| Definition | Dinoroseobacter shibae DFL 12 chromosome, complete genome. |
|---|---|
| Accession | NC_009952 |
| Length | 3,789,584 |
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The map label for this gene is phrB
Identifier: 159044861
GI number:
Start: 2449473
End: 2450903
Strand: Reverse
Name: phrB
Synonym: Dshi_2318
Alternate gene names: NA
Gene position: NA
Preceding gene: 159044862
Following gene: 159044860
Centisome position: NA
GC content: NA
Gene sequence:
>1431_bases ATGAGCAGTCAGACCGACAGGGCGCCGGTGATCTGGTGGGTGCGCCGGGACCTCCGGCTGAGCGACAACCGGGCGCTTGT GGCGGCGGTCGAGACCGGTGCGCCGGTGATCCCGGTCTTCCTCTGCGATCCCATTCTCGACAGCCTCGGCGCGGCTCCCA AATGGCGCTTCGGGCTCGGGGCGGCGGCGCTGGACGCAGCCCTTCGGGACCGCGGCTCGCGGCTGATCTACCGCAAAGGC GACGCGCTCGAAACCCTGCGCGCTCTGGTGTCGGAAACCGGTGCCGAGACCGTCTACTGGAGCCGCGCCTACGACCCCGA CCAGGTCGCCCGCGACAAGGCCGTCAAATCCGGGTTGCAGGACGACGGCGTGGACGCGCGCAGCTTCACCGGGCACCTGT TGATTGAGCCTTGGACGGTCGAGACCGGCTCGGGCGGGTTCTACAAGGTCTACACACCGTTCTGGAAAGCGGTCCGTGAC CGCGCCATGCCCGAGCCGCAGCCCGCCCCCGACCGCATCCCCGCCCCCGACAACTGGCCCGAGAGCGACCGGCTCGACTA CTGGGCACTGGGGGCCGCCATGAACCGCGGCGCGGCCATCGTAGCGCCGCATCTCGCCATCGGTGAGGACGCGGCCCGCG GTCGGCTCGGCGCATTCATCGCCCACCGGGTCGGGGATTACGACCGCGCCCGCGACATCCCCGGCATCGAAGGCACCTCG CGCCTGTCGGAAAACCTCACCTATGGCGAGATCGGCCCCGCCACCTGCTGGCAAGCGGGCCAGCGCGCGCTGGCCGAGGG CAAGGCCGGGGCGGAGACCTTCCTCAAGGAGCTTGTCTGGCGCGAGTTCGCCTATCACCTGGTCTGGCACACGCCCCACC TGATCGAGAAGAACTGGCGCGCGGAGTGGGACCACTTCCCCTGGCGCGATGACAATGCGGACGCAGAGACCTGGCGCCGG GGCCGCACGGGCATCCGGTTTGTCGATGCGGCCATGCGCGAGATGTATGTCACCGGCACCATGCACAACCGCGGCCGGAT GATCGTGGCCTCTTACCTCACCAAGCACCTGATGACCCATTGGCGGGTCGGGCAGGCGTGGTTCGATGATTGCCTGGTGG ATTGGGACCCGGCCTCCAACGCCATGGGCTGGCAATGGGCGGCGGGCTCCGGCCCTGACGCCGCGCCCTATTTCCGCGTG TTCAACCCCGACACCCAGCTCGACAAATTCGACCGCGACCAGTCCTACCAACGCCGTTTCATCGCCGAAGGGCAGGGCAC GCCGCCCGAGGATGCGCGCGCGTATTTCGATGCGATCCCGCGCAGCTGGGGTCTGTCGCCCGACGACGCCTACCCGGATC CGATCGTACCGCTGGACGAAGGCCGCAAGCGCGCCCTCGACGCCTACCAGGCGCGCAAGGATGCTGCATAA
Upstream 100 bases:
>100_bases CGACTGGGTCTTGTGGTTGCATGCGCGGCACCTTTGCTTGACCTGCCGCGCGCCTGCGCCATCTCCGGCAGGGAGGACGA CACAGGACAGGACAGTGGAG
Downstream 100 bases:
>100_bases TTGACACCGGGCCTGTAAACCCCCTAGGACGAAGCCGACACGCCCTTGAAACACCGCCCTTTTCGCGGCGTTACTGCGGC GGACAGTTGAGGATAAAGAT
Product: deoxyribodipyrimidine photo-lyase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>476_residues MSSQTDRAPVIWWVRRDLRLSDNRALVAAVETGAPVIPVFLCDPILDSLGAAPKWRFGLGAAALDAALRDRGSRLIYRKG DALETLRALVSETGAETVYWSRAYDPDQVARDKAVKSGLQDDGVDARSFTGHLLIEPWTVETGSGGFYKVYTPFWKAVRD RAMPEPQPAPDRIPAPDNWPESDRLDYWALGAAMNRGAAIVAPHLAIGEDAARGRLGAFIAHRVGDYDRARDIPGIEGTS RLSENLTYGEIGPATCWQAGQRALAEGKAGAETFLKELVWREFAYHLVWHTPHLIEKNWRAEWDHFPWRDDNADAETWRR GRTGIRFVDAAMREMYVTGTMHNRGRMIVASYLTKHLMTHWRVGQAWFDDCLVDWDPASNAMGWQWAAGSGPDAAPYFRV FNPDTQLDKFDRDQSYQRRFIAEGQGTPPEDARAYFDAIPRSWGLSPDDAYPDPIVPLDEGRKRALDAYQARKDAA
Sequences:
NA
Specific function: NA
COG id: COG0415
COG function: function code L; Deoxyribodipyrimidine photolyase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA