCTGATCAACGAGTATGGCT
CGCTCGAGGAGCTTCTGGACCGGGCCGGGGAGATCAAGCAGCCCAAGCGCCGCCAGACCCTGATCGAGCATCGCGCCCAG
ATCGAGCTGTCGAAGCGGCTGGTGCAGCTCGATTGCGACATGGAGCTGGATTTCACAATCGAGGATCTGGAGGTGCGCGA
TCCGGAGCCTGAGACCCTGCTGGGGTTTTTGGCGGAGATGGAGTTCCGCACGCTGACAAAGCGGATCTCGGGCGCGTTGG
GGGTGGAGGCGCCCGCCGTGCCGGAGCCCGCAGCGACGACGGCCTCGCCAGAGGCGGAGGAGCACCCCCCCCTGAGCGCC
TCGGAGCATGTCACCATCCGCGACGCGGAAACCCTGCAAAGCTGGATCGACGCGATCCATGCGCGCGGGGTGGTGGCGGT
GGATACCGAGACCACGGGCCTCAACGAGATGCGCGCGGATCTGGTGGGCGTGTCGCTCTGCGTGGATCCGGGGCGCGCGG
CCTACCTGCCGCTGGCGCACAAGGACGGTGGCGGGGCCGACGACCTGTTCGGCGGGGAGGCGAAGCTGGCCGAGGGGCAG
CTGGATTTTGAGACCGCGCTTGGGATGCTCAAGCCCGTGCTGGAGGACCCTGCGGTCCTGAAGATCGGGCAGAACATGAA
ATACGATGCCAAGATCCTCGCCCGGAACGGGATCACGGTGGCGCCCATCGACGACACGATGCTGCTGAGCTACGCGCTCC
ATGCCGGGTTGCACGGGCACGGGATGGACGCGCTGTCGGAGCGGTATCTCGACCACACGCCGATCCCGATCAAGACCCTG
CTGGGCACCGGCAAATCCGCGATCACTTTCGATTTCGTGCCCATCGAGGAGGCGACGAAATACGCCGCCGAGGATGCGGA
AATCACGCTGCGCCTGTGGCAGCGCTTGAAGCCGCGCCTGCATCTGGCGCAGGTCACCCGCGTCTACGAGTGGATGGAGC
GGCCCATGGTGCCGGTTCTGGCCGAGATGGAGATGCGCGGGATCAAGGTCGATCGCGACACCCTGAGCCGGATGTCGAAC
GCGTTCGCGCAGAAGATGGCCGGGCTGGAGGCGGAAATCCACGAACTGGCGGGGGAGAGTTTCAACGTGGGCAGCCCCGC
CCAGCTGGGCGAGATCCTGTTCGAGAAGATGGGCTTCGAGGGGGGCAAGACCGGCAAGTCGGGCAAGTATTCGACCCCGG
CGGATGTGCTGGAGGATCTCGCGACCGAGCATGACCTGCCGCGCCGGGTGCTCGACTGGCGGCAGCTGTCGAAGTTGAAA
TCGACCTACACGGACGCCTTGCAGGATCATATCAACCCCGAGACCGGGCGGGTGCATACGTCCTACTCGATTGCCGGGGC
GAATACGGGGCGGTTGGCTTCGACCGATCCGAACCTGCAGAACATCCCCGTGCGCTCCGAGGAGGGGCGGCGCATTCGCG
AGGCCTTCGTGGCGGAGCCGGGGCATGTGCTCGTGTCGCTCGACTATAGCCAGATCGAGCTGCGGATCCTCGCCCATATC
GCCGGGATCGACGCGCTGAAGACCGCGTTCCGGGACGGGCTGGACATTCATGCGATGACCGCGTCGGAGATGTTCGATGT
GCCGCTGGACGAGATGACGCCGGAGGTGCGGCGCCAGGCCAAGGCGATCAATTTCGGGGTGATCTACGGGATTTCGGGCT
TTGGCCTCGCGCGGAACCTGCGGATCCCGCGGGCGGAGGCGCAGGCCTTCATCGACACCTATTTCGAGCGGTTCCCCGGC
ATCCGGGCCTATATGGACGACACGGTCGCCTTCGCGAAGGAGCATAAATACGTGCAGACCCTGTTCGGGCGGAAGATCCA
CACGCCGGAGATCGGCGCGAAGGGGCCCCAGGCGGGCTTCGCCAAGCGCGCGGCGATCAACGCGCCGATCCAGGGAACGG
CGGCGGATATCATCCGGCGCGCGATGGTGCGGATGCCCGCGGCGATTGCCGACCTGCCCGCGCGGATGCTGCTCCAGGTC
CATGACGAGCTGATCTTCGAGGTGGAGGAAGACGCGGTGGACCGGGTGATCCCGGCGGTGCGCCAGGTGATGGAGGGGGC
CGCCGCGCCGGTGGTGCATCTCGATGTGCCGCTGACGGTGGATGCGGGCCAGGGGCGAAGCTGGGCGGAGGCGCATTAG

Upstream 100 bases:

>100_bases
TGTCCACATGGTCCAGACCGCCGCCCCGGTCACCTGACCCCTCGCCAATTCCACGGCAAGGCTATATCGCTGTCCACGTA
GTGCGACGAGGGGGCAAGGC

Downstream 100 bases:

>100_bases
GGCGCCGGTGGCGCGGGCCAACGGCTTTCGAAAGCCGTTGAGCGGCCCGGCGGCTGCCGGAGGCGCACCGCCAGCCGGGA
GGCGCGGCGGTCGGGCCAGC

Product: DNA polymerase I

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>932_residues
MAFGKGHHLHLIDGSAFIFRAYHALPPLTRKSDGLPVGAVSGFCNMLQRYVEGNAGGDVTHVAVIFDKGSHTFRNDLYDQ
YKANREAMPEDLRPQIPLTRTATEAFNIACKEMEGFEADDIIATLACQAREAGGRCTIISSDKDLMQLVGGGVEMLDAMK
NKTIDVDGVFEKFGVGPDRVVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGSLEELLDRAGEIKQPKRRQTLIEHRAQ
IELSKRLVQLDCDMELDFTIEDLEVRDPEPETLLGFLAEMEFRTLTKRISGALGVEAPAVPEPAATTASPEAEEHPPLSA
SEHVTIRDAETLQSWIDAIHARGVVAVDTETTGLNEMRADLVGVSLCVDPGRAAYLPLAHKDGGGADDLFGGEAKLAEGQ
LDFETALGMLKPVLEDPAVLKIGQNMKYDAKILARNGITVAPIDDTMLLSYALHAGLHGHGMDALSERYLDHTPIPIKTL
LGTGKSAITFDFVPIEEATKYAAEDAEITLRLWQRLKPRLHLAQVTRVYEWMERPMVPVLAEMEMRGIKVDRDTLSRMSN
AFAQKMAGLEAEIHELAGESFNVGSPAQLGEILFEKMGFEGGKTGKSGKYSTPADVLEDLATEHDLPRRVLDWRQLSKLK
STYTDALQDHINPETGRVHTSYSIAGANTGRLASTDPNLQNIPVRSEEGRRIREAFVAEPGHVLVSLDYSQIELRILAHI
AGIDALKTAFRDGLDIHAMTASEMFDVPLDEMTPEVRRQAKAINFGVIYGISGFGLARNLRIPRAEAQAFIDTYFERFPG
IRAYMDDTVAFAKEHKYVQTLFGRKIHTPEIGAKGPQAGFAKRAAINAPIQGTAADIIRRAMVRMPAAIADLPARMLLQV
HDELIFEVEEDAVDRVIPAVRQVMEGAAAPVVHLDVPLTVDAGQGRSWAEAH

Sequences:
NA

Specific function: NA

COG id: COG0749

COG function: function code L; DNA polymerase I - 3'-5' exonuclease and polymerase domains

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA