Definition Dinoroseobacter shibae DFL 12 chromosome, complete genome.
Accession NC_009952
Length 3,789,584

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Identifier: 159045390

GI number:

Start: 3007134

End: 3008669

Strand: Reverse

Name: Not Available

Synonym: Dshi_2850

Alternate gene names: NA

Gene position: NA

Preceding gene: 159045391

Following gene: 159045389

Centisome position: NA

GC content: NA

Gene sequence:

>1536_bases
ATGACCCTCCCCGCCATCCAGTTCTCCGACGATCAGGCAGATGCCTATGACCGCGTGGCCGACGCTCTGGCCGCCGCCGG
GGTGGACCTGGCCGACGAGACGCTGATGCCCCCGCGGGAGGGGGCGGCGTCCTCGGTGCTGGCGGTTCTGGGCAAGGCGG
GGTCCGGCAAGACGCTGCTCCTGGCGCGGCTGGCGGAGGATCTGATCCGGGCCGGGGTCGAGATCGTCTCGGGCGACTGG
GAGGGGCGGCGGCGCAAGGACCGGCGCACCCTGGCGATCCTGGCGCCGACCAACAAGGCCGCCTGGGTGCTGCGGATGCG
GGGGGTGCCGGCGACGACCATTCACCGGATCCTCTACACCCCGGTCTACGATCCGGAATACGAAAAGATCGCCGAATGGC
TCGCGGGCAGCGGCGACCGGCCGGTGGTCGAGGGGCTGTCGGAGGCCGCGCTGGACCGGGCCAAGGCATTTTTCGAGGCG
CAGAAATCGGTGCCCGGGGCGCTGGCGGCGGCGGGGCTGCGGGGGTCGGATTTCATCACCGGCTGGAAGCGGCGCGAGGA
CCCGTTGGACATTGGATTCGTGGACGAATCCTCGATGCTCGACGCGCGCCAGCTCGACGATCTGCGCGAGATCTTCCCCA
CGCTGTGCCTGTTCGGCGACCCCGCACAGCTCGCCCCCGTGGGCCAGTCGGGCCAGATGGTGTTCGAGACCCTGCCCGCG
GAGCGGCAGCTGACCCTGAGCCGGGTGCACCGGCAGGCCAAGGACAACCCGATCCTCGATCTCGCCCATGCGCTGGCCGA
CCCGGAGGTGGATTTCAACCGGTTCGAGCGGATGGTCGAAGAGGCTGCGTCCCGCGACGACCGGGTGGTGGTGCAGGGCC
GGGTGGAGGCGGCGCTGATGGCGCGGTCTCCGGCGCTGGTCTGGCGCAACGCGACGCGGATCCGGATGATCCATGCGTTC
CGGGCGGCTTACGGTGCGCCGCCGGATGCGCTGCTGGAGGGCGAGCCGCTGATCTGTGACGGGATCGAGTTGCCGCTGAA
GCATCGCAAGAAGCGGATCGACCTGGAGGCGCGGGGGCTGATCAAGGGGGCGCAGGTGATCTATCTCGGGCCCGGTCGCA
AGCCCGGGTTTTCCAAGCTGCATGTGGTGGGCGCCGAGGCGCCCGAGGTCAGCGCCGCCTCGATCGTGAAGATCGAGATG
CCCGACGAGGAGGAGCCGTTCATCCCCTATGCTGCGCGGATGGGGGCGACGTTTCTGCACGGGGCGGCGGTGACGATCCA
CAAGGCGCAGGGCAGCCAGTGGGACACGGTGCAGGTCTTCGCGCCGGACCTGTCGGCGGCGGCCTGGGCCGGGCGGGTGG
AGGCGGGGCAACCGTTGTGGAAGCGGCTGGCCTACGTGGCGATCACCCGGGCGCAGGAGCGGCTGATCTGGGTGACGCGG
GCACGGCTGGCGCGGCCGGACGCCCCCCTTGGCACGGCGGATCTGAAGGCGGCGCCTGCGCCGCTGGTGTTGGAGCAGGA
GGAGGTGGAGCCATGA

Upstream 100 bases:

>100_bases
GTCTCCGCCCATTGGTACGAACGCGCGTTTGGCCCCAGCTTGGCGGCCTGAGGGGGCATTCGCGCTGGCGGGGAGGGAAC
GGGTGGTTTAGCGTTTCGCC

Downstream 100 bases:

>100_bases
GCGGGACGATCCTGATCACCGGGGCGAGCGGCGGCATCGGGGCCGCCGTGGCCGACAGGTTCCTGGCCGAGGGCTGGGAG
GTCGGGCTTCTGGCGCGGCG

Product: putative ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>511_residues
MTLPAIQFSDDQADAYDRVADALAAAGVDLADETLMPPREGAASSVLAVLGKAGSGKTLLLARLAEDLIRAGVEIVSGDW
EGRRRKDRRTLAILAPTNKAAWVLRMRGVPATTIHRILYTPVYDPEYEKIAEWLAGSGDRPVVEGLSEAALDRAKAFFEA
QKSVPGALAAAGLRGSDFITGWKRREDPLDIGFVDESSMLDARQLDDLREIFPTLCLFGDPAQLAPVGQSGQMVFETLPA
ERQLTLSRVHRQAKDNPILDLAHALADPEVDFNRFERMVEEAASRDDRVVVQGRVEAALMARSPALVWRNATRIRMIHAF
RAAYGAPPDALLEGEPLICDGIELPLKHRKKRIDLEARGLIKGAQVIYLGPGRKPGFSKLHVVGAEAPEVSAASIVKIEM
PDEEEPFIPYAARMGATFLHGAAVTIHKAQGSQWDTVQVFAPDLSAAAWAGRVEAGQPLWKRLAYVAITRAQERLIWVTR
ARLARPDAPLGTADLKAAPAPLVLEQEEVEP

Sequences:
NA

Specific function: NA

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA